BAC Information

Click to search

BAC

Clone NameB6Ng01-124J06
Chromosome7 (Build37)
Map Location 132,772,797 - 132,865,139
singlet/doubletdoublet
Overlap geneIl21r, Gtf3c1, D430042O09Rik
Upstream geneEG545999, LOC670828, 4933440M02Rik, LOC100043014, Jmjd5, Nsmce1, EG244214, Il4ra
Downstream geneGsg1l, Xpo6, Sbk1, LOC100043495, Lat, 2210013K02Rik, Nfatc2ip, Cd19, Rabep2, Atp2a1, Sh2b1, Tufm, Atxn2l, Eif3s8, Cln3, Apob48r, Il27, Nupr1, Ccdc101, Sult1a1, LOC629029, Giyd2, Bola2, Coro1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124J06.bB6Ng01-124J06.g
ACCDH927450DH927451
length1,242942
definitionDH927450|Mus musculus domesticus DNA, BAC clone: B6Ng01-124J06, 5' end.DH927451|Mus musculus domesticus DNA, BAC clone: B6Ng01-124J06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(132,863,867 - 132,865,139)(132,772,797 - 132,773,738)
sequence
gaattcagtggtgacaaatgcaccaacaactgtttcttagctaagtctct
ggtggcactaacttgagggctaaggttactgaatggctagagaagataag
gaggggaaatggggaaagattaaaggccagtcaagacctgtcccatggtg
gctggagatcctttccctagcactgactctacctaccagcatgatggctt
ttggaattctttacgttcaaccacaaagctccaggtcaaagaaatcaaac
gacttgcctagggtcccagagccagcaggggaatctgacaagtgtgccag
cttagtctcaagatccagtgccaactctactcaaggcccacacccctctg
cccacttcaacttactgagtgcctctgaaccctaattctggcttctccct
actgcactgtaaacacacaggtcagagtcaagtagataaaacagcagcat
ggcaggactagaacagagtgaagagcagctgaccggcctgaggtgcttag
ctccaaagactggtttctacgtaggtatgtgggccttttcctgctatcat
tctgtgtatgtgcttttgctttgttgttaaagactctgtaacccagtctg
accttgaactctgggtaatcttcttgcctcagtttccccagcactgagat
tacaggtgcatactaccacacctggcttgttttgtcagttttggtttttc
cagagataccaaggagcaacatttctttacttctaaatccatgagtccct
tttgaggatacttaagggtctgccagaaatccactagacagagcaggagg
caggtgaaggctcccttgctcccgtgtaccttcaggtagagctgggcctt
tcagctatgcttccttttcagcacactgaaagccggaaaccatattcctg
tcactcttgcttcgcatttttcttgtaactagaattcccagggcccagct
tactgccaaattacctgagataacaagtcatgctaagacccttcctctct
ctccaaatccaaatcacagctggcagctggaggtggtatttatagctgcc
agatccttgcactggcgtgcagttttctacccagatgctgaaggcagtca
gacagaatatatgcctgcactgccagcctggtgccagggtctcacgtcaa
tgggaactgtccgtccgtaatccactcgacacagactgagaatacgacca
ttagatggttaacttacgctgggagaggtcgtgtcctcctgg
gaattccagtcaaggtcacacttaactggaataagaatgaaatacctgat
ttaatcaatttaatagagtaaagggttattttagcttatggtttcagaag
gtttggctcatgattgcaaagccctgttgcattgttggggggcttacatc
atggtggtcaggacataaagaaggtgcaagggctgggatgccaatacccc
ttcagtgtgtctctaatggcctaacctcctccaactagaccctgacttct
aaatgtcccactaccttccagtaacataccaggctaggaccagaagcctt
tgggggaagggtcatttcatacccaaactccaaagggagggatcagaacc
cagcttccttccagccccccctgccccaccccaccatccccagcacaccc
acccatgttttctgggagacttttctgttggacccacggtttgctctctg
tgcagagcccgaggcaggctgggaccctcacatgctgctgctcctggctg
tcttgatcattgtcctggttttcatgggtctgaagatccacctgccttgg
aggtgaggccaggggctcagggaggcagagaaggggtcagcctgggtcac
agtatctccaacctagacctactttggccaggggacgtggtgagagcact
gatgctaatgaatagtgtgtgtgttccatgtgctagctagacactgtgca
gaacttccaccccaggtccatggctaccctgtaaactttggcacactcca
aatggagaaaactaaagcacagaacagtcaagccacttgcccaaagtcac
acaatcatgaagtggcgagggtatggggtagaaactttgttcttgtggag
acttcagttgtgactttgtccagcaaatgaactttgaggcttaggggaaa
gtcacgcatcccctccccagccctctgttcagcttgaaggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_132863867_132865139
seq2: B6Ng01-124J06.b_45_1286 (reverse)

seq1  CCAGGAGGGACATAAAC-CTCCCAGCGTATAGGTTTATACACTCTTTATA  49
      |||||| |||||  | | ||||||||||| ||  |||   ||  | ||  
seq2  CCAGGA-GGACACGACCTCTCCCAGCGTA-AG--TTA---ACCATCTAAT  43

seq1  GGTTTCTGTATATCCTTTCATGTCTGTGTC-AGTGGATTTCAGTGAAACG  98
      |||    ||||    | ||| ||||||||| |||||||| | |    |||
seq2  GGT---CGTAT----TCTCA-GTCTGTGTCGAGTGGATTACGG----ACG  81

seq1  GTGACCAGTCCCATTGACAGGTAGACCCTGCCACCCAGTGCTGGCAGTTG  148
        |||   |||||||||| |  |||||||| || |||| |||||||| ||
seq2  --GACAGTTCCCATTGAC-GTGAGACCCTGGCA-CCAG-GCTGGCAG-TG  125

seq1  CAGCCAT-TATTCTGTCTTGGCCTGCTCTCAGCCATCTGGGTATGAAACT  197
      ||| ||| ||||||||||  | ||||  |||| ||||||||||  |||||
seq2  CAGGCATATATTCTGTCT--GACTGCCTTCAG-CATCTGGGTAGAAAACT  172

seq1  GCACGCCAGTGCAAAGAATTCTGTGCAGGCTATAAATAACCACTTCCAGC  247
      |||||||||||||| ||  |||| ||| ||||||||| ||||| ||||||
seq2  GCACGCCAGTGCAAGGA--TCTG-GCA-GCTATAAAT-ACCACCTCCAGC  217

seq1  TGCCAGCTGTGATTTGGATTTGGAGAGGAGAGG-AGGGTCTTAGCATGAC  296
      |||||||||||||||||||||||||| |||||| ||||||||||||||||
seq2  TGCCAGCTGTGATTTGGATTTGGAGA-GAGAGGAAGGGTCTTAGCATGAC  266

seq1  TTGTTTATCTCAGGTAATTTGGCAGTAAGCTGGGCCCTGGGAATTCTAGT  346
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTG-TTATCTCAGGTAATTTGGCAGTAAGCTGGGCCCTGGGAATTCTAGT  315

seq1  TACAAGAAAAATGCGAAGCAAGAGTGACAGGAATATGGTTTCCGGCTTTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGAAAAATGCGAAGCAAGAGTGACAGGAATATGGTTTCCGGCTTTC  365

seq1  AGTGTGCTGAAAAGG-AGCATAGCTGAAAGGCCCAGCTCTACCTGAGGGT  445
      ||||||||||||||| |||||||||||||||||||||||||||||| |||
seq2  AGTGTGCTGAAAAGGAAGCATAGCTGAAAGGCCCAGCTCTACCTGAAGGT  415

seq1  ACACGGGAGCAAGGGAGCCTTCACCTGCCTCCTGCTCTTGTCTAGTGGAT  495
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACACGGGAGCAAGGGAGCCTTCACCTGCCTCCTGCTC-TGTCTAGTGGAT  464

seq1  TTCTGGCAGACCCTTAAGTATCCTCAAAAGGGACTCATGGATTTAGAAGT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGCAGACCCTTAAGTATCCTCAAAAGGGACTCATGGATTTAGAAGT  514

seq1  AAAGAAATGTTGCTCCTTGGTATCTCTGGAAAAACCAAAACTGACAAAAC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATGTTGCTCCTTGGTATCTCTGGAAAAACCAAAACTGACAAAAC  564

seq1  AAGCCAGGTGTGGTAGTATGCACCTGTAATCTCAGTGCTGGGGAAACTGA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAGGTGTGGTAGTATGCACCTGTAATCTCAGTGCTGGGGAAACTGA  614

seq1  GGCAAGAAGATTACCCAGAGTTCAAGGTCAGACTGGGTTACAGAGTCTTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGAAGATTACCCAGAGTTCAAGGTCAGACTGGGTTACAGAGTCTTT  664

seq1  AACAACAAAGCAAAAGCACATACACAGAATGATAGCAGGAAAAGGCCCAC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAAAGCAAAAGCACATACACAGAATGATAGCAGGAAAAGGCCCAC  714

seq1  ATACCTACGTAGAAACCAGTCTTTGGAGCTAAGCACCTCAGGCCGGTCAG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTACGTAGAAACCAGTCTTTGGAGCTAAGCACCTCAGGCCGGTCAG  764

seq1  CTGCTCTTCACTCTGTTCTAGTCCTGCCATGCTGCTGTTTTATCTACTTG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTTCACTCTGTTCTAGTCCTGCCATGCTGCTGTTTTATCTACTTG  814

seq1  ACTCTGACCTGTGTGTTTACAGTGCAGTAGGGAGAAGCCAGAATTAGGGT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGACCTGTGTGTTTACAGTGCAGTAGGGAGAAGCCAGAATTAGGGT  864

seq1  TCAGAGGCACTCAGTAAGTTGAAGTGGGCAGAGGGGTGTGGGCCTTGAGT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGCACTCAGTAAGTTGAAGTGGGCAGAGGGGTGTGGGCCTTGAGT  914

seq1  AGAGTTGGCACTGGATCTTGAGACTAAGCTGGCACACTTGTCAGATTCCC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTGGCACTGGATCTTGAGACTAAGCTGGCACACTTGTCAGATTCCC  964

seq1  CTGCTGGCTCTGGGACCCTAGGCAAGTCGTTTGATTTCTTTGACCTGGAG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGGCTCTGGGACCCTAGGCAAGTCGTTTGATTTCTTTGACCTGGAG  1014

seq1  CTTTGTGGTTGAACGTAAAGAATTCCAAAAGCCATCATGCTGGTAGGTAG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGGTTGAACGTAAAGAATTCCAAAAGCCATCATGCTGGTAGGTAG  1064

seq1  AGTCAGTGCTAGGGAAAGGATCTCCAGCCACCATGGGACAGGTCTTGACT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGTGCTAGGGAAAGGATCTCCAGCCACCATGGGACAGGTCTTGACT  1114

seq1  GGCCTTTAATCTTTCCCCATTTCCCCTCCTTATCTTCTCTAGCCATTCAG  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTTAATCTTTCCCCATTTCCCCTCCTTATCTTCTCTAGCCATTCAG  1164

seq1  TAACCTTAGCCCTCAAGTTAGTGCCACCAGAGACTTAGCTAAGAAACAGT  1245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTTAGCCCTCAAGTTAGTGCCACCAGAGACTTAGCTAAGAAACAGT  1214

seq1  TGTTGGTGCATTTGTCACCACTGAATTC  1273
      ||||||||||||||||||||||||||||
seq2  TGTTGGTGCATTTGTCACCACTGAATTC  1242

seq1: chr7_132772797_132773738
seq2: B6Ng01-124J06.g_69_1010

seq1  GAATTCCAGTCAAGGTCACACTTAACTGGAATAAGAATGAAATACCTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTCAAGGTCACACTTAACTGGAATAAGAATGAAATACCTGAT  50

seq1  TTAATCAATTTAATAGAGTAAAGGGTTATTTTAGCTTATGGTTTCAGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCAATTTAATAGAGTAAAGGGTTATTTTAGCTTATGGTTTCAGAAG  100

seq1  GTTTGGCTCATGATTGCAAAGCCCTGTTGCATTGTTGGGGGGCTTACATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGCTCATGATTGCAAAGCCCTGTTGCATTGTTGGGGGGCTTACATC  150

seq1  ATGGTGGTCAGGACATAAAGAAGGTGCAAGGGCTGGGATGCCAATACCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGGTCAGGACATAAAGAAGGTGCAAGGGCTGGGATGCCAATACCCC  200

seq1  TTCAGTGTGTCTCTAATGGCCTAACCTCCTCCAACTAGACCCTGACTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGTGTCTCTAATGGCCTAACCTCCTCCAACTAGACCCTGACTTCT  250

seq1  AAATGTCCCACTACCTTCCAGTAACATACCAGGCTAGGACCAGAAGCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCCCACTACCTTCCAGTAACATACCAGGCTAGGACCAGAAGCCTT  300

seq1  TGGGGGAAGGGTCATTTCATACCCAAACTCCAAAGGGAGGGATCAGAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGAAGGGTCATTTCATACCCAAACTCCAAAGGGAGGGATCAGAACC  350

seq1  CAGCTTCCTTCCAGCCCCCCCTGCCCCACCCCACCATCCCCAGCACACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTCCTTCCAGCCCCCCCTGCCCCACCCCACCATCCCCAGCACACCC  400

seq1  ACCCATGTTTTCTGGGAGACTTTTCTGTTGGACCCACGGTTTGCTCTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATGTTTTCTGGGAGACTTTTCTGTTGGACCCACGGTTTGCTCTCTG  450

seq1  TGCAGAGCCCGAGGCAGGCTGGGACCCTCACATGCTGCTGCTCCTGGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGCCCGAGGCAGGCTGGGACCCTCACATGCTGCTGCTCCTGGCTG  500

seq1  TCTTGATCATTGTCCTGGTTTTCATGGGTCTGAAGATCCACCTGCCTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGATCATTGTCCTGGTTTTCATGGGTCTGAAGATCCACCTGCCTTGG  550

seq1  AGGTGAGGCCAGGGGCTCAGGGAGGCAGAGAAGGGGTCAGCCTGGGTCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAGGCCAGGGGCTCAGGGAGGCAGAGAAGGGGTCAGCCTGGGTCAC  600

seq1  AGTATCTCCAACCTAGACCTACTTTGGCCAGGGGACGTGGTGAGAGCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCTCCAACCTAGACCTACTTTGGCCAGGGGACGTGGTGAGAGCACT  650

seq1  GATGCTAATGAATAGTGTGTGTGTTCCATGTGCTAGCTAGACACTGTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTAATGAATAGTGTGTGTGTTCCATGTGCTAGCTAGACACTGTGCA  700

seq1  GAACTTCCACCCCAGGTCCATGGCTACCCTGTAAAC-TTGGCACACTCCA  749
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GAACTTCCACCCCAGGTCCATGGCTACCCTGTAAACTTTGGCACACTCCA  750

seq1  AATGGAGAAAACTAAAGCACAGAACAGTCAAGCCACTTGCCCAAAGTCAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGAAAACTAAAGCACAGAACAGTCAAGCCACTTGCCCAAAGTCAC  800

seq1  ACAATCATGAAGTGGCGAGGGTATGGGGTAGAAACTTTGTTCTTTGTGGA  849
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ACAATCATGAAGTGGCGAGGGTATGGGGTAGAAACTTTGTTC-TTGTGGA  849

seq1  GACTTCAGTTGTGACTTTGTCCAGCAAATGAACTTTGAGGCTGAGGGGAT  899
      |||||||||||||||||||||||||||||||||||||||||| |||||| 
seq2  GACTTCAGTTGTGACTTTGTCCAGCAAATGAACTTTGAGGCTTAGGGGAA  899

seq1  AGTCACGCATCCCCTCCCCAGCCCTCTGTTCAGCTGGAAGGTA  942
      ||||||||||||||||||||||||||||||||||| |||||||
seq2  AGTCACGCATCCCCTCCCCAGCCCTCTGTTCAGCTTGAAGGTA  942