BAC Information

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BAC

Clone NameB6Ng01-125O11
Chromosome7 (Build37)12 (Build37)
Map Location 143,940,959 - 143,941,06098,428,547 - 98,429,679
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668764, LOC546009, EG621677
Downstream geneEG668771, Mgmt, EG621804, Ebf3, 9430038I01Rik, Txnl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125O11.bB6Ng01-125O11.g
ACCDH928410DH928411
length1051,133
definitionDH928410|Mus musculus domesticus DNA, BAC clone: B6Ng01-125O11, 5' end.DH928411|Mus musculus domesticus DNA, BAC clone: B6Ng01-125O11, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(143,940,959 - 143,941,060)(98,428,547 - 98,429,679)
sequence
acctctgtatttgtcaggcactggtagagcctctcaggagacagctatat
caggctcctgttagcaagcatttgttggcatctacaataatgtctgggtt
tggtg
gaattctgtgaaaatcctctttgttttctgagcagtaaaaaattggcaaa
gaagaattgatctgtaggactataacgtgatggttatcaaaggaacactt
accctcaacaactttgtaagtcaaaactttataagagcctctcatagcct
tggatcttcacatgaaagcaacatctagtaagttacatttgaactttact
taaaactgtactacagtcgggcggtggtggcacacacctttaatcccagc
actcgggaggcagaggcaggcggatttctgagttcgaggccagcctggtc
tacaaagtgagttccaggacagccaggactatacagagaaaccctgtctc
gaaaaaaccaaaaccaaaacaaacaaacaaaaaaaaagatcatgcaaaga
acttaacctacattgtctacagtcatgggtacagaagatagagtttggca
tatgcctagaaaaacaaatcctgaagattgcactgtgacatgccacacag
aatcaaaggatatacaatttttcctctatgccagatagaaataatctatg
taagaatcagcaaacatctgtgttatattctgtctatgatagtcaccaag
tcagtaataaaaaactcccaaggcagctaaagctaacttcatcttcagag
gaggagcctgaaagtcatgctggggtgtaaccaagattgatcatggagtc
tgttgggtacataagtccaaggaaagacctaacagtgcttccaaaccctg
tgtagcctctggtctattggtgatataaatgggtaaatgcttttattcct
tcagcaagctttttttttccttatatattatgcttcttgtagaaaatcaa
ggtcattgtttctgcattatataatctataatattgacagagaatctgga
aatgtttgaatgtatcttcaaacattgttagagggcactagatatacagg
ttttttcttgagtattttgatgaaaagagaatagtgaatagattataaca
tactgaaacttattacggagattaaatatattgggagagttattatggaa
ccctatttatgtaaccccagaatgtgaattccaaagaatgaatatattct
gtgtatgaatattggttgggtttggtttgtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_143940959_143941060
seq2: B6Ng01-125O11.b_57_158 (reverse)

seq1  CACCAAACCCAGACACTATTGCAGATGCCAACAAGACCTTGCTGACAGAA  50
      ||||||||||||||| ||||| ||||||||||||   |||||| |||| |
seq2  CACCAAACCCAGACATTATTGTAGATGCCAACAAATGCTTGCTAACAGGA  50

seq1  GCCTGATATAGCTGTCTCCTGAGAGGCTTTGCCAGTGCCTGACTAATACA  100
      |||||||||||||||||||||||||||| | |||||||||||| ||||||
seq2  GCCTGATATAGCTGTCTCCTGAGAGGCTCTACCAGTGCCTGACAAATACA  100

seq1  GA  102
      ||
seq2  GA  102

seq1: chr12_98428547_98429679
seq2: B6Ng01-125O11.g_69_1201

seq1  GAATTCTGTGAAAATCCTCTTTGTTTTCTGAGCAGTAAAAAATTGGCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGAAAATCCTCTTTGTTTTCTGAGCAGTAAAAAATTGGCAAA  50

seq1  GAAGAATTGATCTGTAGGACTATAACGTGATGGTTATCAAAGGAACACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATTGATCTGTAGGACTATAACGTGATGGTTATCAAAGGAACACTT  100

seq1  ACCCTCAACAACTTTGTAAGTCAAAACTTTATAAGAGCCTCTCATAGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCAACAACTTTGTAAGTCAAAACTTTATAAGAGCCTCTCATAGCCT  150

seq1  TGGATCTTCACATGAAAGCAACATCTAGTAAGTTACATTTGAACTTTACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCTTCACATGAAAGCAACATCTAGTAAGTTACATTTGAACTTTACT  200

seq1  TAAAACTGTACTACAGTCGGGCGGTGGTGGCACACACCTTTAATCCCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTGTACTACAGTCGGGCGGTGGTGGCACACACCTTTAATCCCAGC  250

seq1  ACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTC  300

seq1  TACAAAGTGAGTTCCAGGACAGCCAGGACTATACAGAGAAACCCTGTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGTGAGTTCCAGGACAGCCAGGACTATACAGAGAAACCCTGTCTC  350

seq1  GAAAAAACCAAAACCAAAACAAACAAACAAAAAAAAAGATCATGCAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAACCAAAACCAAAACAAACAAACAAAAAAAAAGATCATGCAAAGA  400

seq1  ACTTAACCTACATTGTCTACAGTCATGGGTACAGAAGATAGAGTTTGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAACCTACATTGTCTACAGTCATGGGTACAGAAGATAGAGTTTGGCA  450

seq1  TATGCCTAGAAAAACAAATCCTGAAGATTGCACTGTGACATGCCACACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCTAGAAAAACAAATCCTGAAGATTGCACTGTGACATGCCACACAG  500

seq1  AATCAAAGGATATACAATTTTTCCTCTATGCCAGATAGAAATAATCTATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAAGGATATACAATTTTTCCTCTATGCCAGATAGAAATAATCTATG  550

seq1  TAAGAATCAGCAAACATCTGTGTTATATTCTGTCTATGATAGTCACCAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATCAGCAAACATCTGTGTTATATTCTGTCTATGATAGTCACCAAG  600

seq1  TCAGTAATAAAAAACTCCCAAGGCAGCTAAAGCTAACTTCATCTTCAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAATAAAAAACTCCCAAGGCAGCTAAAGCTAACTTCATCTTCAGAG  650

seq1  GAGGAGCCTGAAAGTCATGCTGGGGTGTAACCAAGATTGATCATGGAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGCCTGAAAGTCATGCTGGGGTGTAACCAAGATTGATCATGGAGTC  700

seq1  TGTTGGGTACATAAGTCCAAGGAAAGACCTAACAGTGCTTCCAAACCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGGTACATAAGTCCAAGGAAAGACCTAACAGTGCTTCCAAACCCTG  750

seq1  TGTAGCCTCTGGTCTATTGGTGATATAAATGGGTAAATGCTTTTATTCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCCTCTGGTCTATTGGTGATATAAATGGGTAAATGCTTTTATTCCT  800

seq1  TCAGCAAGCTTTTTTTTTCCTTATATATTATGCTTCTTGTAGAAAATC-A  849
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TCAGCAAGCTTTTTTTTTCCTTATATATTATGCTTCTTGTAGAAAATCAA  850

seq1  GGTCATTGTTTCTGCATTATATAATCTATAATATTGACAGAGGAATCTGG  899
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GGTCATTGTTTCTGCATTATATAATCTATAATATTGACAGA-GAATCTGG  899

seq1  AAATGTTTGAATGTATCTTCAAACATTGTTAGAGGGCACTAGATATAACA  949
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAATGTTTGAATGTATCTTCAAACATTGTTAGAGGGCACTAGATAT-ACA  948

seq1  GGTATATTCTTGAGTATTTTGATGGAAAAGAGAATAAGTGAATAGGATAT  999
      ||| | ||||||||||||||||| ||||||||||| |||||||||  |||
seq2  GGTTTTTTCTTGAGTATTTTGAT-GAAAAGAGAAT-AGTGAATAGATTAT  996

seq1  AAACATACTGAAATTTATTAAGGAAGATTAAA-ATATATGGAGAAGTATT  1048
       |||||||||||| |||||| || |||||||| ||||  |||||  ||||
seq2  -AACATACTGAAACTTATTACGG-AGATTAAATATATTGGGAGAGTTATT  1044

seq1  ATGG-ACCCTATTTATGTAA-CCCAGAATTGTGAGTTTTCAAAGAATGAT  1096
      |||| ||||||||||||||| ||||||| |||||  || |||||||||| 
seq2  ATGGAACCCTATTTATGTAACCCCAGAA-TGTGA-ATTCCAAAGAATGA-  1091

seq1  ATATTTCCTGTGTA-GTATATTGTTTTGGT----TTTGTTTT  1133
      |||| | ||||||| | |||||| || |||    ||||||||
seq2  ATATATTCTGTGTATGAATATTGGTTGGGTTTGGTTTGTTTT  1133