BAC Information

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BAC

Clone NameB6Ng01-125L17
Chromosome7 (Build37)
Map Location 66,576,732 - 66,695,741
singlet/doubletdoublet
Overlap genenone
Upstream geneAtp10a, LOC621446, LOC668811, LOC668813, LOC668815, EG668818, Ube3a
Downstream geneLOC100040985, LOC100041010, LOC100041029, LOC100041051, Pwcr1, LOC664788, Snrpn, Snurf, EG664849
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125L17.bB6Ng01-125L17.g
ACCDH928283DH928284
length1,0491,011
definitionDH928283|Mus musculus domesticus DNA, BAC clone: B6Ng01-125L17, 5' end.DH928284|Mus musculus domesticus DNA, BAC clone: B6Ng01-125L17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,694,682 - 66,695,741)(66,576,732 - 66,577,751)
sequence
gaattccagggatcctttgtgtgtccactgatgtttctatatggtagcca
ggaagacttgtgtgtgctgggctggtagtaatacaagaggtaaccccagg
acagtttctccacaatgaagttgtgccaatagagctccagaaatatgtct
ctctcctctgacctttatttaaaaaagggacaacaagcgccttgacttct
ttccctttcctccttagggaagacattcttccaagtatcaagagagggag
cccttgcttccctggaagacatttcgtcccagcaatcactctccagttcc
atgtgaccattcctactctgagccagttttggaaaggaaggtaagtggtt
ggatttgattaggtgatatccaagtagaggtagccgaattctgtctagga
ctgggtcaatgatgaaaacccaatgtcatgaagaaaagtgatgacataaa
attcatgctcaataggattacgctgaggcccaaccagggcgacagggtta
caagaggtccattgactccttggggggctcttgggtgacttccctgaagt
cctcagatgcccttgccctgtttcccatgagaggaaatgtggacatctag
ggtgcacattggttggcaaacactgcatgccaacaagcacctagtcccac
aatggaaccttgggcatttctgcaaggatcgcaccttgctcatgacaatg
tcttttctggtgttttgcagtcatctcacatgccaccttggaaggcagag
aaacacagataatcaggtaagtggtcagaacatggtaaagcctccacatc
caggtgacctcccccttcatgatttcgctttcaattctcagccagtcggt
ccttttggaatttggggataacaaaatggtatgcaaggtaccaaaggagc
tcgatttaaggcttatgttctcgatgtacatcccctggtttgtaacgttt
taaggaatgttgtcaactccctataatgttttttcatattgacctactct
catggaagaaggagatgacattttgatattgcatctcatacttgatgct
gaattccctagtgtttcaaaggctgtgttggtcatgggctcaaaggttgt
ggcactctgtccagggtctttgaacaggcattttccaaaggaagactgaa
aaaacttggaatgagtatctactttagtacacactaagtcattattacaa
gggtcaaaagagtgctcaaaatcattataatatagggggaaagaacaaat
agttaataaggaaaaactggaaatgtgtgaagtatctgagcaattaggcg
aatgtaataaaaatatgtatcagattaccaaactgcaaatttaactgata
ttcaaacataatgattgaggattcaaaacaaataacacatgactggaagg
ttaaaagattggaacaatagcaacaaatattagacctgaaaacatcaatt
aaataacacattggtcaaaaataaaaactcttacctagattattagttat
ctgaaaatatatagaaagaagagaaaaataaagaatgaatgaaggaagtt
tgtggcattggtggagcacgattaaaaaggaattttttttttaacttggt
gttggctcatttgctttgcttacccaattccctggcttgaatcaatagca
caaaatgttacaataggacaaaggttcaaatagtttgtgttcaagataaa
acaaagagaaaggtttaagaggctgaagaattaatggcattaaacatcct
atactaggtgaaagttacccaggtacaggtagttcacgggattccaggtt
tggtctatgtatttgccccagaacatagtcattgccttgtgccacacaca
taggtatacatgtgcgcctctgcgcatgcacgcgcacacacatacacaca
cacacacacacacacacacacacacacacaccagaaaaatgttgaaaaca
aaagaaatcatatatagagcctcctcgtatattgtagcatacactcatag
aaacatcatgctttgagtagagagttttaaagggctaagatgcatctgat
ttatgtatgcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_66694682_66695741
seq2: B6Ng01-125L17.b_47_1095 (reverse)

seq1  AGCATCAAAGTATGAGATGCCAATATTCAAAAAATGTCATCCTCCTCTCT  50
      |||||| |||||||||||| ||||||    |||||||||| |||||   |
seq2  AGCATC-AAGTATGAGATG-CAATAT---CAAAATGTCAT-CTCCTTCTT  44

seq1  CCATGAGAAGTAGGTCAAAATTATGAAAAAACAATTATAGGGAGTTGAAC  100
      ||||||| ||||||||||   ||||||||||| |||||||||||||||  
seq2  CCATGAG-AGTAGGTCAA---TATGAAAAAAC-ATTATAGGGAGTTGACA  89

seq1  ACATTCCTTAAAACGTTACAAACCAGGGGATGTACATCGGAGAACAT-AG  149
      |||||||||||||||||||||||||||||||||||||| |||||||| ||
seq2  ACATTCCTTAAAACGTTACAAACCAGGGGATGTACATC-GAGAACATAAG  138

seq1  CC-TAAATCGAGCTCCTTTGGTACCTTTGCATACCATTTTGTTATCCCCA  198
      || |||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CCTTAAATCGAGCTCCTTTGGTACC-TTGCATACCATTTTGTTATCCCCA  187

seq1  AATTCCAAAAGGACCGACTGGCCGAGAATTGAAAGCGAAATCATGAAGGG  248
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AATTCCAAAAGGACCGACTGGCTGAGAATTGAAAGCGAAATCATGAAGGG  237

seq1  GGAGGTCACCTGGATGTGGAGGCTTTACCATGTTCTGACCACTTACCTGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTCACCTGGATGTGGAGGCTTTACCATGTTCTGACCACTTACCTGA  287

seq1  TTATCTGTGTTTCTCTGCCTTCCAAGGTGGCATGTGAGATGACTGCAAAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGTGTTTCTCTGCCTTCCAAGGTGGCATGTGAGATGACTGCAAAA  337

seq1  CACCAGAAAAGACATTGTCATGAGCAAGGTGCGATCCTTGCAGAAATGCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGAAAAGACATTGTCATGAGCAAGGTGCGATCCTTGCAGAAATGCC  387

seq1  CAAGGTTCCATTGTGGGACTAGGTGCTTGTTGGCATGCAGTGTTTGCCAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTTCCATTGTGGGACTAGGTGCTTGTTGGCATGCAGTGTTTGCCAA  437

seq1  CCAATGTGCACCCTAGATGTCCACATTTCCTCTCATGGGAAACAGGGCAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGTGCACCCTAGATGTCCACATTTCCTCTCATGGGAAACAGGGCAA  487

seq1  GGGCATCTGAGGACTTCAGGGAAGTCACCCAAGAGCCCCCCAAGGAGTCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATCTGAGGACTTCAGGGAAGTCACCCAAGAGCCCCCCAAGGAGTCA  537

seq1  ATGGACCTCTTGTAACCCTGTCGCCCTGGTTGGGCCTCAGCGTAATCCTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACCTCTTGTAACCCTGTCGCCCTGGTTGGGCCTCAGCGTAATCCTA  587

seq1  TTGAGCATGAATTTTATGTCATCACTTTTCTTCATGACATTGGGTTTTCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCATGAATTTTATGTCATCACTTTTCTTCATGACATTGGGTTTTCA  637

seq1  TCATTGACCCAGTCCTAGACAGAATTCGGCTACCTCTACTTGGATATCAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGACCCAGTCCTAGACAGAATTCGGCTACCTCTACTTGGATATCAC  687

seq1  CTAATCAAATCCAACCACTTACCTTCCTTTCCAAAACTGGCTCAGAGTAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCAAATCCAACCACTTACCTTCCTTTCCAAAACTGGCTCAGAGTAG  737

seq1  GAATGGTCACATGGAACTGGAGAGTGATTGCTGGGACGAAATGTCTTCCA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGTCACATGGAACTGGAGAGTGATTGCTGGGACGAAATGTCTTCCA  787

seq1  GGGAAGCAAGGGCTCCCTCTCTTGATACTTGGAAGAATGTCTTCCCTAAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGCAAGGGCTCCCTCTCTTGATACTTGGAAGAATGTCTTCCCTAAG  837

seq1  GAGGAAAGGGAAAGAAGTCAAGGCGCTTGTTGTCCCTTTTTTAAATAAAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAGGGAAAGAAGTCAAGGCGCTTGTTGTCCCTTTTTTAAATAAAG  887

seq1  GTCAGAGGAGAGAGACATATTTCTGGAGCTCTATTGGCACAACTTCATTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAGGAGAGAGACATATTTCTGGAGCTCTATTGGCACAACTTCATTG  937

seq1  TGGAGAAACTGTCCTGGGGTTACCTCTTGTATTACTACCAGCCCAGCACA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAACTGTCCTGGGGTTACCTCTTGTATTACTACCAGCCCAGCACA  987

seq1  CACAAGTCTTCCTGGCTACCATATAGAAACATCAGTGGACACACAAAGGA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGTCTTCCTGGCTACCATATAGAAACATCAGTGGACACACAAAGGA  1037

seq1  TCCCTGGAATTC  1060
      ||||||||||||
seq2  TCCCTGGAATTC  1049

seq1: chr7_66576732_66577751
seq2: B6Ng01-125L17.g_69_1079

seq1  GAATTCCCTAGTGTTTCAAAGGCTGTGTTGGTCATGGGCTCAAAGGTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTAGTGTTTCAAAGGCTGTGTTGGTCATGGGCTCAAAGGTTGT  50

seq1  GGCACTCTGTCCAGGGTCTTTGAACAGGCATTTTCCAAAGGAAGACTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTCTGTCCAGGGTCTTTGAACAGGCATTTTCCAAAGGAAGACTGAA  100

seq1  AAAACTTGGAATGAGTATCTACTTTAGTACACACTAAGTCATTATTACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTGGAATGAGTATCTACTTTAGTACACACTAAGTCATTATTACAA  150

seq1  GGGTCAAAAGAGTGCTCAAAATCATTATAATATAGGGGGAAAGAACAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCAAAAGAGTGCTCAAAATCATTATAATATAGGGGGAAAGAACAAAT  200

seq1  AGTTAATAAGGAAAAACTGGAAATGTGTGAAGTATCTGAGCAATTAGGCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAATAAGGAAAAACTGGAAATGTGTGAAGTATCTGAGCAATTAGGCG  250

seq1  AATGTAATAAAAATATGTATCAGATTACCAAACTGCAAATTTAACTGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAATAAAAATATGTATCAGATTACCAAACTGCAAATTTAACTGATA  300

seq1  TTCAAACATAATGATTGAGGATTCAAAACAAATAACACATGACTGGAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACATAATGATTGAGGATTCAAAACAAATAACACATGACTGGAAGG  350

seq1  TTAAAAGATTGGAACAATAGCAACAAATATTAGACCTGAAAACATCAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGATTGGAACAATAGCAACAAATATTAGACCTGAAAACATCAATT  400

seq1  AAATAACACATTGGTCAAAAATAAAAACTCTTACCTAGATTATTAGTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACACATTGGTCAAAAATAAAAACTCTTACCTAGATTATTAGTTAT  450

seq1  CTGAAAATATATAGAAAGAAGAGAAAAATAAAGAATGAATGAAGGAAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAATATATAGAAAGAAGAGAAAAATAAAGAATGAATGAAGGAAGTT  500

seq1  TGTGGCATTGGTGGAGCACGATTAAAAAGGAATTTTTTTTTTAACTTGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCATTGGTGGAGCACGATTAAAAAGGAATTTTTTTTTTAACTTGGT  550

seq1  GTTGGCTCATTTGCTTTGCTTACCCAATTCCCTGGCTTGAATCAATAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCTCATTTGCTTTGCTTACCCAATTCCCTGGCTTGAATCAATAGCA  600

seq1  CAAAATGTTACAATAGGACAAAGGTTCAAATAGTTTGTGTTCAAGATAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGTTACAATAGGACAAAGGTTCAAATAGTTTGTGTTCAAGATAAA  650

seq1  ACAAAGAGAAAGGTTTAAGAGGCTGAAGAATTAATGGCATTAAACATCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGAGAAAGGTTTAAGAGGCTGAAGAATTAATGGCATTAAACATCCT  700

seq1  ATACTAGGTGAAAGTTACCCAGGTACAGGTAGTTCACGGGATTCCAGGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAGGTGAAAGTTACCCAGGTACAGGTAGTTCACGGGATTCCAGGTT  750

seq1  TGGTCTATGTATTTGCCCCAGAACATAGTCATTGCCTTGTGCCACACACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTATGTATTTGCCCCAGAACATAGTCATTGCCTTGTGCCACACACA  800

seq1  TAGGTATACATGTGCGCCTCTGCGCATGCACGCGCACACACATACACACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTATACATGTGCGCCTCTGCGCATGCACGCGCACACACATACACACA  850

seq1  CACACACACACACACACACACACACACACACCAGAAAAATGTTGAAAACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACCAGAAAAATGTTGAAAACA  900

seq1  AAAGAAACCATATATAAGAGCCCTCTCGTATA-TGTAGCATACACCTCAA  949
      ||||||| ||||||| ||||||  |||||||| ||||||||||| ||| |
seq2  AAAGAAATCATATAT-AGAGCCTCCTCGTATATTGTAGCATACA-CTC-A  947

seq1  TAGAAACATCATGCTTTGAAGTAGAGAAGTTTTTAAAGGGCTAAAGAATT  999
      |||||||||||||||||| ||||||||   |||||||||||| ||||  |
seq2  TAGAAACATCATGCTTTG-AGTAGAGA--GTTTTAAAGGGCT-AAGA--T  991

seq1  GCATCTGGATATATGTATGCC  1020
      |||||| ||| ||||||||||
seq2  GCATCT-GATTTATGTATGCC  1011