BAC Information

Click to search

BAC

Clone NameB6Ng01-125H18
Chromosome7 (Build37)
Map Location 76,173,315 - 76,330,849
singlet/doubletdoublet
Overlap genenone
Upstream geneIgf1r, C330024D12Rik, EG434197, LOC100041800, EG384639, Arrdc4
Downstream geneLOC384741, EG665410
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125H18.bB6Ng01-125H18.g
ACCDH928110DH928111
length1,145949
definitionDH928110|Mus musculus domesticus DNA, BAC clone: B6Ng01-125H18, 5' end.DH928111|Mus musculus domesticus DNA, BAC clone: B6Ng01-125H18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,173,315 - 76,174,468)(76,330,311 - 76,330,849)
sequence
gaattctgtatttttacattctttgtgaaatgaaaagctttgagcaaatg
gctattattttagttattatttagcctcctgcaataaaaacaaaatcaca
agagctttctcttttcatctgaaacaacatctaatacattattacacaac
ttcaactacattatttacaaaaatgcttttatgtttgagaatttaatttg
aatagcatagtaattcagggtataatccatagaacaatgtcagaaaacgt
tgtttcttttttttttcacagatacacatcagtgctcagtacaaagagaa
ctctgcattctaacacaatacccaacattagttaatattctaaagtaaga
aataagaatattagtacatttagtggtagtttctctctctatacacgttc
agagggactgtatgaatgtacaaagaaaaaagaaatccggtcagtcgatg
atattttatcataccttctatcatcgatggcaccagcaagatttcccatc
gtcatacaaggaatgacatccttcaaatcatcctctgaagtgagccaaca
ctgtggactcctcaacggtcactcaccactgttcctgatgacagatactg
gatttgttcatattccctctgacttgctttctccagttttggggtccata
ctgattataagtgaatcactgagaccaccatccttgtcagaatgatcatt
gctgggtggtgaggacagaaatcagttctttcttctggtttgcaggcata
gcattgtgtgattacccaatgtgttttactctagcatcaaaacagtggta
atggtagtcttctaccttgaattatacagacatgagattcttttgcatat
cacatagagttgtgaattttacttatcttcaactttttcttcaaataaac
aactttggcttatccattctacctgctacatatttttttaactctttatt
atttttttgagttacattttattaaccaatgcattgagaggccatccagc
cagtaagaattataaaacaggagtaaatttgaaagatcattatgtcttca
tctcattgacactttaattttttacttcatttacactaataaagcttgga
ttttcttgggttaatccacttgtaataaactttttaaattaagaa
gaattcaagaaacttgtcactctcccatttttaaatggagaattttgagt
taatattgtttctatgcttggcaccactctcggaagctagttccatacaa
ctcaataaggtgtacatgaagagcaatcaaatgaagcaagcacagttaat
ccttactgtgcaaaactttgtctttttctttgaatctaatttattgaacg
tgttgcaagaagagtcgagagaatgtgtttcagtgtgccattgctaggtg
tctgagaagagtacaaaccaaagtactgatgcagtttcctgtctggattc
caggtgtcatgtgaaggcagcattttgtgtgtggcctggtgggtgactac
ctccagatgacttcacatgaagttcttaataatagtgatatttgtatgca
tgtgtatgtgtgtatatgtgtgttcatgcatacatgtggatgcatgtaca
tgcacacatgtatcattatgtaaggtttgaggtcagagacctgatttagg
gaattccttatcatctccttctaccatgagttctttgcatcgaatgcatg
ttattaggtttgtagagcaagtacttttacaccatgagccatttcccagg
ctcatgattttttagtttttggaaatatcttaaaactataaatgagatgt
tatctggaaattaaaatgctgggtaaaaggagaaaaggcagattgtttga
ttttaccttatttttttcaagtatttattcacttagcctcctgatctcag
cctcctttgcctctgcctcctctcctcacaaccccacccatataaattct
tccctcctttgctccctcctcttcttctaagagaacaaggagccctccaa
ggtaccaactttgccttggacaacaagactgggcaggactaagccttatc
ccagttgaagacccaactgggcagtccagctagggaaagggatcccatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_76173315_76174468
seq2: B6Ng01-125H18.b_47_1191

seq1  GAATTCTGTATTTTTACATTCTTTGTGAAATGAAAAGCTTTGAGCAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTATTTTTACATTCTTTGTGAAATGAAAAGCTTTGAGCAAATG  50

seq1  GCTATTATTTTAGTTATTATTTAGCCTCCTGCAATAAAAACAAAATCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTATTTTAGTTATTATTTAGCCTCCTGCAATAAAAACAAAATCACA  100

seq1  AGAGCTTTCTCTTTTCATCTGAAACAACATCTAATACATTATTACACAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTTTCTCTTTTCATCTGAAACAACATCTAATACATTATTACACAAC  150

seq1  TTCAACTACATTATTTACAAAAATGCTTTTATGTTTGAGAATTTAATTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTACATTATTTACAAAAATGCTTTTATGTTTGAGAATTTAATTTG  200

seq1  AATAGCATAGTAATTCAGGGTATAATCCATAGAACAATGTCAGAAAACGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCATAGTAATTCAGGGTATAATCCATAGAACAATGTCAGAAAACGT  250

seq1  TGTTTCTTTTTTTTTTCACAGATACACATCAGTGCTCAGTACAAAGAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTTTTTTTTTTCACAGATACACATCAGTGCTCAGTACAAAGAGAA  300

seq1  CTCTGCATTCTAACACAATACCCAACATTAGTTAATATTCTAAAGTAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCATTCTAACACAATACCCAACATTAGTTAATATTCTAAAGTAAGA  350

seq1  AATAAGAATATTAGTACATTTAGTGGTAGTTTCTCTCTCTATACACGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGAATATTAGTACATTTAGTGGTAGTTTCTCTCTCTATACACGTTC  400

seq1  AGAGGGACTGTATGAATGTACAAAGAAAAAAGAAATCCGGTCAGTCGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGACTGTATGAATGTACAAAGAAAAAAGAAATCCGGTCAGTCGATG  450

seq1  ATATTTTATCATACCTTCTATCATCGATGGCACCAGCAAGATTTCCCATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTATCATACCTTCTATCATCGATGGCACCAGCAAGATTTCCCATC  500

seq1  GTCATACAAGGAATGACATCCTTCAAATCATCCTCTGAAGTGAGCCAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATACAAGGAATGACATCCTTCAAATCATCCTCTGAAGTGAGCCAACA  550

seq1  CTGTGGACTCCTCAACGGTCACTCACCACTGTTCCTGATGACAGATACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGACTCCTCAACGGTCACTCACCACTGTTCCTGATGACAGATACTG  600

seq1  GATTTGTTCATATTCCCTCTGACTTGCTTTCTCCAGTTTTGGGGTCCATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTTCATATTCCCTCTGACTTGCTTTCTCCAGTTTTGGGGTCCATA  650

seq1  CTGATTATAAGTGAATCACTGAGACCACCATCCTTGTCAGAATGATCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTATAAGTGAATCACTGAGACCACCATCCTTGTCAGAATGATCATT  700

seq1  GCTGGGTGGTGAGGACAGAAATCAGTTCTTTCTTCTGGTTTGCAGGCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGTGGTGAGGACAGAAATCAGTTCTTTCTTCTGGTTTGCAGGCATA  750

seq1  GCATTGTGTGATTACCCAATGTGTTTTACTCTAGCATCAAAACAGTGGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGTGTGATTACCCAATGTGTTTTACTCTAGCATCAAAACAGTGGTA  800

seq1  ATGGTAGTCTTCTACCTTGAATTATACAGACATGAGATTCTTTTGCATAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAGTCTTCTACCTTGAATTATACAGACATGAGATTCTTTTGCATAT  850

seq1  CACATAGAGTTGTGAATTTTACTTATCTTCAACTTTTTCTTCAAATAAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAGAGTTGTGAATTTTACTTATCTTCAACTTTTTCTTCAAATAAAC  900

seq1  AACTTTGGCTTATCCATTCTACCTGCTACATATTTTTTTAACTCTTTATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTGGCTTATCCATTCTACCTGCTACATATTTTTTTAACTCTTTATT  950

seq1  ATTTTTTTTGAGTTACATTTTATTAACCAATGCATTGAGAGGCCATCCAG  1000
      | ||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  A-TTTTTTTGAGTTACATTTTATTAACCAATGCATTGAGAGGCCATCCA-  998

seq1  GCCAGTAAGAATATAAAAACAGGAGTAAAATTTGAAAGATCATTATTGTC  1050
      ||||||||||||   ||||||||||| |||||||||||||||||| ||||
seq2  GCCAGTAAGAATTATAAAACAGGAGT-AAATTTGAAAGATCATTA-TGTC  1046

seq1  CTCATCTCATTGACCACTTTAATTTTATACTTCATTTTACAACTTATAAA  1100
       |||||||||||| |||||||||||| ||||||| ||||| ||| |||||
seq2  TTCATCTCATTGA-CACTTTAATTTTTTACTTCA-TTTAC-ACTAATAAA  1093

seq1  GCTTTGATATTTCTTGTGTTTTAATCACTTTGTAAATAACTTTTT-TATT  1149
      |||| ||| ||||||| |  ||||||   ||||||  ||||||||  |||
seq2  GCTTGGAT-TTTCTTGGG--TTAATCCACTTGTAATAAACTTTTTAAATT  1140

seq1  AAGAA  1154
      |||||
seq2  AAGAA  1145

seq1: chr7_76330311_76330849
seq2: B6Ng01-125H18.g_69_607 (reverse)

seq1  TGCAAAGAACTCATGGTAGAAGGAGATGATAAGGAATTCCCTAAATCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAGAACTCATGGTAGAAGGAGATGATAAGGAATTCCCTAAATCAGG  50

seq1  TCTCTGACCTCAAACCTTACATAATGATACATGTGTGCATGTACATGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGACCTCAAACCTTACATAATGATACATGTGTGCATGTACATGCAT  100

seq1  CCACATGTATGCATGAACACACATATACACACATACACATGCATACAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGTATGCATGAACACACATATACACACATACACATGCATACAAAT  150

seq1  ATCACTATTATTAAGAACTTCATGTGAAGTCATCTGGAGGTAGTCACCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTATTATTAAGAACTTCATGTGAAGTCATCTGGAGGTAGTCACCCA  200

seq1  CCAGGCCACACACAAAATGCTGCCTTCACATGACACCTGGAATCCAGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCACACACAAAATGCTGCCTTCACATGACACCTGGAATCCAGACA  250

seq1  GGAAACTGCATCAGTACTTTGGTTTGTACTCTTCTCAGACACCTAGCAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACTGCATCAGTACTTTGGTTTGTACTCTTCTCAGACACCTAGCAAT  300

seq1  GGCACACTGAAACACATTCTCTCGACTCTTCTTGCAACACGTTCAATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACACTGAAACACATTCTCTCGACTCTTCTTGCAACACGTTCAATAAA  350

seq1  TTAGATTCAAAGAAAAAGACAAAGTTTTGCACAGTAAGGATTAACTGTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATTCAAAGAAAAAGACAAAGTTTTGCACAGTAAGGATTAACTGTGC  400

seq1  TTGCTTCATTTGATTGCTCTTCATGTACACCTTATTGAGTTGTATGGAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTCATTTGATTGCTCTTCATGTACACCTTATTGAGTTGTATGGAAC  450

seq1  TAGCTTCCGAGAGTGGTGCCAAGCATAGAAACAATATTAACTCAAAATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTCCGAGAGTGGTGCCAAGCATAGAAACAATATTAACTCAAAATTC  500

seq1  TCCATTTAAAAATGGGAGAGTGACAAGTTTCTTGAATTC  539
      |||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTAAAAATGGGAGAGTGACAAGTTTCTTGAATTC  539