BAC Information

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BAC

Clone NameB6Ng01-125E06
Chromosome7 (Build37)
Map Location 120,759,212 - 120,885,100
singlet/doubletdoublet
Overlap geneEG434228
Upstream geneLOC627808, Tead1, 4632411J06Rik, LOC434227, Arntl, A630005I04Rik, Btbd10, Pth, LOC100042736, Mlstd2
Downstream geneSpon1, Rras2, LOC668451, Copb1, Psma1, 4933406I18Rik, Pde3b, Cyp2r1, Calca, LOC100043295, Calcb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125E06.bB6Ng01-125E06.g
ACCDH927949DH927950
length1,163178
definitionDH927949|Mus musculus domesticus DNA, BAC clone: B6Ng01-125E06, 5' end.DH927950|Mus musculus domesticus DNA, BAC clone: B6Ng01-125E06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,883,931 - 120,885,100)(120,759,212 - 120,759,389)
sequence
gaattcccacctgctctgtgcttcctctgagcctctagcacttctggagc
tgaggggaagatgtggtcctaatggtcttcctccgcctctctcttaggaa
cacatgacacagcctggaccacctgcccagtgtctgtggccagagctgca
aagctgaccctgaggatagtcaagctaagaaacctctcccaaggctctca
cttctatctcaatgataccctacacccaaagaccacattcattcggaccc
tatttctatggattgttgttgtgttcagacacagcgattacataaccctc
ccaccctaaggtggactctatctcaacagctattactgggcaccagcttt
gtgcatagccttggaacagtagtgattcaagcaccccagtctttgatccc
agagcaccatcatccatctggtccatatttaaatcaactcaagttcactg
tggtgataatcttcctcttatacataattatactttacacacagcttttt
atttttaaaaactccaccagagagccctaccatctgtgtggactacctct
ttcagtactgagcacggtactgtgggcccgaaggcaattaatgtaagctc
tctgatgctactgacattcccaggcatttccttccagtcattctagttag
cgtcttaatgtgataataggttgattgatttttatgtgagtcttaatcac
ccattagatgtttaacctgtaattcaattttggcttcctcagccaaatga
ccttggccaggttgcacttcctctctgaaccccggtctcctcacctgttt
aagcaggttcataaaaggcttaatgtgataattaaattaagcagaaagcc
caggttaaaaggttgtgtatactcataaaaattctacttagtcatttttc
tttttctttcagcgtgtactgtagtctgggattctgtgccagactttgga
aatatcaggagactgacatgtggtctctgtcctccttaaatctgcatcag
tgggtagaaagcatgcagcatgtgcttgcacgccatttggaatctctagg
aattctttggggagcaagataatatttatttaaattcaacattgaagttg
gagaaattttagggaaaccactgtgggtgttcgtatgccatctgcatctt
tggcacttggcct
attcccagaacattcttgggctcctcactctaatagcctgtcaacagact
caaaactgagaattggcctcagtctaagtcatcagattcctgtggtaccc
acactgacttcaagctttttaacattaaaaaaattaaaattgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_120883931_120885100
seq2: B6Ng01-125E06.b_47_1209 (reverse)

seq1  AGGCCAAGTGCAAAGGATGCAGATGCGCATACAGACACACCACAGTGGCT  50
      ||||||||||| || |||||||||| ||||||  |||| ||||||||| |
seq2  AGGCCAAGTGCCAAAGATGCAGATG-GCATACGAACAC-CCACAGTGGTT  48

seq1  CCCCATAAAGATTTCTCCAACTTCAATTGTTGAATTT-AATAAATATTTA  99
       ||| |||| |||||||||||||||| |||||||||| |||||||| |||
seq2  TCCC-TAAA-ATTTCTCCAACTTCAA-TGTTGAATTTAAATAAATA-TTA  94

seq1  TTCCTTTGCTCCCCAAAGAATTCCTAGAGA-TCCAAATGCGTTGCAAGCA  148
      |    ||||||||||||||||||||||||| ||||||||   ||||||||
seq2  T---CTTGCTCCCCAAAGAATTCCTAGAGATTCCAAATGGCGTGCAAGCA  141

seq1  CATGCTTGCATGCCTTTCTACCCACCTGATTGCAGATTTAAGGGGGACAG  198
      ||||| |||||| ||||||||||| |||| ||||||||||||| ||||||
seq2  CATGC-TGCATG-CTTTCTACCCA-CTGA-TGCAGATTTAAGGAGGACAG  187

seq1  AGACCACATGTCAGTCTCCTGATATTTCCAAAGTCTGGCACAGAAT-CCA  247
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGACCACATGTCAGTCTCCTGATATTTCCAAAGTCTGGCACAGAATCCCA  237

seq1  GACTACAGTACACGCTGAAAG-AAAAGAAAAATGACTAAGTAGAA-TTTT  295
      ||||||||||||||||||||| ||||||||||||||||||||||| ||||
seq2  GACTACAGTACACGCTGAAAGAAAAAGAAAAATGACTAAGTAGAATTTTT  287

seq1  ATGAGTATACACAACCTTTTAACCTGGGC-TTCTGCTTAATTTAATTATC  344
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ATGAGTATACACAACCTTTTAACCTGGGCTTTCTGCTTAATTTAATTATC  337

seq1  ACATTAAGCCTTTTATGAACCTGCTTAAACAGGTGAGGAGACCGGGGTTC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAAGCCTTTTATGAACCTGCTTAAACAGGTGAGGAGACCGGGGTTC  387

seq1  AGAGAGGAAGTGCAACCTGGCCAAGGTCATTTGGCTGAGGAAGCCAAAAT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGAAGTGCAACCTGGCCAAGGTCATTTGGCTGAGGAAGCCAAAAT  437

seq1  TGAATTACAGGTTAAACATCTAATGGGTGATTAAGACTCACATAAAAATC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTACAGGTTAAACATCTAATGGGTGATTAAGACTCACATAAAAATC  487

seq1  AATCAACCTATTATCACATTAAGACGCTAACTAGAATGACTGGAAGGAAA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAACCTATTATCACATTAAGACGCTAACTAGAATGACTGGAAGGAAA  537

seq1  TGCCTGGGAATGTCAGTAGCATCAGAGAGCTTACATTAATTGCCTTCGGG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGGAATGTCAGTAGCATCAGAGAGCTTACATTAATTGCCTTCGGG  587

seq1  CCCACAGTACCGTGCTCAGTACTGAAAGAGGTAGTCCACACAGATGGTAG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAGTACCGTGCTCAGTACTGAAAGAGGTAGTCCACACAGATGGTAG  637

seq1  GGCTCTCTGGTGGAGTTTTTAAAAATAAAAAGCTGTGTGTAAAGTATAAT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTCTGGTGGAGTTTTTAAAAATAAAAAGCTGTGTGTAAAGTATAAT  687

seq1  TATGTATAAGAGGAAGATTATCACCACAGTGAACTTGAGTTGATTTAAAT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATAAGAGGAAGATTATCACCACAGTGAACTTGAGTTGATTTAAAT  737

seq1  ATGGACCAGATGGATGATGGTGCTCTGGGATCAAAGACTGGGGTGCTTGA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACCAGATGGATGATGGTGCTCTGGGATCAAAGACTGGGGTGCTTGA  787

seq1  ATCACTACTGTTCCAAGGCTATGCACAAAGCTGGTGCCCAGTAATAGCTG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTACTGTTCCAAGGCTATGCACAAAGCTGGTGCCCAGTAATAGCTG  837

seq1  TTGAGATAGAGTCCACCTTAGGGTGGGAGGGTTATGTAATCGCTGTGTCT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGATAGAGTCCACCTTAGGGTGGGAGGGTTATGTAATCGCTGTGTCT  887

seq1  GAACACAACAACAATCCATAGAAATAGGGTCCGAATGAATGTGGTCTTTG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACAACAACAATCCATAGAAATAGGGTCCGAATGAATGTGGTCTTTG  937

seq1  GGTGTAGGGTATCATTGAGATAGAAGTGAGAGCCTTGGGAGAGGTTTCTT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTAGGGTATCATTGAGATAGAAGTGAGAGCCTTGGGAGAGGTTTCTT  987

seq1  AGCTTGACTATCCTCAGGGTCAGCTTTGCAGCTCTGGCCACAGACACTGG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGACTATCCTCAGGGTCAGCTTTGCAGCTCTGGCCACAGACACTGG  1037

seq1  GCAGGTGGTCCAGGCTGTGTCATGTGTTCCTAAGAGAGAGGCGGAGGAAG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTGGTCCAGGCTGTGTCATGTGTTCCTAAGAGAGAGGCGGAGGAAG  1087

seq1  ACCATTAGGACCACATCTTCCCCTCAGCTCCAGAAGTGCTAGAGGCTCAG  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTAGGACCACATCTTCCCCTCAGCTCCAGAAGTGCTAGAGGCTCAG  1137

seq1  AGGAAGCACAGAGCAGGTGGGAATTC  1170
      ||||||||||||||||||||||||||
seq2  AGGAAGCACAGAGCAGGTGGGAATTC  1163

seq1: chr7_120759212_120759389
seq2: B6Ng01-125E06.g_72_249

seq1  ATTCCCAGAACATTCTTGGGCTCCTCACTCTAATAGCCTGTCAACAGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCAGAACATTCTTGGGCTCCTCACTCTAATAGCCTGTCAACAGACT  50

seq1  CAAAACTGAGAATTGGCCTCAGTCTAAGTCATCAGATTCCTGTGGTACCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTGAGAATTGGCCTCAGTCTAAGTCATCAGATTCCTGTGGTACCC  100

seq1  ACACTGACTTCAAGCTTTTTAACATTAAAAAAATTAAAATTGTGTGTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGACTTCAAGCTTTTTAACATTAAAAAAATTAAAATTGTGTGTGTG  150

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTG  178
      ||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTG  178