BAC Information

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BAC

Clone NameB6Ng01-126D07
Chromosome7 (Build37)
Map Location 56,101,628 - 56,102,565
singlet/doubletsinglet
Overlap genenone
Upstream geneMrgpra18-ps, EG435978, Mrgprc2-ps, Mrgpra4, Mrgprx1, Mrgprb7-ps, Mrgprb12-ps, EG270335, Mrgprb5, Mrgprb4, Mrgprb13, Mrgprb8, Mrgprb1, Mrgprx2, Mrgprb2, Mrgprb9-ps, Mrgprb3, EG639116, Zdhhc13, Csrp3
Downstream geneE2f8, LOC100040465, 9130015G15Rik, 5330421F07Rik, Dbx1, Htatip2, Prmt3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126D07.bB6Ng01-126D07.g
ACCDH928638DH928639
length1,240928
definitionDH928638|Mus musculus domesticus DNA, BAC clone: B6Ng01-126D07, 5' end.DH928639|Mus musculus domesticus DNA, BAC clone: B6Ng01-126D07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcagctccttcttcagcaccatgcctgtctgaaagctgccatgc
ttcctgccatgatggaattttgacccttaaaagagttgtctgtcaggcca
gaggacaggtgtctgcctggcccgggagcctttgcctcaggatcagcgag
agccatcttggttccgaaactgcacagaaagtagtctgcacaggtgagag
tgtgcactacagaagctaacagcttctgggacaggagggagccacagagc
ttctgaggcagcgtccttttcgggctccagacatccagccaccttcccgg
ccagaggtcaggtatccgtccagccctggagggtgttgcctcagcatcag
cagaagacatattagttcaagactccgccaaaagtaatctgcacgggtga
gagtgtgtactacagaagctaacagcttctgtgacaggccaaagcaacac
atcttctgggaaaggtcctgttttgggccttcatcttcggccaggaggga
ggtccgaacgccagatatctgtgcacctcccctgtaagaggagagcttgc
ctgcagagagtactctgaccactgaaactcagagaagagagctagtctcc
cacgtctgctgatagagggtaacagaatcaccagaggaacaatctctaaa
cagacacaactataacaactaactccagagattaccagatggctaaaggt
aaacttaagaatcttactaacagaaaccaagaccactcaccatcatcaga
acccagcactcccacttcgcccagtccagggcacgccaacacacccgaaa
agctagacctgaattaaaagcatatctcatgatgatggtagaggacatca
agaaggactttaataactcacttaaagaaatacaggagaacgctgctaaa
caggtagaagacattaaagaggaagcacaaaaatcccttaaagaattaca
ggaaaacacaaccaaacagtgatggaattgaataaaccatccaagtctaa
aaagggaagtaaacacataagaaaacccaaatgagcacgctggagatcga
aaccctagaagaatcttgaccatgatgaaagcatcagcacgaatacaaga
gatgaagagagatcttcagtgcagagatcaagagaatcgccacccatcaa
gaatggatgccaaggatccttatctcactcggatcgacatgaaagaccac
ctcggatataggatgtatgatgattaatttctcactctag
gaattccttgcccgtgatgagaggtgactcccagtattctctccaggtct
caatcaagggtttcttttcaatatccagtcaatgagaacaagacatggtt
ttaagcaatggcctggatgctgtgcagatcaaagctgccacctctgacgt
ctgttctggcccttagccatggtggtgacccctccatgggggagctgggt
aaccattggagggcgctcgtctaattgtggtgtggtgcaacgccagttaa
taagcagtatggactgcctcctagctcagggctagagcagagggaggcac
aagccgcgaagtagagtaggggaatgggggtagtctgcatactcagtttc
ctttgagggctgagcattaagggaaacaaggtaagaggagcatgctatgc
tggcttttacaaaacaaagaccagggctatctcataggaagcaaggcgat
ggccatctgcatgaaatgaccacagccctctccattacaaaatgctccat
cgttcaaccagttcattgcagtgtgtgtaaaactgttttatgtcccagaa
aatgtggagagtttcctgatttggctttgatttatttctgaataaccctc
tccttggtgttcagtgtgaggagctcccacggttaagaggaggtatagct
gagccagggcttagtgtctgcctggacatacaaaattttctgtcagaggc
aagggagctcagcagagaggcagcctgggggcagaggagcagtggcacca
tgcagcagacaaaccagaggacctcacccaggaaatggaaacagaactta
tgatagatgcagaactgtggatagatgcaaactctttttccttctttgag
actgggtttcttggtagcctggctgtcctgaaactcactttgtaaacagc
ttgcctcgaacctaaaaattccgcctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_56101628_56102565
seq2: B6Ng01-126D07.g_69_996 (reverse)

seq1  GCAGGCGG-ATTTCTAGGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTC  49
      |||||||| |||| |||||||||||| |||   || ||||||||||||| 
seq2  GCAGGCGGAATTTTTAGGTTCGAGGCAAGC--TGTTTACAAAGTGAGTTT  48

seq1  CAGGACAGCCAGGGCTACACAAAGAAACCCAGTCTCAAAAAGAAAGAAAA  99
      ||||||||||| ||||  || |||||||||||||||  |||||| |    
seq2  CAGGACAGCCA-GGCT--ACCAAGAAACCCAGTCTC--AAAGAAGG----  89

seq1  AAAAAAGAGTTTGCATCTAT-CACAGTTCTGCATCTATCAT-AGTTCTGT  147
       ||||||||||||||||||| |||||||||||||||||||| ||||||||
seq2  -AAAAAGAGTTTGCATCTATCCACAGTTCTGCATCTATCATAAGTTCTGT  138

seq1  TTCCATTTCCTGGGTGAGGTCCTTCTGGTTTGTCTGCTGCATGGTGCCAC  197
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTCCATTTCCTGGGTGAGGTCC-TCTGGTTTGTCTGCTGCATGGTGCCAC  187

seq1  TTGCTCCTCTGCCCCCAGGCTGCCTCTCTGCTGAGCTCCCTTGCCTCTGA  247
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TGCTCCTCTGCCCCCAGGCTGCCTCTCTGCTGAGCTCCCTTGCCTCTGA  236

seq1  CAG-ATATTTTGTATGTCCAGGCAGACACTAAGCCCTGGCTCAGCTATAC  296
      ||| | ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATTTTGTATGTCCAGGCAGACACTAAGCCCTGGCTCAGCTATAC  286

seq1  CTCCTCTTAACCGTGGGAGCTCCTCACACTGAACACCAAGGAGAGGGTTA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTTAACCGTGGGAGCTCCTCACACTGAACACCAAGGAGAGGGTTA  336

seq1  TTCAGAAATAAATCAAAGCCAAATCAGGAAACTCTCCACATTTTCTGGGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAATAAATCAAAGCCAAATCAGGAAACTCTCCACATTTTCTGGGA  386

seq1  CATAAAACAGTTTTACACACACTGCAATGAACTGGTTGAACGATGGAGCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAACAGTTTTACACACACTGCAATGAACTGGTTGAACGATGGAGCA  436

seq1  TTTTGTAATGGAGAGGGCTGTGGTCATTTCATGCAGATGGCCATCGCCTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTAATGGAGAGGGCTGTGGTCATTTCATGCAGATGGCCATCGCCTT  486

seq1  GCTTCCTATGAGATAGCCCTGGTCTTTGTTTTGTAAAAGCCAGCATAGCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTATGAGATAGCCCTGGTCTTTGTTTTGTAAAAGCCAGCATAGCA  536

seq1  TGCTCCTCTTACCTTGTTTCCCTTAATGCTCAGCCCTCAAAGGAAACTGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCTCTTACCTTGTTTCCCTTAATGCTCAGCCCTCAAAGGAAACTGA  586

seq1  GTATGCAGACTACCCCCATTCCCCTACTCTACTTCGCGGCTTGTGCCTCC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCAGACTACCCCCATTCCCCTACTCTACTTCGCGGCTTGTGCCTCC  636

seq1  CTCTGCTCTAGCCCTGAGCTAGGAGGCAGTCCATACTGCTTATTAACTGG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTCTAGCCCTGAGCTAGGAGGCAGTCCATACTGCTTATTAACTGG  686

seq1  CGTTGCACCACACCACAATTAGACGAGCGCCCTCCAATGGTTACCCAGCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGCACCACACCACAATTAGACGAGCGCCCTCCAATGGTTACCCAGCT  736

seq1  CCCCCATGGAGGGGTCACCACCATGGCTAAGGGCCAGAACAGACGTCAGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCATGGAGGGGTCACCACCATGGCTAAGGGCCAGAACAGACGTCAGA  786

seq1  GGTGGCAGCTTTGATCTGCACAGCATCCAGGCCATTGCTTAAAACCATGT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCAGCTTTGATCTGCACAGCATCCAGGCCATTGCTTAAAACCATGT  836

seq1  CTTGTTCTCATTGACTGGATATTGAAAAGAAACCCTTGATTGAGACCTGG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTCTCATTGACTGGATATTGAAAAGAAACCCTTGATTGAGACCTGG  886

seq1  AGAGAATACTGGGAGTCACCTCTCATCACGGGCAAGGAATTC  938
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATACTGGGAGTCACCTCTCATCACGGGCAAGGAATTC  928