BAC Information

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BAC

Clone NameB6Ng01-126H13
Chromosome7 (Build37)
Map Location 8,787,847 - 8,789,018
singlet/doubletsinglet
Overlap geneLOC100041998
Upstream geneVmn2r-ps40, Vmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989
Downstream geneLOC100042009, LOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145, EG545909, LOC100042039, LOC100042781, LOC665539, LOC100042795, LOC100042060, EG665552, LOC100042790, LOC100042803, LOC665598, LOC100042810, LOC665593, EG665582, EG434113, EG665577
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126H13.bB6Ng01-126H13.g
ACCDH928834DH928835
length1,2651,150
definitionDH928834|Mus musculus domesticus DNA, BAC clone: B6Ng01-126H13, 5' end.DH928835|Mus musculus domesticus DNA, BAC clone: B6Ng01-126H13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatgatcgtgagcccactgtcgtacttctctggctgtgaaatga
gttccttggtcagaagcaatactgtgtggaataccatgacgatagatgag
gcattctgtcagtccgtgaatggtggttttagcagaggcattacgtgcag
gaaaggcaaatccataaccagaataagtatctactccagtaagaacaaaa
cgctgtcctttccacgaaggaagtggtccaatgtagtcaacctgccacca
ggttgctggctggtcacctcgaggaatggtgccatatctggggctcagtg
ttggtttctgctgttggcagatctggcaatcagcagcagctgtagccagg
tcagccttggtgagtggaagcccgtgttgctgagcccaagcataacctcc
atctcgaccaccatgaccactttgttcatgtgcccattgagcaatgacag
ggatggctggggagagaggctgactgtccacagaacgggtcatcttatcc
acttgattattgaactcctcctcggctgaagtcaccttttggtgagcatt
tacatgggacacaaatatcttcacatcctttgcccatttggagagatcta
tccacatacttcttccccagatgtctttctcaccaattttccaattgtga
tctttccaagtccctgaccatccagccaatccattggctacagcccatga
gtcagtgaataatcgtacatctgaccatttcttcttgcaaacaaactgta
ataccatgtgtactgcccgaagttctgcccactgtgaagatttcccttca
cccgtgtctttcaaggttatcccagaaaggggttgtaatgctgcagctgt
ccacttctgggtggtgcctgattaacgtgcagagccatcagtaaaccagg
ctctagtcttctcctcttcggtcagtcgatcatagggaacaccccatgag
gctataggcacatgtttggcagcagatggcattgtaacaggagtagaaac
catagcatttgagcactcttcatgtaacttgctgtggccttcaggactgc
tctgccgatcacgtaatataccacttccattgataatagactgctgctgg
gcgcgttcccacttatgactgcagtctgaatgtacccagcttatgatggt
aatccaggtccacatagtaactggatgttctaattgtcaacggtcagttc
cctaggccatgacaggcaggagctttttcaaggagaaatagtggttctgc
tgcccagatagatag
gaattcaaatattaacgtgactaaatattttttggaaaatggagtgactt
tttattttattggaaataaagaacaaagcatggcatattttctgggtctt
gttgagcctttaaactcaatctttaccatgtaaattaactgtggatatgt
gaagaatgtatgatttcagatagagctggattacctatacttgagatttg
atctgtttatagatcttcaagataatggaagcacaggtcttgtttagata
ttactatcacttctgtaacatagtccacactgtacatggtctgtggatct
cagtgactgtaaacatgagtctgcctctgcatgacttggactgtgtaata
aagtgtcctgtatgtcctcagtagctccagttttgctatttctggatgtc
ttactgtgaataatgtgatacaaaccactgacatcatttctaactgtgtt
cacataagcagattgttgaaactttccagggaccaaatttgaacacaggg
gcttccttccacagattcacaaacatgactgatatcatggagactgagaa
tgaattatcctcctaagtatttacctacatgtgtttattacatgggctgt
ggacaccagtttcagagccccagggaagaaagtatttaagtttcttcagg
gctcaggagaaacctaaaaatataatgagtcatgaatatgcaataaacct
caccattgcacaaagaaataaatgcaaggagaaatttgatgtgctgatat
gcatgactcatcacaatccacactgcccagatttaacacaggaaaaatat
gttcactttgatgggagtcttcttcttgcttaacattccacttttcatgg
ccaactttattgatcccaggtgcttttggagaataaatttgaatgaattc
agatgatatttgggattaacttgtgctttcatcctggcagtagttcagaa
cctattgagaaagattatttcacagactctgatttcctgtagtaaatttg
agttcaattgaatgacactcaggtacttcttgaggtgctccgaggatatt
agtcaatctttagtcttctttctgttgcttagtctgacaccaagaaccac
cttaatctatcatttcaaacctacttttccttttaatgaatccagggagg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_8787847_8789018
seq2: B6Ng01-126H13.g_68_1217

seq1  GAATTCAAATATTAACGTGACTAAATATTTTTTGGAAAATGGAGTGACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATATTAACGTGACTAAATATTTTTTGGAAAATGGAGTGACTT  50

seq1  TTTATTTTATTGGAAATAAAGAACAAAGCATGGCATATTTTCTGGGTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTATTGGAAATAAAGAACAAAGCATGGCATATTTTCTGGGTCTT  100

seq1  GTTGAGCCTTTAAACTCAATCTTTACCATGTAAATTAACTGTGGATATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGCCTTTAAACTCAATCTTTACCATGTAAATTAACTGTGGATATGT  150

seq1  GAAGAATGTATGATTTCAGATAGAGCTGGATTACCTATACTTGAGATTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATGTATGATTTCAGATAGAGCTGGATTACCTATACTTGAGATTTG  200

seq1  ATCTGTTTATAGATCTTCAAGATAATGGAAGCACAGGTCTTGTTTAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTTATAGATCTTCAAGATAATGGAAGCACAGGTCTTGTTTAGATA  250

seq1  TTACTATCACTTCTGTAACATAGTCCACACTGTACATGGTCTGTGGATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTATCACTTCTGTAACATAGTCCACACTGTACATGGTCTGTGGATCT  300

seq1  CAGTGACTGTAAACATGAGTCTGCCTCTGCATGACTTGGACTGTGTAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGACTGTAAACATGAGTCTGCCTCTGCATGACTTGGACTGTGTAATA  350

seq1  AAGTGTCCTGTATGTCCTCAGTAGCTCCAGTTTTGCTATTTCTGGATGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTCCTGTATGTCCTCAGTAGCTCCAGTTTTGCTATTTCTGGATGTC  400

seq1  TTACTGTGAATAATGTGATACAAACCACTGACATCATTTCTAACTGTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTGAATAATGTGATACAAACCACTGACATCATTTCTAACTGTGTT  450

seq1  CACATAAGCAGATTGTTGAAACTTTCCAGGGACCAAATTTGAACACAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAAGCAGATTGTTGAAACTTTCCAGGGACCAAATTTGAACACAGGG  500

seq1  GCTTCCTTCCACAGATTCACAAACATGACTGATATCATGGAGACTGAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTTCCACAGATTCACAAACATGACTGATATCATGGAGACTGAGAA  550

seq1  TGAATTATCCTCCTAAGTATTTACCTACATGTGTTTATTACATGGGCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTATCCTCCTAAGTATTTACCTACATGTGTTTATTACATGGGCTGT  600

seq1  GGACACCAGTTTCAGAGCCCCAGGGAAGAAAGTATTTAAGTTTCTTCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACCAGTTTCAGAGCCCCAGGGAAGAAAGTATTTAAGTTTCTTCAGG  650

seq1  GCTCAGGAGAAACCTAAAAATATAATGAGTCATGAATATGCAATAAACCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGGAGAAACCTAAAAATATAATGAGTCATGAATATGCAATAAACCT  700

seq1  CACCATTGCACAAAGAAATAAATGCAAGGAGAAATTTGATGTGCTGATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATTGCACAAAGAAATAAATGCAAGGAGAAATTTGATGTGCTGATAT  750

seq1  GCATGACTCATCACAATCCACACTGCCCAGATTTAACACAGGAAAAATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGACTCATCACAATCCACACTGCCCAGATTTAACACAGGAAAAATAT  800

seq1  GTTCACTTTGATGGGAGTCTTCTTCTTGCTTAACATTCCACTTTTCATGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACTTTGATGGGAGTCTTCTTCTTGCTTAACATTCCACTTTTCATGG  850

seq1  CCAACTTTATTGATCCCAGGTGCTTTTGGAGAATAAATTTGAATGAAATT  900
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CCAACTTTATTGATCCCAGGTGCTTTTGGAGAATAAATTTGAATG-AATT  899

seq1  CAGGATGAATATTTGGGATTAACTTGTGCTTTCATCCTGGCAGTAGTTCA  950
      || |||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CA-GATG-ATATTTGGGATTAACTTGTGCTTTCATCCTGGCAGTAGTTCA  947

seq1  GAAACCTATTGAGAAAGATTATTTCAACAAGACTCTGAATTTCCTGTAAG  1000
      | ||||||||||||||||||||||||   |||||||| ||||||||| ||
seq2  G-AACCTATTGAGAAAGATTATTTCA--CAGACTCTG-ATTTCCTGT-AG  992

seq1  TAAATTTGAGTTTCAAATTGAAATGACAACTTCAGTACTTCTTGA-GTGC  1049
      ||||||||||||   ||||| |||||| |||   ||||||||||| ||||
seq2  TAAATTTGAGTT--CAATTG-AATGAC-ACTCAGGTACTTCTTGAGGTGC  1038

seq1  TCCGAGGATATTAGTCAAATTCTTTAGTCTTCTGTCCTGTTGCTAAGTCT  1099
      ||||||||||||||||||  ||||||||||||| | |||||||| |||||
seq2  TCCGAGGATATTAGTCAA--TCTTTAGTCTTCT-TTCTGTTGCTTAGTCT  1085

seq1  GAACACCAAGAACCAACCTTAATTCCTATACATTTTCAAACCTACTTTCT  1149
      | |||||||||||| ||||||||  |||| || ||||||||||||||| |
seq2  G-ACACCAAGAACC-ACCTTAAT--CTAT-CA-TTTCAAACCTACTTT-T  1128

seq1  CCTTTTAATGAATCCAGTGGAGG  1172
      ||||||||||||||||| |||||
seq2  CCTTTTAATGAATCCAG-GGAGG  1150