BAC Information

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BAC

Clone NameB6Ng01-125N15
Chromosome7 (Build37)
Map Location 81,369,804 - 81,370,950
singlet/doubletsinglet
Overlap genenone
Upstream gene4930429H19Rik, LOC665588, Rgma, Chd2, 1810026B05Rik, EG665610, LOC244061, A830073O21Rik, St8sia2, LOC100042127, LOC100042140
Downstream geneLOC546979, Slco3a1, EG665308, EG665641, 0610006L08Rik, Sv2b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125N15.bB6Ng01-125N15.g
ACCDH928373DH928374
length1,1621,116
definitionDH928373|Mus musculus domesticus DNA, BAC clone: B6Ng01-125N15, 5' end.DH928374|Mus musculus domesticus DNA, BAC clone: B6Ng01-125N15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccggcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaataaggacacatgctccactat
gttcatagcagccttgtttataatagccagaagctggaaagagcccagat
tcccctcaacagaggaatggatacagaaaatgtggtacattaacacaatg
gaatactactcagctattaaaaaaatgaatttatgaaattcctaggcaaa
tgaatggacctggagggtatcatcctgagggaggtaacccaatcacaaag
gaactcgcacaatatgtactcactgataagtggatattagcccagaaact
taggatacccaagatataagatacaacttgccaaatgcatgaaattcaag
aagaacgaagaccaaagtgtggacactttaccctttcttagaaacgggaa
caaaacacccatggaaggagttacagagatgaaatttggagctgtgatga
aaggatggaccatctagtgattgtcatatgcagggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttgctgaaa
ggacccagatatagctcgctcttgtgagactatgccggggcctagcaaac
acagaagtggatgatcacagtcagctattggatgggtcacacggccccaa
tggaggagctagagaaattacccaaggagctaaagggactgcaaccctat
aggtggaacacatatgactacagtacccgggagctctgtctttagctgct
atgtatcaaagatggcctatgtaagcatcactgcagagagtcattgactt
gcaactttatatgccagtacagggacgcctaggctaaaagggggagggtg
tgtggtagtgtt
gaattcttttcactctaaaagcaaagtgttctggacaccttttaagaatt
tatatttaaaatctatttatgtcttttaatagacatataaccttggaaaa
ggtgcttaactactttaagattcaaacttatgcaaaatatttaagatatt
aactgtttgaaagccaaggatctgagctaacacctaaatcaccaagagat
tagaagccttgggcaaggcagtagccattactgttttctcatagtccttt
accaaggtaggcttcgataaataagatagaactctatagacagtcaaact
tcctaacaatgtgtcaggttgtgtatcctttgtccaaaatgcttggagcc
aaaactgtttcagattcctcaatgttttctattatgttggcatagctttt
gttgcttttatgcccttaataggaaaatacagatctgaaactgtccaaac
atttttatgacattcatttattttgcgtatgcatctgtgtgtgtacatgt
gcaagcatgtgcatgcccatttgcctctgtgtgtgtgtgtgtatccacat
gtttgactagtggtcagagattagcacttaggggtcagtctcaaactctg
gtcttcaggctcaaaggcaaaaaagcccttacccactgagatagcttgcc
aaccagaaactgtttcgcattccaattaaaatttttattctttagttagt
gcagaagtaatggacttcactgtggcttttccatatgtgtgtattattgt
gccttcttcatattttactccctcattcctctccttagctttactccctc
tccttctaagatgcctccccctatcatctgcttttttatgtcaaatgtag
ataatgcagaagacacttaatatagagtagaaacctgtataaacaataaa
ttaaatactatgtgctgttagaagcagctagacgagctgagaaggagagt
tacactataggagacagcagtttcactaccctgactcccagatcgctcag
acctgagcactacagcagcttaaccagcgatattgaggccccggacattg
taagcaaaggctgctggactgattccgacgagaaatgcacttatctcgaa
aacttggagccaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_81369804_81370950
seq2: B6Ng01-125N15.g_69_1184 (reverse)

seq1  TCCCTGGGGCTCCAAGTTTCTCGAGGATTAGGTGCATCTTCTCTGTCTGA  50
      |||||  |||||||||||| |||||   || |||||| ||||| ||| ||
seq2  TCCCT--GGCTCCAAGTTT-TCGAG--ATAAGTGCAT-TTCTC-GTCGGA  43

seq1  ATCCAGATCCAGCAGGCCTCTGCTGTACATATGTCGGGGGCCTC-ATATC  99
      || ||| ||||||| |||| |||| |||| ||||| |||||||| |||||
seq2  AT-CAG-TCCAGCA-GCCTTTGCT-TACA-ATGTCCGGGGCCTCAATATC  88

seq1  TGCTGGTGTATGCTGCCTGGTTGGTGGCTCAGTGTCTGAGCGATCCTGGG  149
       |||||| || |||| |||  | || |||||| ||||||||||| |||||
seq2  -GCTGGT-TAAGCTG-CTG--TAGT-GCTCAG-GTCTGAGCGAT-CTGGG  130

seq1  AGTCCAGGGTAGTTGAAACTGCTGGTCTTCCTATAGTGTAACTCTCCTTC  199
      ||| |||||||| |||||||||| ||| ||||||||||||||||||||||
seq2  AGT-CAGGGTAG-TGAAACTGCT-GTC-TCCTATAGTGTAACTCTCCTTC  176

seq1  TCAGCTTCGTCTAGCTGCTTCCTAACAGCCACATAGTATTTTAATTTTAT  249
      ||||| |||||||||||||| ||||||| ||||||||||||  | |||||
seq2  TCAGC-TCGTCTAGCTGCTT-CTAACAG-CACATAGTATTT--AATTTAT  221

seq1  TGTTTAATACAGGTTTTCTACTCTATATTTAGTTGTCTTCTTGCATTTAT  299
      ||||| ||||||| ||||||||||||||| || ||||||| |||| ||||
seq2  TGTTT-ATACAGG-TTTCTACTCTATATTAAG-TGTCTTC-TGCA-TTAT  266

seq1  CTACATTTGACAT-AAAAAGCAGATGATAGGGGGAGGCATCTTAGAAGGA  348
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CTACATTTGACATAAAAAAGCAGATGATAGGGGGAGGCATCTTAGAAGGA  316

seq1  GAGGGAGTAAAGCTAAGGAGAGGAATGAGGGAGT-AAATATGAAGAAGGC  397
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GAGGGAGTAAAGCTAAGGAGAGGAATGAGGGAGTAAAATATGAAGAAGGC  366

seq1  ACAATAATACACACATATGGAAAAGCCACAGTGAAGTCCATTACTTCTGC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAATACACACATATGGAAAAGCCACAGTGAAGTCCATTACTTCTGC  416

seq1  ACTAACTAAAGAATAAAAATTTTAATTGGAATGCGAAACAGTTTCTGGTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACTAAAGAATAAAAATTTTAATTGGAATGCGAAACAGTTTCTGGTT  466

seq1  GGCAAGCTATCTCAGTGGGTAAGGGCTTTTTTGCCTTTGAGCCTGAAGAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGCTATCTCAGTGGGTAAGGGCTTTTTTGCCTTTGAGCCTGAAGAC  516

seq1  CAGAGTTTGAGACTGACCCCTAAGTGCTAATCTCTGACCACTAGTCAAAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTTTGAGACTGACCCCTAAGTGCTAATCTCTGACCACTAGTCAAAC  566

seq1  ATGTGGATACACACACACACACAGAGGCAAATGGGCATGCACATGCTTGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGATACACACACACACACAGAGGCAAATGGGCATGCACATGCTTGC  616

seq1  ACATGTACACACACAGATGCATACGCAAAATAAATGAATGTCATAAAAAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTACACACACAGATGCATACGCAAAATAAATGAATGTCATAAAAAT  666

seq1  GTTTGGACAGTTTCAGATCTGTATTTTCCTATTAAGGGCATAAAAGCAAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGACAGTTTCAGATCTGTATTTTCCTATTAAGGGCATAAAAGCAAC  716

seq1  AAAAGCTATGCCAACATAATAGAAAACATTGAGGAATCTGAAACAGTTTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTATGCCAACATAATAGAAAACATTGAGGAATCTGAAACAGTTTT  766

seq1  GGCTCCAAGCATTTTGGACAAAGGATACACAACCTGACACATTGTTAGGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCAAGCATTTTGGACAAAGGATACACAACCTGACACATTGTTAGGA  816

seq1  AGTTTGACTGTCTATAGAGTTCTATCTTATTTATCGAAGCCTACCTTGGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGACTGTCTATAGAGTTCTATCTTATTTATCGAAGCCTACCTTGGT  866

seq1  AAAGGACTATGAGAAAACAGTAATGGCTACTGCCTTGCCCAAGGCTTCTA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGACTATGAGAAAACAGTAATGGCTACTGCCTTGCCCAAGGCTTCTA  916

seq1  ATCTCTTGGTGATTTAGGTGTTAGCTCAGATCCTTGGCTTTCAAACAGTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTTGGTGATTTAGGTGTTAGCTCAGATCCTTGGCTTTCAAACAGTT  966

seq1  AATATCTTAAATATTTTGCATAAGTTTGAATCTTAAAGTAGTTAAGCACC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTTAAATATTTTGCATAAGTTTGAATCTTAAAGTAGTTAAGCACC  1016

seq1  TTTTCCAAGGTTATATGTCTATTAAAAGACATAAATAGATTTTAAATATA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAAGGTTATATGTCTATTAAAAGACATAAATAGATTTTAAATATA  1066

seq1  AATTCTTAAAAGGTGTCCAGAACACTTTGCTTTTAGAGTGAAAAGAATTC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTAAAAGGTGTCCAGAACACTTTGCTTTTAGAGTGAAAAGAATTC  1116