BAC Information

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BAC

Clone NameB6Ng01-126I15
Chromosome7 (Build37)
Map Location 87,387,410 - 87,559,123
singlet/doubletdoublet
Overlap geneLOC100042379, Ttll13, Ngrn, Vps33b, Prc1, Rccd1, Unc45a, Hddc3, Man2a2, Fes, Furin
Upstream geneAbhd2, Rlbp1, BC025462, Polg, AI854517, Rhcg, 5730590G19Rik, Plin, Pex11a, EG626359, EG665900, Mesp1, Mesp2, Anpep, Ap3s2, 2610034B18Rik, Zfp710, Idh2, Sema4b, Cib1, D330012F22Rik, LOC100042374
Downstream geneLOC384647, Blm, Crtc3, Iqgap1, LOC100042402, Zscan2, Wdr73, Nmb, Sec11a, Zfp592, Alpk3, Slc28a1, EG623286, LOC100043130, Pde8a, EG636544, Rps17, Cpeb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126I15.bB6Ng01-126I15.g
ACCDH928884DH928885
length1,159187
definitionDH928884|Mus musculus domesticus DNA, BAC clone: B6Ng01-126I15, 5' end.DH928885|Mus musculus domesticus DNA, BAC clone: B6Ng01-126I15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,387,410 - 87,388,578)(87,558,937 - 87,559,123)
sequence
gaattctcattcactcctagaactcacgatggagctcaagttgaccttca
acttctgaatttcatgccacctccatatgctagggtcacaggagtctaac
acaggagtctgtacctgtcttatggggtgatggaggtcagacccagggct
ttgtttgcctttggtcatcatcaccctgtccaattcatccacaacccaac
cccatatcttttttaaaaaatgtatcttatttattaacttattgtgtgtg
tgtctagatcacaagataaattttgtgaagccatttctctcctaccttag
tgatcccaaggagtctctaactcaggtcaaaggcttggctgcctttacct
gctgagctgtctgaaagcccctcccttattttttatgcaaatgtatttat
atgaattgtgatgttactaccagaaaccacgatcttgagaacgacatcaa
gtcctaaatatatgcttttcctttttaataaccatatcttgttatagtat
acattttaaatgatattgtacactaagcatatgtatcttacagaattcca
tctaaattatgagctcacgattccagaaaatgtcatacacaacagcctct
taaattgaaaggaagaggggctggtgagatggctcagtgggtaagagcac
ccgactgctcttccaaaggtccaaagttcaaatcccagcaaccacatggt
ggctcacaaccatccgcaacaagatctgactccctcttctggagtgtctg
aagacagctacagtgtactcatatattaataaaataaatctttaaaaaaa
acaaaaaaaattgaaaggaagagcttgatacaggtttcagaatacataaa
catatattaaactggcctattgaaaggcacaatattttatttgtttaatg
ctcagatgtcacgggtaatgtatccttagggtacatttttcctgcacatg
taatgtatgcttgcttacttacttgcaacccctttaagagtaacagaagg
cagattcattagctataataaaaacattccttgattgtacatagaattca
catagatcttccacccccactccaagcctcaggaatgtgagacataagca
gtcaaggcctaaaggatgatagtctgtgaaatgcagtccaggtggaactg
acttgcagt
ctgcgaagctcagatctagctgtgacttgggatctaagtttggctggagg
ccccaactccaggctgcttggctgccctgtgtttcctctggacatgcagt
tctagcttcaggtgcaaacaggcccaggaaataggcaaagggcaacagac
aggaggtgggggaggaagtgaggcaggaggggagagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_87387410_87388578
seq2: B6Ng01-126I15.b_45_1203

seq1  GAATTCTCATTCACTCCTAGAACTCACGATGGAGCTCAAGTTGACCTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATTCACTCCTAGAACTCACGATGGAGCTCAAGTTGACCTTCA  50

seq1  ACTTCTGAATTTCATGCCACCTCCATATGCTAGGGTCACAGGAGTCTAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTGAATTTCATGCCACCTCCATATGCTAGGGTCACAGGAGTCTAAC  100

seq1  ACAGGAGTCTGTACCTGTCTTATGGGGTGATGGAGGTCAGACCCAGGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGTCTGTACCTGTCTTATGGGGTGATGGAGGTCAGACCCAGGGCT  150

seq1  TTGTTTGCCTTTGGTCATCATCACCCTGTCCAATTCATCCACAACCCAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGCCTTTGGTCATCATCACCCTGTCCAATTCATCCACAACCCAAC  200

seq1  CCCATATCTTTTTTAAAAAATGTATCTTATTTATTAACTTATTGTGTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATATCTTTTTTAAAAAATGTATCTTATTTATTAACTTATTGTGTGTG  250

seq1  TGTCTAGATCACAAGATAAATTTTGTGAAGCCATTTCTCTCCTACCTTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAGATCACAAGATAAATTTTGTGAAGCCATTTCTCTCCTACCTTAG  300

seq1  TGATCCCAAGGAGTCTCTAACTCAGGTCAAAGGCTTGGCTGCCTTTACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCCAAGGAGTCTCTAACTCAGGTCAAAGGCTTGGCTGCCTTTACCT  350

seq1  GCTGAGCTGTCTGAAAGCCCCTCCCTTATTTTTTATGCAAATGTATTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGCTGTCTGAAAGCCCCTCCCTTATTTTTTATGCAAATGTATTTAT  400

seq1  ATGAATTGTGATGTTACTACCAGAAACCACGATCTTGAGAACGACATCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTGTGATGTTACTACCAGAAACCACGATCTTGAGAACGACATCAA  450

seq1  GTCCTAAATATATGCTTTTCCTTTTTAATAACCATATCTTGTTATAGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTAAATATATGCTTTTCCTTTTTAATAACCATATCTTGTTATAGTAT  500

seq1  ACATTTTAAATGATATTGTACACTAAGCATATGTATCTTACAGAATTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTAAATGATATTGTACACTAAGCATATGTATCTTACAGAATTCCA  550

seq1  TCTAAATTATGAGCTCACGATTCCAGAAAATGTCATACACAACAGCCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATTATGAGCTCACGATTCCAGAAAATGTCATACACAACAGCCTCT  600

seq1  TAAATTGAAAGGAAGAGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGAAAGGAAGAGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCAC  650

seq1  CCGACTGCTCTTCCAAAGGTCCAAAGTTCAAATCCCAGCAACCACATGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACTGCTCTTCCAAAGGTCCAAAGTTCAAATCCCAGCAACCACATGGT  700

seq1  GGCTCACAACCATCCGCAACAAGATCTGACTCCCTCTTCTGGAGTGTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCACAACCATCCGCAACAAGATCTGACTCCCTCTTCTGGAGTGTCTG  750

seq1  AAGACAGCTACAGTGTACTCATATATTAATAAAATAAATCTTTAAAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGCTACAGTGTACTCATATATTAATAAAATAAATCTTTAAAAAAA  800

seq1  ACAAAAAAAATTGAAAGGAAGAGCTTGATACAGGTTTCAGAATACATAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAAAATTGAAAGGAAGAGCTTGATACAGGTTTCAGAATACATAAA  850

seq1  CATATATTAAACTGGCCTATTG-AAGGCACAATATTTTATTTGTTTAATG  899
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CATATATTAAACTGGCCTATTGAAAGGCACAATATTTTATTTGTTTAATG  900

seq1  CTCAGATGTCAGGGGTAATGTATCCTTAGGGTACATTTTTCCTGCACATG  949
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTCAGATGTCACGGGTAATGTATCCTTAGGGTACATTTTTCCTGCACATG  950

seq1  TAATGTATGCTTGCTTACTTACTTGCAACCCCTTTAAGGAGTAACAAGAA  999
      ||||||||||||||||||||||||||||||||||||| ||||||| ||||
seq2  TAATGTATGCTTGCTTACTTACTTGCAACCCCTTTAA-GAGTAAC-AGAA  998

seq1  GGCAGATTCATTAGCTATAATAAAAACATT-CTTGAATGTACAAATAGAA  1048
      |||||||||||||||||||||||||||||| ||||| |||||  |||| |
seq2  GGCAGATTCATTAGCTATAATAAAAACATTCCTTGATTGTAC--ATAG-A  1045

seq1  AATCACATAGAATCCTCCACCCCCACTCCAAGGCTCAGGAAATGTGGAGA  1098
      | |||||||| ||| ||||||||||||||||| |||||| ||||| ||||
seq2  ATTCACATAG-ATCTTCCACCCCCACTCCAAGCCTCAGG-AATGT-GAGA  1092

seq1  CATAAAGCAGTC-AGGCCTAGAGGATGAAGAGTTCTGTGAAATGCAGTCC  1147
      ||| |||||||| ||||||| |||||| | || |||||||||||||||||
seq2  CAT-AAGCAGTCAAGGCCTAAAGGATG-ATAG-TCTGTGAAATGCAGTCC  1139

seq1  AGTGTGGACATGACATTGCAGT  1169
      || |||||  |||| |||||||
seq2  AG-GTGGAACTGAC-TTGCAGT  1159

seq1: chr7_87558937_87559123
seq2: B6Ng01-126I15.g_73_259 (reverse)

seq1  CCTCTCCCCTCCTGCCTCACTTCCTCCCCCACCTCCTGTCTGTTGCCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCCCTCCTGCCTCACTTCCTCCCCCACCTCCTGTCTGTTGCCCTT  50

seq1  TGCCTATTTCCTGGGCCTGTTTGCACCTGAAGCTAGAACTGCATGTCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTATTTCCTGGGCCTGTTTGCACCTGAAGCTAGAACTGCATGTCCAG  100

seq1  AGGAAACACAGGGCAGCCAAGCAGCCTGGAGTTGGGGCCTCCAGCCAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAACACAGGGCAGCCAAGCAGCCTGGAGTTGGGGCCTCCAGCCAAAC  150

seq1  TTAGATCCCAAGTCACAGCTAGATCTGAGCTTCGCAG  187
      |||||||||||||||||||||||||||||||||||||
seq2  TTAGATCCCAAGTCACAGCTAGATCTGAGCTTCGCAG  187