BAC Information

Click to search

BAC

Clone NameB6Ng01-126G12
Chromosome7 (Build37)
Map Location 140,264,642 - 140,404,306
singlet/doubletdoublet
Overlap geneCtbp2
Upstream geneCpxm2, 4631426J05Rik, LOC100043682, LOC100043683, Oat, Nkx1-2, 2310007H09Rik, A930008G19Rik, 2010208K18Rik, C430003P19Rik, Zranb1
Downstream geneLOC668747, 4930404H21Rik, LOC100043237, 2700050L05Rik, Mmp21, Uros, Bccip, Dhx32, LOC100043695, Fank1, Adam12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126G12.bB6Ng01-126G12.g
ACCDH928784DH928785
length8621,103
definitionDH928784|Mus musculus domesticus DNA, BAC clone: B6Ng01-126G12, 5' end.DH928785|Mus musculus domesticus DNA, BAC clone: B6Ng01-126G12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(140,403,779 - 140,404,306)(140,264,642 - 140,265,763)
sequence
gaattcaaggccagcctggtctacagagtaagctccaggacagtcagcat
tgaactttaaataaacttctcattttaaaagctgttaagactctgagaga
ctacggggacttttgatgttggactaaacgcattttacattatgttatga
ccactagacaatgggagccaaagagtggactgtggtggtttgaatgagat
gttcactatttgaatacttggttcacagttggtagcactgttttgagtac
gtcactggaggtggttcaacggttcaggccatttctagttcactctctgc
ttcccaactgttgctcaaaatgtgaccctcagtgtctcctccagctgctc
tgtctgctgcttgctgctatgcctccccagcaggcggctctctttcccct
ctgggatcaaaagctgagtaaaccttccattctctgagttgccttagtca
tggtgttttatcacaacaatagaaacataactaatatgtgcaggctgaat
tacttaaaacatgccatctgtagtacagtgcccagtgaattcctggaacc
atcacacacatggtgccctgtgtgtgatcatggcttggtgatcctctata
atactaggtatgacactttagactcgcatctgaagtgctacctgctccat
tattttaatcgccagaaaaatatagaatagaaaccatgcatagtggtata
cacctaaatttaatctagcacttggaaggtagagacaggaggaaatctgt
gagttcacagccagcctggtctacataatgagctctaagagccagagcta
ccacagtgagaccatatcaagaaaaaaagaaagaaaaaggggaggaggga
gttggtggagga
gaattctcttcctagattgcaaatcaaaatctgcatttaaatagaatttt
tttaatgtagaaaagaggaagccctagggcacaaggtatttcattcaata
cctatgggtacaacatcgcattcaaaatgagatgcggcattttcaaagtt
actgaatagattacacactccagattgtctagttattactgtttttacta
aattcttctcttaataagtacgtttcttttacggccagggctgttaataa
aagtaactcagtattacatcattctatcaatttaatcttgagaaaagatt
gcacgatcccagatctcaaaagctgtgggctctgataattctagccatta
ttcagcgtgaaattcaaacagtctgaattcattaacgttcgttgttacaa
atctgcatttttagactttgccataaaacgcaggagtccaaacccagtga
cctgaatctaacagcctttcatgtctagtggtgggtgctcaccagcattt
cccccaattctctcagataaagccccatcatgtcctcatcctctcccagg
ctggggagagatggaggctgcaagagacctcactcaggccctgctaacta
tgagttgaaggtattcccctcccgtaggtcaaatgttggacgcttgatcc
taaattcagatgaggtcatgtatttggagatgtagcctttgagaaataaa
caaaaaaatcagggaaagctacgagggtggtaccctgcggcagtttgact
agctctgtgccctaaccaccttgtgagaggctctctctcaccctatggca
cacaaggcagccctttaatgactgtgttccagagtccttggctctgagca
gattgaaaataattgttttcttcataagtcaacagtctttagtatacaga
tagaagtttcatgcaaattgtgggtctcaagccatcaagagggacacgag
atgcacactgtagcagtgttccctctactgcatgcaccatcaagagcagc
gctgacccatcgcatcatggttccagcatatctccaaagtggcaagaatt
tagactgatccgggagaactcccactgccattgctggtgtaagaaccact
agg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_140403779_140404306
seq2: B6Ng01-126G12.b_380_908 (reverse)

seq1  TCCTCCACC-ACTCCCTCCTCCCCTTTTTCTTTCTTTTTTTCTTGATATG  49
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCACCAACTCCCTCCTCCCCTTTTTCTTTCTTTTTTTCTTGATATG  50

seq1  GTCTCACTGTGGTAGCTCTGGCTCTTAGAGCTCATTATGTAGACCAGGCT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCACTGTGGTAGCTCTGGCTCTTAGAGCTCATTATGTAGACCAGGCT  100

seq1  GGCTGTGAACTCACAGATTTCCTCCTGTCTCTACCTTCCAAGTGCTAGAT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTGAACTCACAGATTTCCTCCTGTCTCTACCTTCCAAGTGCTAGAT  150

seq1  TAAATTTAGGTGTATACCACTATGCATGGTTTCTATTCTATATTTTTCTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTAGGTGTATACCACTATGCATGGTTTCTATTCTATATTTTTCTG  200

seq1  GCGATTAAAATAATGGAGCAGGTAGCACTTCAGATGCGAGTCTAAAGTGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGATTAAAATAATGGAGCAGGTAGCACTTCAGATGCGAGTCTAAAGTGT  250

seq1  CATACCTAGTATTATAGAGGATCACCAAGCCATGATCACACACAGGGCAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCTAGTATTATAGAGGATCACCAAGCCATGATCACACACAGGGCAC  300

seq1  CATGTGTGTGATGGTTCCAGGAATTCACTGGGCACTGTACTACAGATGGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTGTGATGGTTCCAGGAATTCACTGGGCACTGTACTACAGATGGC  350

seq1  ATGTTTTAAGTAATTCAGCCTGCACATATTAGTTATGTTTCTATTGTTGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTAAGTAATTCAGCCTGCACATATTAGTTATGTTTCTATTGTTGT  400

seq1  GATAAAACACCATGACTAAGGCAACTCAGAGAATGGAAGGTTTACTCAGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAACACCATGACTAAGGCAACTCAGAGAATGGAAGGTTTACTCAGC  450

seq1  TTTTGATCCCAGAGGGGAAAGAGAGCCGCCTGCTGGGGAGGCATAGCAGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATCCCAGAGGGGAAAGAGAGCCGCCTGCTGGGGAGGCATAGCAGC  500

seq1  AAGCAGCAGACAGAGCAGCTGGAGGAGAC  528
      |||||||||||||||||||||||||||||
seq2  AAGCAGCAGACAGAGCAGCTGGAGGAGAC  529

seq1: chr7_140264642_140265763
seq2: B6Ng01-126G12.g_69_1171

seq1  GAATTCTCTTCCTAGATTGCAAATCAAAATCTGCATTTAAATAGAATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTCCTAGATTGCAAATCAAAATCTGCATTTAAATAGAATTTT  50

seq1  TTTAATGTAGAAAAGAGGAAGCCCTAGGGCACAAGGTATTTCATTCAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGTAGAAAAGAGGAAGCCCTAGGGCACAAGGTATTTCATTCAATA  100

seq1  CCTATGGGTACAACATCGCATTCAAAATGAGATGCGGCATTTTCAAAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGGGTACAACATCGCATTCAAAATGAGATGCGGCATTTTCAAAGTT  150

seq1  ACTGAATAGATTACACACTCCAGATTGTCTAGTTATTACTGTTTTTACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAATAGATTACACACTCCAGATTGTCTAGTTATTACTGTTTTTACTA  200

seq1  AATTCTTCTCTTAATAAGTACGTTTCTTTTACGGCCAGGGCTGTTAATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTCTCTTAATAAGTACGTTTCTTTTACGGCCAGGGCTGTTAATAA  250

seq1  AAGTAACTCAGTATTACATCATTCTATCAATTTAATCTTGAGAAAAGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAACTCAGTATTACATCATTCTATCAATTTAATCTTGAGAAAAGATT  300

seq1  GCACGATCCCAGATCTCAAAAGCTGTGGGCTCTGATAATTCTAGCCATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGATCCCAGATCTCAAAAGCTGTGGGCTCTGATAATTCTAGCCATTA  350

seq1  TTCAGCGTGAAATTCAAACAGTCTGAATTCATTAACGTTCGTTGTTACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCGTGAAATTCAAACAGTCTGAATTCATTAACGTTCGTTGTTACAA  400

seq1  ATCTGCATTTTTAGACTTTGCCATAAAACGCAGGAGTCCAAACCCAGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCATTTTTAGACTTTGCCATAAAACGCAGGAGTCCAAACCCAGTGA  450

seq1  CCTGAATCTAACAGCCTTTCATGTCTAGTGGTGGGTGCTCACCAGCATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAATCTAACAGCCTTTCATGTCTAGTGGTGGGTGCTCACCAGCATTT  500

seq1  CCCCCAATTCTCTCAGATAAAGCCCCATCATGTCCTCATCCTCTCCCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAATTCTCTCAGATAAAGCCCCATCATGTCCTCATCCTCTCCCAGG  550

seq1  CTGGGGAGAGATGGAGGCTGCAAGAGACCTCACTCAGGCCCTGCTAACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGAGAGATGGAGGCTGCAAGAGACCTCACTCAGGCCCTGCTAACTA  600

seq1  TGAGTTGAAGGTATTCCCCTCCCGTAGGTCAAATGTTGGACGCTTGATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTGAAGGTATTCCCCTCCCGTAGGTCAAATGTTGGACGCTTGATCC  650

seq1  TAAATTCAGATGAGGTCATGTATTTGGAGATGTAGCCTTTGAGAAATAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCAGATGAGGTCATGTATTTGGAGATGTAGCCTTTGAGAAATAAA  700

seq1  CAAAAAAATCAGGGAAAGCTACGAGGGTGGTACCCTGCGGCAGTTTGACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAATCAGGGAAAGCTACGAGGGTGGTACCCTGCGGCAGTTTGACT  750

seq1  AGCTCTGTGCCCTAACCACCTTGTGAGAGGCTCTCTCTCACCCTATGGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGTGCCCTAACCACCTTGTGAGAGGCTCTCTCTCACCCTATGGCA  800

seq1  CACAAGGCAGCCCTCTAATGACTGTGTTTCCAGAGTCCTTGGCTCTGAGC  850
      |||||||||||||| ||||||||||| |||||||||||||||||||||||
seq2  CACAAGGCAGCCCTTTAATGACTGTG-TTCCAGAGTCCTTGGCTCTGAGC  849

seq1  AGATTGAAAATAATTGTTTTTCTTCATAAGTCAACAGTCTTTAGTATACA  900
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGATTGAAAATAATTG-TTTTCTTCATAAGTCAACAGTCTTTAGTATACA  898

seq1  GATAGAAGTTTCAGGCAAATTGTGGGGTCTCAAGCCATCAAGAGGGACAC  950
      ||||||||||||| ||||||||| ||||||||||||||||||||||||||
seq2  GATAGAAGTTTCATGCAAATTGT-GGGTCTCAAGCCATCAAGAGGGACAC  947

seq1  GAAGGATGCACACTGTTAGCAGGTGTTCACTCTACTGCATGCACCCATCA  1000
      ||  ||||||||||| ||||| |||||| |||||||||||||| ||||| 
seq2  GA--GATGCACACTG-TAGCA-GTGTTCCCTCTACTGCATGCA-CCATC-  991

seq1  TAGGAGCAGGCGGCTGACGCATCGCATCATGGTACCAGCATATCCTCCAC  1050
       | ||||||   |||||| |||||||||||||| ||||||||| ||||  
seq2  -AAGAGCAG--CGCTGACCCATCGCATCATGGTTCCAGCATAT-CTCC--  1035

seq1  AAAAGTGGGCAAGAA-TTAGACTTGAACCCGGAGACATCCCAAACCTGCC  1099
       ||||| |||||||| |||||| ||| || |||||  |||||   |||||
seq2  -AAAGT-GGCAAGAATTTAGAC-TGATCCGGGAGAACTCCCA---CTGCC  1079

seq1  ATGGCTGG-GTGAAGACCACTAGG  1122
      || ||||| || |  |||||||||
seq2  ATTGCTGGTGTAAGAACCACTAGG  1103