BAC Information

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BAC

Clone NameB6Ng01-124M20
Chromosome7 (Build37)
Map Location 142,783,214 - 142,885,677
singlet/doubletdoublet
Overlap genePtpre, Mki67
Upstream geneLOC668750, Dock1, B830028B13Rik, EG668693, LOC100043254, Foxi2, Clrn3
Downstream geneLOC668764, LOC546009
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124M20.bB6Ng01-124M20.g
ACCDH927612DH927613
length1,086978
definitionDH927612|Mus musculus domesticus DNA, BAC clone: B6Ng01-124M20, 5' end.DH927613|Mus musculus domesticus DNA, BAC clone: B6Ng01-124M20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(142,884,573 - 142,885,677)(142,783,214 - 142,784,189)
sequence
gaattccatgtataactaatttgaagagttaaacagggaacaggtggcca
gtgttgttctgtgtatgtgacagtgtctattaaggatgcaggtgctgcta
aggtttatctatccttgagatggaatgaaacagggaggtcaccatggcac
ccttcaaagattgccgggccttgtaccttaatgatctttaaaggatcagc
agttcatttactgcctttgtgatgggcattcttcagtagtatgaactgga
atgtttttgatatgcattatgattgacatcctggaattataatttgttag
tatgtattctttttccataggaacaaagtagccaaggcattgccttgaat
atcatagataactcttagcaaattaatcaatataaaatttgttattttct
ctttttatatttttgcttcttttttttttttcctgatggatcttttagat
ttcactaattttgtggttgtcttctcattcccttacaaaacaccccagaa
ctctaggtaccgaaagaaaaccaatgtaaaacagccaaggcccaagtttg
atgcatctgcagagaatgtcgggataaagaaaaacgagaagactatgaag
actgcctcccaggagacagagctgcagaatccagatgatggagccaagaa
atctacatctcggggccaagtcagtgggaaaagaacatgcttgaggtcta
gaggaacgactgagatgccccagccttgtgaagcagaagagaaaacaagc
aaaccagctgcagaaatcttgataaagcctcaggaagagaaaggagtctc
tggagagtctgatgttaggtgtttgaggtccagaaaactagagtcgcttt
ggacagtgaacctaagccaagggtaactcgtggaaccaagaagatgcaaa
actctgaaggaggtaaggacccttgctgtcttatattgtgtgagacccag
acattctaatctttatgcccaggtacaaaggcaataggacatgccagcag
tcctgctatgctagtgggaagcatcattcgggccactactttcttgggtc
tgttgtaatccactttgaaatggattacctatgagg
gtcttgagtctttgatgagttgggggtgacttgggggtggcacttgtttg
ttttctttgggggtgccactggtagatggcttcttaaggatgtggtggca
tttgaccacagagcattgtggggagggaagtgacacggccagagcccttc
ctctgactgctgggtactgaccacttcccctggctcttcctggaaaggag
ttctcccaacacagtctgtctctcaggaagtggttcctggccagccccag
aggtctggtagggtctttctaaggtgggggtattttgcagagcagtagca
tcacacccctttagtcccagtacttgggaagcagaggcaggctagtctct
gagttcgaatccagcctggtctacagaatgagttccaggacagccaaggc
taagcagagaaaccctgtctcaaacaaataaaacaaaacaacaaagaaga
ttggggacttggcatgtatcctgggctgggtgtggattctggctagttct
cttatcccagcaagtcacctcagacttgtccagaggatcaggtagaatac
tggataaaagtggtacgcccagcgttttgacatctgtgcagggcatttcg
ggagaactgcacagacgagctcctcaaatacactgcatgcgttcacagtt
ctccctggcagcatgaaggccccaagctactgggacacacccgatagaat
tctagatcgttctagtaaatgtgctttggtttggtatctggccttgccca
tgccactttgtgggcataagcactctgtttcccatctctggggcttcacc
cccctcagatcctgaattcacccccacaatcctgtcttgttgggttgtca
aggtaaagctgcctcgtgacctcaggtacagagactgtggagcagtaagg
ctctgctctggggccccagccttccctgtgtctgtgggcaagacaggttc
ttgaagctccaatccttatgccctcgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_142884573_142885677
seq2: B6Ng01-124M20.b_50_1135 (reverse)

seq1  CCTCAATAGGTAAATTCACTATTCAAAGTGGAATTACCAAAACAGACACA  50
      |||| ||||||||  || |  |||||||||| |||||   ||||||| ||
seq2  CCTC-ATAGGTAA--TC-CATTTCAAAGTGG-ATTAC---AACAGACCCA  42

seq1  AGAAAGTAAGTGGCCCGAATGATGGCTTTCCCACTAGCATAGCAGGAGCT  100
      ||||||| ||||||||||||||||   |||||||||||||||||||| ||
seq2  AGAAAGT-AGTGGCCCGAATGATG--CTTCCCACTAGCATAGCAGGA-CT  88

seq1  GCTGGCATGTCCTTATTTGCCTTTGTAACCTGGGCATAAAGATTAGAATG  150
      |||||||||||||   |||||||||| |||||||||||||||||||||||
seq2  GCTGGCATGTCCT--ATTGCCTTTGT-ACCTGGGCATAAAGATTAGAATG  135

seq1  TTCTGGGTCTCACACAATATAAGACAGCAAGGGTCCTTACCTCCTTCAGA  200
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TCTGGGTCTCACACAATATAAGACAGCAAGGGTCCTTACCTCCTTCAGA  184

seq1  GTTTTTGCATCTTTCTTGGTTCCACGAGTTACCCTTGGCTTAGGTTCACT  250
      | ||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  G-TTTTGCATC-TTCTTGGTTCCACGAGTTACCCTTGGCTTAGGTTCACT  232

seq1  GTCCAAAGCGACTCTAGTTTTTCTGGACCTCAAACACCTAACATCAGACT  300
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GTCCAAAGCGACTCTAG-TTTTCTGGACCTCAAACACCTAACATCAGACT  281

seq1  CTCCAGAGACTCCTTTCTCTTCCTGAGGCTTTATCAAGATTTCTGCAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGAGACTCCTTTCTCTTCCTGAGGCTTTATCAAGATTTCTGCAGCT  331

seq1  GGTTTGCTTGTTTTCTCTTCTGCTTCACAAGGCTGGGGCATCTCAGTCGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGCTTGTTTTCTCTTCTGCTTCACAAGGCTGGGGCATCTCAGTCGT  381

seq1  TCCTCTAGACCTCAAGCATGTTCTTTTCCCACTGACTTGGCCCCGAGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTAGACCTCAAGCATGTTCTTTTCCCACTGACTTGGCCCCGAGATG  431

seq1  TAGATTTCTTGGCTCCATCATCTGGATTCTGCAGCTCTGTCTCCTGGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTCTTGGCTCCATCATCTGGATTCTGCAGCTCTGTCTCCTGGGAG  481

seq1  GCAGTCTTCATAGTCTTCTCGTTTTTCTTTATCCCGACATTCTCTGCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCTTCATAGTCTTCTCGTTTTTCTTTATCCCGACATTCTCTGCAGA  531

seq1  TGCATCAAACTTGGGCCTTGGCTGTTTTACATTGGTTTTCTTTCGGTACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCAAACTTGGGCCTTGGCTGTTTTACATTGGTTTTCTTTCGGTACC  581

seq1  TAGAGTTCTGGGGTGTTTTGTAAGGGAATGAGAAGACAACCACAAAATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTTCTGGGGTGTTTTGTAAGGGAATGAGAAGACAACCACAAAATTA  631

seq1  GTGAAATCTAAAAGATCCATCAGGAAAAAAAAAAAAGAAGCAAAAATATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAATCTAAAAGATCCATCAGGAAAAAAAAAAAAGAAGCAAAAATATA  681

seq1  AAAAGAGAAAATAACAAATTTTATATTGATTAATTTGCTAAGAGTTATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGAAAATAACAAATTTTATATTGATTAATTTGCTAAGAGTTATCT  731

seq1  ATGATATTCAAGGCAATGCCTTGGCTACTTTGTTCCTATGGAAAAAGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATTCAAGGCAATGCCTTGGCTACTTTGTTCCTATGGAAAAAGAAT  781

seq1  ACATACTAACAAATTATAATTCCAGGATGTCAATCATAATGCATATCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACTAACAAATTATAATTCCAGGATGTCAATCATAATGCATATCAAA  831

seq1  AACATTCCAGTTCATACTACTGAAGAATGCCCATCACAAAGGCAGTAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTCCAGTTCATACTACTGAAGAATGCCCATCACAAAGGCAGTAAAT  881

seq1  GAACTGCTGATCCTTTAAAGATCATTAAGGTACAAGGCCCGGCAATCTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGCTGATCCTTTAAAGATCATTAAGGTACAAGGCCCGGCAATCTTT  931

seq1  GAAGGGTGCCATGGTGACCTCCCTGTTTCATTCCATCTCAAGGATAGATA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGTGCCATGGTGACCTCCCTGTTTCATTCCATCTCAAGGATAGATA  981

seq1  AACCTTAGCAGCACCTGCATCCTTAATAGACACTGTCACATACACAGAAC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTAGCAGCACCTGCATCCTTAATAGACACTGTCACATACACAGAAC  1031

seq1  AACACTGGCCACCTGTTCCCTGATTAACTCTTCAAATTAGTTATACATGG  1100
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AACACTGGCCACCTGTTCCCTGTTTAACTCTTCAAATTAGTTATACATGG  1081

seq1  AATTC  1105
      |||||
seq2  AATTC  1086

seq1: chr7_142783214_142784189
seq2: B6Ng01-124M20.g_78_1055

seq1  GTCTTGAGTCTTTGATGAGTTGGGGGTGACTTGGGGGTGGCACTTGTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGAGTCTTTGATGAGTTGGGGGTGACTTGGGGGTGGCACTTGTTTG  50

seq1  TTTTCTTTGGGGGTGCCACTGGTAGATGGCTTCTTAAGGATGTGGTGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTGGGGGTGCCACTGGTAGATGGCTTCTTAAGGATGTGGTGGCA  100

seq1  TTTGACCACAGAGCATTGTGGGGAGGGAAGTGACACGGCCAGAGCCCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACCACAGAGCATTGTGGGGAGGGAAGTGACACGGCCAGAGCCCTTC  150

seq1  CTCTGACTGCTGGGTACTGACCACTTCCCCTGGCTCTTCCTGGAAAGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGACTGCTGGGTACTGACCACTTCCCCTGGCTCTTCCTGGAAAGGAG  200

seq1  TTCTCCCAACACAGTCTGTCTCTCAGGAAGTGGTTCCTGGCCAGCCCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCCAACACAGTCTGTCTCTCAGGAAGTGGTTCCTGGCCAGCCCCAG  250

seq1  AGGTCTGGTAGGGTCTTTCTAAGGTGGGGGTATTTTGCAGAGCAGTAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTGGTAGGGTCTTTCTAAGGTGGGGGTATTTTGCAGAGCAGTAGCA  300

seq1  TCACACCCCTTTAGTCCCAGTACTTGGGAAGCAGAGGCAGGCTAGTCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACCCCTTTAGTCCCAGTACTTGGGAAGCAGAGGCAGGCTAGTCTCT  350

seq1  GAGTTCGAATCCAGCCTGGTCTACAGAATGAGTTCCAGGACAGCCAAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCGAATCCAGCCTGGTCTACAGAATGAGTTCCAGGACAGCCAAGGC  400

seq1  TAAGCAGAGAAACCCTGTCTCAAACAAATAAAACAAAACAACAAAGAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAGAGAAACCCTGTCTCAAACAAATAAAACAAAACAACAAAGAAGA  450

seq1  TTGGGGACTTGGCATGTATCCTGGGCTGGGTGTGGATTCTGGCTAGTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGACTTGGCATGTATCCTGGGCTGGGTGTGGATTCTGGCTAGTTCT  500

seq1  CTTATCCCAGCAAGTCACCTCAGACTTGTCCAGAGGATCAGGTAGAATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCCCAGCAAGTCACCTCAGACTTGTCCAGAGGATCAGGTAGAATAC  550

seq1  TGGATAAAAGTGGTACGCCCAGCGTTTTGACATCTGTGCAGGGCATTTCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAAAAGTGGTACGCCCAGCGTTTTGACATCTGTGCAGGGCATTTCG  600

seq1  GGAGAACTGCACAGACGAGCTCCTCAAATACACTGCATGCGTTCACAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAACTGCACAGACGAGCTCCTCAAATACACTGCATGCGTTCACAGTT  650

seq1  CTCCCTGGCAGCATGAAGGCCCCAAGCTACTGGGACACACCCGATAGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGGCAGCATGAAGGCCCCAAGCTACTGGGACACACCCGATAGAAT  700

seq1  TCTAGATCGTTCTAGTAAATGTGCTTTGGTTTGGTATCTGGCCTTGCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGATCGTTCTAGTAAATGTGCTTTGGTTTGGTATCTGGCCTTGCCCA  750

seq1  TGCCAC-TTGTGGGCATAAGCACTCTGTTTCCCATCTCT-GGGCCTCACC  798
      |||||| |||||||||||||||||||||||||||||||| |||| |||||
seq2  TGCCACTTTGTGGGCATAAGCACTCTGTTTCCCATCTCTGGGGCTTCACC  800

seq1  CCCCTCAGATCCTGAATTCACCCCCACAATCCTGTCTTGTTGGGTTGTCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCAGATCCTGAATTCACCCCCACAATCCTGTCTTGTTGGGTTGTCA  850

seq1  GGGTAAAGCTGCCTCCGTGACCTCAGGTACAGAGACTGTGGAGCAGTCAG  898
       ||||||||||||| |||||||||||||||||||||||||||||||| ||
seq2  AGGTAAAGCTGCCT-CGTGACCTCAGGTACAGAGACTGTGGAGCAGTAAG  899

seq1  GCCTCTGCTCT-GGGCCCCAGCCTTCCCTGTGTCTGTGGGCAAGACAGGT  947
      | ||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  G-CTCTGCTCTGGGGCCCCAGCCTTCCCTGTGTCTGTGGGCAAGACAGGT  948

seq1  TCTTGATGCTCC-ATCCTTGTTCCCTCGGA  976
      |||||| ||||| |||||| | ||||||||
seq2  TCTTGAAGCTCCAATCCTTATGCCCTCGGA  978