BAC Information

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BAC

Clone NameB6Ng01-125J09
Chromosome7 (Build37)
Map Location 72,517,053 - 72,518,047
singlet/doubletsinglet
Overlap genenone
Upstream geneMtmr15, LOC100041582, Mphosph10, Mcee, Apba2, 5730507A09Rik, Ndnl2, Tjp1
Downstream geneGm1693, EG665234, Tarsl2, Tm2d3, LOC665241, Pcsk6, Snrpa1, H47, Chsy1, Lrrk1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125J09.bB6Ng01-125J09.g
ACCDH928180DH928181
length987154
definitionDH928180|Mus musculus domesticus DNA, BAC clone: B6Ng01-125J09, 5' end.DH928181|Mus musculus domesticus DNA, BAC clone: B6Ng01-125J09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaactatatgaccaatttaaacctaattctaacttggaaatatcc
atacatgaaatgtaaacatcaattaaggtttcaaagtcaagtattttgta
actctaagccagctgaaccagaaaagagcatcgtgcaaaccaaaccctgt
ttctcggcatgtaggaaaacagttaaagtcagttttgttttttgttttgt
tttgttttagttgtggtgtgtgtagttatttcacaggcaaagtgtcctgt
gttctctcaaagggggtgattaaatttatcctatgagaaaacagcattat
aaaagacttgggtgtgctgtggctgagaaagcggttcctgaaggactttc
ataccagggagggcattaccatttaataagagatgcactctgcaaacctg
cctagcagtttgatgcgcctactccttcccttttctctttggtcaatcag
tttatcaagtctattatgtaagctaaatattagatcactacatcgtgtct
acatctaatttacctgattggtcttatcttgccatggctttaaaaaaaaa
atgaaatcaaggaaaaccatttcactttcagaacactttgctttaaaaag
tgtgtcaattaaaaatttccaaataatgtaaccattcttaaaatttttcc
agtggtattttgagtaaccaaattaaattatctaacatgaactataagct
gcactaggtaagttgaatagattttttttttttctgaaacagggtttctc
tgtgtagccctggctgtcctgcaactcactctgtagaccaggctggcctt
gaactcagaaatccgcctgcctctgcctcctgagtgctggggattaaagg
cgtgcaccaccacgcccggattcttcttttttattttttttttgtggaat
agaattcttaatatctaaaccaactaattgtatatccttttccataagca
agggaaggtcctatcatttacagaaaggaaggtgcgg
aagaaaatggccctaggggccactcccccattgggtctggggtagtagag
atgaaatgttgatttagcaagttgactcaggaaagttggaggggagaatg
tatgctagcccagctttgagctaatcaaagcatatcaaaattagctggtg
tgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_72517053_72518047
seq2: B6Ng01-125J09.b_49_1035

seq1  GAATTCAACTATATGACCAATTTAAACCTAATTCTAACTTGGAAATATCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTATATGACCAATTTAAACCTAATTCTAACTTGGAAATATCC  50

seq1  ATACATGAAATGTAAACATCAATTAAGGTTTCAAAGTCAAGTATTTTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATGAAATGTAAACATCAATTAAGGTTTCAAAGTCAAGTATTTTGTA  100

seq1  ACTCTAAGCCAGCTGAACCAGAAAAGAGCATCGTGCAAACCAAACCCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAAGCCAGCTGAACCAGAAAAGAGCATCGTGCAAACCAAACCCTGT  150

seq1  TTCTCGGCATGTAGGAAAACAGTTAAAGTCAGTTTTGTTTTTTGTTTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCGGCATGTAGGAAAACAGTTAAAGTCAGTTTTGTTTTTTGTTTTGT  200

seq1  TTTGTTTTAGTTGTGGTGTGTGTAGTTATTTCACAGGCAAAGTGTCCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTAGTTGTGGTGTGTGTAGTTATTTCACAGGCAAAGTGTCCTGT  250

seq1  GTTCTCTCAAAGGGGGTGATTAAATTTATCCTATGAGAAAACAGCATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCTCAAAGGGGGTGATTAAATTTATCCTATGAGAAAACAGCATTAT  300

seq1  AAAAGACTTGGGTGTGCTGTGGCTGAGAAAGCGGTTCCTGAAGGACTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGACTTGGGTGTGCTGTGGCTGAGAAAGCGGTTCCTGAAGGACTTTC  350

seq1  ATACCAGGGAGGGCATTACCATTTAATAAGAGATGCACTCTGCAAACCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAGGGAGGGCATTACCATTTAATAAGAGATGCACTCTGCAAACCTG  400

seq1  CCTAGCAGTTTGATGCGCCTACTCCTTCCCTTTTCTCTTTGGTCAATCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCAGTTTGATGCGCCTACTCCTTCCCTTTTCTCTTTGGTCAATCAG  450

seq1  TTTATCAAGTCTATTATGTAAGCTAAATATTAGATCACTACATCGTGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCAAGTCTATTATGTAAGCTAAATATTAGATCACTACATCGTGTCT  500

seq1  ACATCTAATTTACCTGATTGGTCTTATCTTGCCATGGCTTTAAAAAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTAATTTACCTGATTGGTCTTATCTTGCCATGGCTTTAAAAAAAAA  550

seq1  ATGAAATCAAGGAAAACCATTTCACTTTCAGAACACTTTGCTTTAAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATCAAGGAAAACCATTTCACTTTCAGAACACTTTGCTTTAAAAAG  600

seq1  TGTGTCAATTAAAAATTTCCAAATAATGTAACCATTCTTAAAATTTTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCAATTAAAAATTTCCAAATAATGTAACCATTCTTAAAATTTTTCC  650

seq1  AGTGGTATTTTGAGTAACCAAATTAAATTATCTAACATGAACTATAAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTATTTTGAGTAACCAAATTAAATTATCTAACATGAACTATAAGCT  700

seq1  GCACTAGGTAAGTTGAATAGATTTTTTTTTTTTCTGAAACAGGGTTTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTAGGTAAGTTGAATAGATTTTTTTTTTTTCTGAAACAGGGTTTCTC  750

seq1  TGTGTAGCCCTGGCTGTCCTGCAACTCACTCTGTAGACCAGGCTGGCCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGTGTAGCCCTGGCTGTCCTGCAACTCACTCTGTAGACCAGGCTGGCCTT  800

seq1  GAACTCAGAAATCCGCCTGCCTCTGCCTCCTGAGTGCT-GGGATTAAAGG  849
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GAACTCAGAAATCCGCCTGCCTCTGCCTCCTGAGTGCTGGGGATTAAAGG  850

seq1  CGTGCACCACCACGCCCGGATTCTTTTTTTTTTTTTTTTTTTTTTTTTGT  899
      ||||||||||||||||||||||||| |||||| |||||||||| |     
seq2  CGTGCACCACCACGCCCGGATTCTTCTTTTTTATTTTTTTTTTGT----G  896

seq1  GAATAGATATTCTTAATATCTAAACCAAACTATATTTGTATAT-CTTTTC  948
      ||||||| ||||||||||||||||||||    || |||||||| ||||||
seq2  GAATAGA-ATTCTTAATATCTAAACCAA---CTAATTGTATATCCTTTTC  942

seq1  CAAATAGCAAGGGAAGGGTCCCATCATTTACAGAAATGAAGGTGCGG  995
      || | |||||||||| ||||| |||||||||||||| ||||||||||
seq2  CATA-AGCAAGGGAA-GGTCCTATCATTTACAGAAAGGAAGGTGCGG  987