BAC Information

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BAC

Clone NameB6Ng01-126L12
Chromosome7 (Build37)
Map Location 104,031,692 - 104,156,481
singlet/doubletdoublet
Overlap geneOdz4, Nars2
Upstream geneFrda-ps, EG666836, LOC670727, LOC666858
Downstream geneGab2, LOC100040457, Usp35, EG622320, Alg8, Ndufc2, Thrsp, Kctd14, Ints4, 1810020D17Rik, Rsf1, LOC622994, LOC100040211, Clns1a, Aqp11, LOC100040594, Pak1, Gdpd4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126L12.bB6Ng01-126L12.g
ACCDH929014DH929015
length5641,021
definitionDH929014|Mus musculus domesticus DNA, BAC clone: B6Ng01-126L12, 5' end.DH929015|Mus musculus domesticus DNA, BAC clone: B6Ng01-126L12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(104,155,912 - 104,156,481)(104,031,692 - 104,032,726)
sequence
cagtttaactctctgactgcatttacttcagctaacaggaccatttattt
gggtggcatggttatcctagcatcttagtaaccctctccgtgctcaatac
ccttctggatgtccaacagttacatatgacttaggtgaagagtaaagcca
ctgttgagtaaatgagtaaccacggttgtttttaaggaaaactagtgagg
aaaaaaaaaaatcaaaatgacaaaaactattctcaatctaactaaaattc
ctcaagcacaaagcatatacagatttttttttctcctaaaaaagtaatta
aaactacctgagcaatttggacagtaactgaaagaagtaacaatatttgc
tttactttttataaatataatcactgtatgtatggacctaattactaagg
attagtttaatgttccctagttaactaatcaatagctgcttcttgacagc
accaacaggcattgcacttcatgaacagtaagttctatgtctaccatccc
tcaaaggatagactggaggctctctctctctctgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtg
gaattcaagagagttcagaagagcaatttcccctgcaaagtcagaatgag
agacaggaaggagtcaggtcacacagccacccttcactcacattattaag
cactccaagtactcggcattcagcagtgatcagcaaatcctggcctctgg
gggctgacattccactgaggaaagactcctaggacactgaagagcctggt
aggaagttcagatccactggaagtacataatccttttggacctcacttta
tctatgacataggcattggtgttgccactcatggagtggggagcatagcc
gccaaggctgtactatggcgcctgcgcataaccactggctgtggtgaggc
ttgtgggttaggaggaaacaggcctgagatctgtcctccaggatcacccc
tctgtcaaaggtaaagataagatcctctagcctacactgtgccatctctt
ctggtttggaagaaaacatggccagggctctgagagtttttgtagtgcaa
agcaggacagtcaagccagagtggtgacacatcagtcatcccagcacctg
ggacgtagccgcaagaggatccgcagttctatgttgtccttcgctgcaca
gccagctcaaagtcagcataggctacaggagacaagggggaaaaaatcaa
accaaaccaacaaataaaaaaggcatgatagtcagaatcaaagcaatgtc
ccagcttcacccaacagctggggctcagaaaactctcctccctgattcct
aaatcctgctgcagtagctctcaggcagtagctctcagcagttcaacgcc
atgcaaaaggggtcccgcagaggaggcccacaaggcagaggtctcaggac
cagaggagaaggctccagcttttccaactcaatgagaggagcacactcag
atgggacatcacatgtatcgatcagaggcgggagccatcgcatctcccaa
gctctggagatacggaattatgactagagacaaacatgtatacattggca
gctgcatctgatgttcattta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_104155912_104156481
seq2: B6Ng01-126L12.b_52_621 (reverse)

seq1  CACACACACACACACACACACACACACACACAGAGAGAGAGAGAGCCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACAGAGAGAGAGAGAGCCTCC  50

seq1  AGTCTATCCTTTGAGGGATGGTAGACATAGAACTTACTGTTCATGAAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTATCCTTTGAGGGATGGTAGACATAGAACTTACTGTTCATGAAGTG  100

seq1  CAATGCCTGTTGGTGCTGTCAAGAAGCAGCTATTGATTAGTTAACTAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCCTGTTGGTGCTGTCAAGAAGCAGCTATTGATTAGTTAACTAGGG  150

seq1  AACATTAAACTAATCCTTAGTAATTAGGTCCATACATACAGTGATTATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTAAACTAATCCTTAGTAATTAGGTCCATACATACAGTGATTATAT  200

seq1  TTATAAAAAGTAAAGCAAATATTGTTACTTCTTTCAGTTACTGTCCAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAAAGTAAAGCAAATATTGTTACTTCTTTCAGTTACTGTCCAAAT  250

seq1  TGCTCAGGTAGTTTTAATTACTTTTTTAGGAGAAAAAAAAATCTGTATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAGGTAGTTTTAATTACTTTTTTAGGAGAAAAAAAAATCTGTATAT  300

seq1  GCTTTGTGCTTGAGGAATTTTAGTTAGATTGAGAATAGTTTTTGTCATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGTGCTTGAGGAATTTTAGTTAGATTGAGAATAGTTTTTGTCATTT  350

seq1  TGATTTTTTTTTTTCCTCACTAGTTTTCCTTAAAAACAACCGTGGTTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTTTTTTTTCCTCACTAGTTTTCCTTAAAAACAACCGTGGTTACT  400

seq1  CATTTACTCAACAGTGGCTTTACTCTTCACCTAAGTCATATGTAACTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTACTCAACAGTGGCTTTACTCTTCACCTAAGTCATATGTAACTGTT  450

seq1  GGACATCCAGAAGGGTATTGAGCACGGAGAGGGTTACTAAGATGCTAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATCCAGAAGGGTATTGAGCACGGAGAGGGTTACTAAGATGCTAGGA  500

seq1  TAACCATGCCACCCAAATAAATGGTCCTGTTAGCTGAAGTAAATGCAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCATGCCACCCAAATAAATGGTCCTGTTAGCTGAAGTAAATGCAGTC  550

seq1  AGAGAGTTAAACTGGAATTC  570
      ||||||||||||||||||||
seq2  AGAGAGTTAAACTGGAATTC  570

seq1: chr7_104031692_104032726
seq2: B6Ng01-126L12.g_67_1087

seq1  GAATTCAAGAGAGTTCAGAAGAGCAATTTCCCCTGCAAAGTCAGAATGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGAGAGTTCAGAAGAGCAATTTCCCCTGCAAAGTCAGAATGAG  50

seq1  AGACAGGAAGGAGTCAGGTCACACAGCCACCCTTCACTCACATTATTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGAAGGAGTCAGGTCACACAGCCACCCTTCACTCACATTATTAAG  100

seq1  CACTCCAAGTACTCGGCATTCAGCAGTGATCAGCAAATCCTGGCCTCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCAAGTACTCGGCATTCAGCAGTGATCAGCAAATCCTGGCCTCTGG  150

seq1  GGGCTGACATTCCACTGAGGAAAGACTCCTAGGACACTGAAGAGCCTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGACATTCCACTGAGGAAAGACTCCTAGGACACTGAAGAGCCTGGT  200

seq1  AGGAAGTTCAGATCCACTGGAAGTACATAATCCTTTTGGACCTCACTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTTCAGATCCACTGGAAGTACATAATCCTTTTGGACCTCACTTTA  250

seq1  TCTATGACATAGGCATTGGTGTTGCCACTCATGGAGTGGGGAGCATAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGACATAGGCATTGGTGTTGCCACTCATGGAGTGGGGAGCATAGCC  300

seq1  GCCAAGGCTGTACTATGGCGCCTGCGCATAACCACTGGCTGTGGTGAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGGCTGTACTATGGCGCCTGCGCATAACCACTGGCTGTGGTGAGGC  350

seq1  TTGTGGGTTAGGAGGAAACAGGCCTGAGATCTGTCCTCCAGGATCACCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGGTTAGGAGGAAACAGGCCTGAGATCTGTCCTCCAGGATCACCCC  400

seq1  TCTGTCAAAGGTAAAGATAAGATCCTCTAGCCTACACTGTGCCATCTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCAAAGGTAAAGATAAGATCCTCTAGCCTACACTGTGCCATCTCTT  450

seq1  CTGGTTTGGAAGAAAACATGGCCAGGGCTCTGAGAGTTTTTGTAGTGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTTGGAAGAAAACATGGCCAGGGCTCTGAGAGTTTTTGTAGTGCAA  500

seq1  AGCAGGACAGTCAAGCCAGAGTGGTGACACATCAGTCATCCCAGCACCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGACAGTCAAGCCAGAGTGGTGACACATCAGTCATCCCAGCACCTG  550

seq1  GGACGTAGCCGCAAGAGGATCCGCAGTTCTATGTTGTCCTTCGCTGCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACGTAGCCGCAAGAGGATCCGCAGTTCTATGTTGTCCTTCGCTGCACA  600

seq1  GCCAGCTCAAAGTCAGCATAGGCTACAGGAGACAAGGGGGAAAAAATCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCTCAAAGTCAGCATAGGCTACAGGAGACAAGGGGGAAAAAATCAA  650

seq1  ACCAAACCAACAAATAAAAAAGGCATGATAGTCAGAATCAAAGCAATGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAACCAACAAATAAAAAAGGCATGATAGTCAGAATCAAAGCAATGTC  700

seq1  CCAGCTTCACCCAAACAGCTGGGGCTCAGAAAACTCTCCTCCCTGATTCC  750
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CCAGCTTCACCC-AACAGCTGGGGCTCAGAAAACTCTCCTCCCTGATTCC  749

seq1  TAAATCCTGCTGCAGTAGCTCTCAGGCAGTAGCTCTCAGCAGGTCAACGC  800
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TAAATCCTGCTGCAGTAGCTCTCAGGCAGTAGCTCTCAGCAGTTCAACGC  799

seq1  CATGCAAAAGGGGTCCCGCAGAGGAGGCCCACAAGGCAGAGGTCTCAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAAAAGGGGTCCCGCAGAGGAGGCCCACAAGGCAGAGGTCTCAGGA  849

seq1  CCAAGAGGAGAAGGCTCCAGCTCTTCCAACTCAATGAGAAGGAGCAGCAC  900
      || ||||||||||||||||||| ||||||||||||||| ||||||| |||
seq2  CC-AGAGGAGAAGGCTCCAGCTTTTCCAACTCAATGAG-AGGAGCA-CAC  896

seq1  TCAGATGGGACAATCACATGTATCGATCAGGAGGCCGGGGAGCCCATCGG  950
      ||||||||||| ||||||||||||||||| |||||  ||||| ||||| |
seq2  TCAGATGGGAC-ATCACATGTATCGATCA-GAGGC--GGGAG-CCATC-G  940

seq1  CATCTCCCAAGCTCTGGGAGATACGGAAATTAATGACTAGGAGACAAACA  1000
      ||||||||||||||| ||||||||||||  | ||||||| ||||||||||
seq2  CATCTCCCAAGCTCT-GGAGATACGGAA--TTATGACTA-GAGACAAACA  986

seq1  TGTATACATTGGCAGCTGCATCTGATGTTCATTTA  1035
      |||||||||||||||||||||||||||||||||||
seq2  TGTATACATTGGCAGCTGCATCTGATGTTCATTTA  1021