BAC Information

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BAC

Clone NameB6Ng01-126L04
Chromosome7 (Build37)
Map Location 108,711,776 - 108,877,198
singlet/doubletdoublet
Overlap geneEG630138, Art2b, Clpb
Upstream geneMrpl48, LOC100041155, Rab6, LOC100041167, Plekhb1, B930006L02Rik, LOC100041204, Tnfrsf19l, Arhgef17, P2ry6, P2ry2, LOC100049539, EG435996, Fchsd2, EG622673, Atg16l2, Stard10, Centd2, Pde2a, Art2a
Downstream genePhox2a, Inppl1, Folr2, Folr1, 3200002M19Rik, F930017I19Rik, 2400001E08Rik, Lrrc51, LOC667222, Numa1, Il18bp, Rnf121, Trpc2, Art5, Art1, Chrna10, Nup98, Frag1, Rhog, Stim1, Rrm1, Olfr543, Olfr544, Olfr545, LOC667284, Olfr547, Olfr548-ps1, Olfr549, Trim21, LOC384699, Olfr550, Olfr551, Olfr552, Olfr553, Olfr554, LOC100040840, Olfr555, Olfr556, Trim68, Olfr557, Olfr558, Olfr33, Olfr559
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126L04.bB6Ng01-126L04.g
ACCDH928998DH928999
length1,1221,073
definitionDH928998|Mus musculus domesticus DNA, BAC clone: B6Ng01-126L04, 5' end.DH928999|Mus musculus domesticus DNA, BAC clone: B6Ng01-126L04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(108,876,069 - 108,877,198)(108,711,776 - 108,712,376)
sequence
gaattctataatttattcacctattgcagaagcagatcaacattttatca
gtgtaaataccatcccctacactaaactttccttaccttattattagaga
ctcaaaaacttctggtttgtgataggttctcatctcagattggctttgaa
cacgtgctggcctcaaacttagtaatctattgcctaggcccctgagggct
ctgattactgtttgtttgtttgtttctttgaggcagggtctcctatagct
ccaggttggcctcaaactctggatcttctggcctctacctcctaagttct
gggctgacaggtgtttcacaacatgtaacttaagatattttctctgtgat
cacacagtaccttctctagatctccactatcacattattattatcatcac
gttactaaaagtcttggtttattgtaaactatgagttccttaagggcaac
acccaggcctgtatcacatttattggcctggagcctaggctggagcctgt
gataggagaggtgctcagcagagtgatggccaatcttcactgtctccttg
attaggcccaaaagcccctagtaagggctaaagcatccagagctgtgtga
gtatgagtttccaaagagaattagctaagcaggggagggggcagagatgg
atggagagacggacaacacaatacccattctggacgtgggtaataccatt
acatatgctggggacctggaaggaataaaaggggcgaggagagaacgcca
gctagcacagcctcactctcctctccttcctacatgctgctctgccacac
cttcccaccgtgataatctaacacctctgaaactgtgagcaaaatgactc
tgctccctttaatattcatactgggtacagtcacagcaataaaaagtttg
actactacagcaaatgcttgataaatgatggaagagacttgctcagaggc
tacacaggacaccagggctgggaagaggttcttgacatctcttcagtagc
tgctctattttctaagagaaagggtttgcacaaaggagatttggtgggtg
ccagagcacactctgacccttctctgggctgctgggtgtgaagttcaaaa
ggcagacggctcaggcaaagaa
gaattctcattacagtcatgtatggcagactacattccatattagaagaa
agttggtgggctcctctgataaatggaggttccctatagatacttaaaat
aacaactaagtcattcccatatgcaaggagtttacaatggtctaggaaga
aggtgggttgtgttctaagaaggaactagagtaaatacttagagtaacag
ctgagtcactcccatatacaggaatttacaaaggtctagggagaaggtag
attatacaatagactagaattgaaactatagtatgaagcccttgcccctg
gcttctaagaataagctgaccttaggtagggctgatttttatcccaggtg
taaacactgatttttatcccagttgtaaactgatttttatcccagttgta
aactgatttttatcccagttgtaaacactgcctggttcctttcagcattt
atctgtttcgtgtaaagagtcgttatgcatcagatgaccttaatgtgtca
cccaacttccttgttttcttctgtaatataagtctgatgctcactttgag
aaattacattcagatccaacactctctggtattcatgtctgcttgttact
ccccaactccttgcccacttgagtaccaggaccctgaattctcccgtggg
ttgaggaactccaactgagccagccctcggcacccatggtctctggggat
aatatgagtcatggacattgacagacctccctgaatcccgacatggccct
cagtggctacattggcaggacttcaccatggcctcaaggtggctgggatg
actacacacaacagactatttcttctcctcctcgaatctcagttcatctc
cttcacatgctcaaactgtgctgcttctctttctttccataatggtactt
tagtgctctgctgcagctggccaagtggtagtgggctctggtggtgcaaa
tgtgtcctagtatctcagtctgcctgggcaaaggctgggcgggtctctga
acatttcccttctgacttgtgtggtgagaaaggcagactgccttgtgtct
atgctgctgacttcagtagaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_108876069_108877198
seq2: B6Ng01-126L04.b_48_1169 (reverse)

seq1  TTCTTTGCCTGGGGCTGTCTGCCCTCTGTTGAAACTTCACACCCAGCAGC  50
      |||||||||| | || ||||||| | ||    ||||||||||||||||||
seq2  TTCTTTGCCT-GAGCCGTCTGCCTTTTG----AACTTCACACCCAGCAGC  45

seq1  ACAGAGAAGGGTCAGGAGTTGTGGCTCTGGCACCCACAAATTCTCCTTTG  100
       ||||||||||||| ||| ||| |||||||||||||| || |||||||||
seq2  CCAGAGAAGGGTCA-GAG-TGT-GCTCTGGCACCCACCAAATCTCCTTTG  92

seq1  TGCAAACCCTTTCTCTTAGAAAATAGAGCAGCTACTGAAGAGATGTCAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAACCCTTTCTCTTAGAAAATAGAGCAGCTACTGAAGAGATGTCAAG  142

seq1  AACCTCTT-CCAGCCCTGGTGTCCTGTGTAGCCTCTGAGCAAGTCTCTTC  199
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCTTCCCAGCCCTGGTGTCCTGTGTAGCCTCTGAGCAAGTCTCTTC  192

seq1  CATCATTTATCAAGCATTTGCTGTAGTAGTCAAACTTTTTATTGCTGTGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATTTATCAAGCATTTGCTGTAGTAGTCAAACTTTTTATTGCTGTGA  242

seq1  CTGTACCCAGTATGAATATTAAAGGGAGCAGAGTCATTTTGCTCACAGTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACCCAGTATGAATATTAAAGGGAGCAGAGTCATTTTGCTCACAGTT  292

seq1  TCAGAGGTGTTAGATTATCACGGTGGGGAAGGTGTGGCAGAGCAGCATGT  349
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCAGAGGTGTTAGATTATCACGGT-GGGAAGGTGTGGCAGAGCAGCATGT  341

seq1  AGGAAGGAGAGGAGAGTGAGGCTGTGCTAGCTGGCGTTCTCTCCTCGCCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGAGAGGAGAGTGAGGCTGTGCTAGCTGGCGTTCTCTCCTCGCCC  391

seq1  CTTTTATTCCTTCCAGGTCCCCAGCATATGTAATGGTATTACCCACGTCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATTCCTTCCAGGTCCCCAGCATATGTAATGGTATTACCCACGTCC  441

seq1  AGAATGGGTATTGTGTTGTCCGTCTCTCCATCCATCTCTGCCCCCTCCCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGGGTATTGTGTTGTCCGTCTCTCCATCCATCTCTGCCCCCTCCCC  491

seq1  TGCTTAGCTAATTCTCTTTGGAAACTCATACTCACACAGCTCTGGATGCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAGCTAATTCTCTTTGGAAACTCATACTCACACAGCTCTGGATGCT  541

seq1  TTAGCCCTTACTAGGGGCTTTTGGGCCTAATCAAGGAGACAGTGAAGATT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCCTTACTAGGGGCTTTTGGGCCTAATCAAGGAGACAGTGAAGATT  591

seq1  GGCCATCACTCTGCTGAGCACCTCTCCTATCACAGGCTCCAGCCTAGGCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATCACTCTGCTGAGCACCTCTCCTATCACAGGCTCCAGCCTAGGCT  641

seq1  CCAGGCCAATAAATGTGATACAGGCCTGGGTGTTGCCCTTAAGGAACTCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCAATAAATGTGATACAGGCCTGGGTGTTGCCCTTAAGGAACTCA  691

seq1  TAGTTTACAATAAACCAAGACTTTTAGTAACGTGATGATAATAATAATGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTACAATAAACCAAGACTTTTAGTAACGTGATGATAATAATAATGT  741

seq1  GATAGTGGAGATCTAGAGAAGGTACTGTGTGATCACAGAGAAAATATCTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTGGAGATCTAGAGAAGGTACTGTGTGATCACAGAGAAAATATCTT  791

seq1  AAGTTACATGTTGTGAAACACCTGTCAGCCCAGAACTTAGGAGGTAGAGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTACATGTTGTGAAACACCTGTCAGCCCAGAACTTAGGAGGTAGAGG  841

seq1  CCAGAAGATCCAGAGTTTGAGGCCAACCTGGAGCTATAGGAGACCCTGCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGATCCAGAGTTTGAGGCCAACCTGGAGCTATAGGAGACCCTGCC  891

seq1  TCAAAGAAACAAACAAACAAACAGTAATCAGAGCCCTCAGGGGCCTAGGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAAACAAACAAACAAACAGTAATCAGAGCCCTCAGGGGCCTAGGC  941

seq1  AATAGATTACTAAGTTTGAGGCCAGCACGTGTTCAAAGCCAATCTGAGAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATTACTAAGTTTGAGGCCAGCACGTGTTCAAAGCCAATCTGAGAT  991

seq1  GAGAACCTATCACAAACCAGAAGTTTTTGAGTCTCTAATAATAAGGTAAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACCTATCACAAACCAGAAGTTTTTGAGTCTCTAATAATAAGGTAAG  1041

seq1  GAAAGTTTAGTGTAGGGGATGGTATTTACACTGATAAAATGTTGATCTGC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTTTAGTGTAGGGGATGGTATTTACACTGATAAAATGTTGATCTGC  1091

seq1  TTCTGCAATAGGTGAATAAATTATAGAATTC  1130
      |||||||||||||||||||||||||||||||
seq2  TTCTGCAATAGGTGAATAAATTATAGAATTC  1122

seq1: chr7_108711776_108712376
seq2: B6Ng01-126L04.g_570_1140

seq1  CAACTTCCTTGTTTTCTTCTGTAATATAAGTCTGATGCTCACTTTGAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTCCTTGTTTTCTTCTGTAATATAAGTCTGATGCTCACTTTGAGAA  50

seq1  ATTACATTCAGATCCAACACTCTCTGGTATTCATGTCTGCTTGTTACTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATTCAGATCCAACACTCTCTGGTATTCATGTCTGCTTGTTACTCC  100

seq1  CCAACTCCTTGCCCACTTGAGTACCAGGACCCTGAATTCTCCCGTGGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTCCTTGCCCACTTGAGTACCAGGACCCTGAATTCTCCCGTGGGTT  150

seq1  GAGGAACTCCAACTGAGCCAGCCCTCGGCACCCATGGTCTCTGGGGATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAACTCCAACTGAGCCAGCCCTCGGCACCCATGGTCTCTGGGGATAA  200

seq1  TATGAGTCATGGACATTGACAGACCTCCCTGAATCCCGACATGGCCCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGTCATGGACATTGACAGACCTCCCTGAATCCCGACATGGCCCTCA  250

seq1  GTGGCTACATTGGCAGGGACTTCACCATGGCCTCAAGGTGGCTGGGATGA  300
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GTGGCTACATTGGCA-GGACTTCACCATGGCCTCAAGGTGGCTGGGATGA  299

seq1  CTACACACAACAGACTA-TTCTTCTCCTCCCTCGAATCTCCAGTTCCATC  349
      ||||||||||||||||| |||||||||| |||||||||| ||||| ||||
seq2  CTACACACAACAGACTATTTCTTCTCCT-CCTCGAATCT-CAGTT-CATC  346

seq1  TCCCTTCACAATGCTCAAACTGTGCTGCTTCTCTTTCTTTCCATAATTGT  399
      | ||||||| ||||||||||||||||||||||||||||||||||||| ||
seq2  T-CCTTCAC-ATGCTCAAACTGTGCTGCTTCTCTTTCTTTCCATAATGGT  394

seq1  ACTTTTAGTGGCTCCTGCTGCAGGCTGGCCAAGTGGTTAGTGGGCCTCTG  449
      || |||||| ||| |||||||| ||||||||||||| ||||||| |||||
seq2  AC-TTTAGT-GCT-CTGCTGCA-GCTGGCCAAGTGG-TAGTGGG-CTCTG  438

seq1  GTGGTGGCAAATGTGTCCCTAGGTATCTCCAGTCTGCCCCTGTGGCATAG  499
      ||||| |||||||||| |||| |||||| |||||||  |||| |||| ||
seq2  GTGGT-GCAAATGTGT-CCTA-GTATCT-CAGTCTG--CCTG-GGCAAAG  481

seq1  AGCTGGGCGGGTCTCTGAACATTTCCCCCTCCTGCACTGTGTGGTGAG-A  548
       |||||||||||||||||||||||  |||| |||   ||||||||||| |
seq2  -GCTGGGCGGGTCTCTGAACATTT--CCCTTCTGACTTGTGTGGTGAGAA  528

seq1  AGGCAGACTGGCCTCTGTGTGTCTATGGCCTGCTGGAGCCCTTCAGTAGA  598
      ||||||||| ||||   ||||||||||  ||||||     ||||||||||
seq2  AGGCAGACT-GCCT---TGTGTCTATG--CTGCTG----ACTTCAGTAGA  568

seq1  ACA  601
      |||
seq2  ACA  571