BAC Information

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BAC

Clone NameB6Ng01-127E05
Chromosome7 (Build37)
Map Location 15,119,152 - 15,120,090
singlet/doubletsinglet
Overlap genenone
Upstream gene9230107M04Rik, EG666256, LOC666267, LOC100042624, LOC100043194, Sult2a1, EG620627, EG434121, EG629203, LOC677512, EG629219, EG434123, 2810007J24Rik, EG638251
Downstream geneB430211C08Rik, EG194588, LOC666352, EG666312, LOC666365, LOC671978, LOC100042677, LOC100042685, EG666381, LOC100042691, LOC100042702, LOC100042707, LOC100042711, LOC100042714, LOC100042717, LOC100042721, LOC100042728, LOC100042731, LOC100042735, LOC100042739, LOC100042742, LOC235841, EG666407, LOC666337, Obox2, LOC100042753, LOC100042756, LOC100042758, EG545921, LOC100042762
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127E05.bB6Ng01-127E05.g
ACCDH929424DH929425
length898927
definitionDH929424|Mus musculus domesticus DNA, BAC clone: B6Ng01-127E05, 5' end.DH929425|Mus musculus domesticus DNA, BAC clone: B6Ng01-127E05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccattcctaaacataatagaagcaatttactgcaaatca
acaaccaatataaaattaaatggagagatacttgaaagcaattccactaa
aatcaggaaaaagacaaggatgcacacactctgaatatgtatgtattcaa
tatagtactcaaagttctagctagaacaataagacaaccaaaatggatca
agagggtacaaaattggcaaagaggaattaaaagtaccactctttgcaga
aggtgcggcagtatacatgagtgacccttataataataccagagaacctg
tatggctgataaacttaattaaagtgactggataagaaattacctgaaat
aaatctttagccttccattatgccaatgataaacaggctgagaaagaaat
tagggaatcaacacccttcacactagccacaaataatataaaatatcttg
gagtaagtaactaaacaagtgaaagatctgtatgacaatagcttcaagtc
tctcaagaaagaaattgaagaagatctcagaaaatggagacatctcccat
gctcatggattggaagaattaacatagtaaaaatggccatcctaccaaaa
gcattctgtaaattcaattcaatccccatcaaaatcccaacaaaatctac
aaatacatggacaggaaaattctcaaattcatttggaaaagaaaataaaa
cctaagaatagtgaaaacaattcttaaaaataaaagaacttctaggggaa
tcatcatccctgacctcaagctatactacagagcaatagtgataaaaact
gcatggtattggtttatgaattctcagtttagttctaaacctatttttga
ttgggttatcaggtttttccgggggtagcttcttgagttctttaagtt
gaattctccatacaggttaaatgaggatgtttttgtagatagacagatgg
ggtccaaaaactataaagactgcagagtcagtagtatgaccttatgtttg
cctttttttttaactgtattgttttttatatgtctggaagatactgactt
tgtaaccacagtactgctgcccctgacctcactggagagtggtggttggg
agatataaaaaaattgtgcttgctgtaaaatttttatgtctctgattgta
tagttcctttttctgttctaaatctgtacttctctgtgtcacaagaaaat
gttggcacaggaaaatagagaagcattttcctatctcccctatgaatttt
gtaaaccaatttccttgtatgatttcaataaaagactggggttgagtcaa
gtctaggagagcaccgggcctcctgagttcaagggctcacatgtcaagaa
aacagcctgtcagtattatatctcaattgtgttttttcttatttgtcgat
gaggtatccctagtccttgatgatccccgactcttgtgtccagaggcttg
gcccagacaccagtgtccctgggctgatagtcatgtattaacacaagagc
ttttttgtatatttactctatggtagagtagtgttagtgctttgaaagcc
aaactggagataaaagatgaagatgcttagtagtccctgcacataggaag
cctgcaacaactgctgggaagacttcatgtgtaaggcatagatagtggag
ggttactggtgggtctgttcactcttaccatgtatttctgtttgagtata
tccttacatcttcatgctttccagtactggtgctttgccaataaactgtc
ctaccccaaaactttgtttttaatgatcattgccccatttcctgcacgtt
aaaaatgttttcatgcatatataaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_15119152_15120090
seq2: B6Ng01-127E05.g_70_996

seq1  GAATTCTCCATACAGGTTAAATGAGGATGTTTTTGTAGATAGACAGATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATACAGGTTAAATGAGGATGTTTTTGTAGATAGACAGATGG  50

seq1  GGTCCAAAAACTATAAAGACTGCAGAGTCAGTAGTATGACCTTATGTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCAAAAACTATAAAGACTGCAGAGTCAGTAGTATGACCTTATGTTTG  100

seq1  CCTTTTTTTTTAACTGTATTGTTTTTTATATGTCTGGAAGATACTGACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTTTTTAACTGTATTGTTTTTTATATGTCTGGAAGATACTGACTT  150

seq1  TGTAACCACAGTACTGCTGCCCCTGACCTCACTGGAGAGTGGTGGTTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACCACAGTACTGCTGCCCCTGACCTCACTGGAGAGTGGTGGTTGGG  200

seq1  AGATATAAAAAAATTGTGCTTGCTGTAAAATTTTTATGTCTCTGATTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATAAAAAAATTGTGCTTGCTGTAAAATTTTTATGTCTCTGATTGTA  250

seq1  TAGTTCCTTTTTCTGTTCTAAATCTGTACTTCTCTGTGTCACAAGAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCCTTTTTCTGTTCTAAATCTGTACTTCTCTGTGTCACAAGAAAAT  300

seq1  GTTGGCACAGGAAAATAGAGAAGCATTTTCCTATCTCCCCTATGAATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCACAGGAAAATAGAGAAGCATTTTCCTATCTCCCCTATGAATTTT  350

seq1  GTAAACCAATTTCCTTGTATGATTTCAATAAAAGACTGGGGTTGAGTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACCAATTTCCTTGTATGATTTCAATAAAAGACTGGGGTTGAGTCAA  400

seq1  GTCTAGGAGAGCACCGGGCCTCCTGAGTTCAAGGGCTCACATGTCAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGGAGAGCACCGGGCCTCCTGAGTTCAAGGGCTCACATGTCAAGAA  450

seq1  AACAGCCTGTCAGTATTATATCTCAATTGTGTTTTTTCTTATTTGTCGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCCTGTCAGTATTATATCTCAATTGTGTTTTTTCTTATTTGTCGAT  500

seq1  GAGGTATCCCTAGTCCTTGATGATCCCCGACTCTTGTGTCCAGAGGCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTATCCCTAGTCCTTGATGATCCCCGACTCTTGTGTCCAGAGGCTTG  550

seq1  GCCCAGACACCAGTGTCCCTGGGCTGATAGTCATGTATTAACACAAGAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGACACCAGTGTCCCTGGGCTGATAGTCATGTATTAACACAAGAGC  600

seq1  -TTTTTGTATATTTACTCTATGGTAGAGTAGTGTTAGTGCTTTGAAAGCC  649
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTATATTTACTCTATGGTAGAGTAGTGTTAGTGCTTTGAAAGCC  650

seq1  AAACTGGAGATAAAAGATGAAGATGCTTAGTAGTCCCTGCACAATAGGAA  699
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AAACTGGAGATAAAAGATGAAGATGCTTAGTAGTCCCTGCAC-ATAGGAA  699

seq1  GCCTGCAACAACTGCTGGGAAGACTTCATGTGTAAGGCATAGATAGTGGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCAACAACTGCTGGGAAGACTTCATGTGTAAGGCATAGATAGTGGA  749

seq1  GGGTTACT-GTGGGTCTGTTTCACTCTTACCATGTATTTCTGTTTGAGTA  798
      |||||||| ||||||||| |||||||||||||||||||||||||||||||
seq2  GGGTTACTGGTGGGTCTG-TTCACTCTTACCATGTATTTCTGTTTGAGTA  798

seq1  TATCCTTACAATCTTCCATGCTTTCCAGTTACTGGTGCTTTGCCAATAGA  848
      ||||||||| ||||| |||||||||||| ||||||||||||||||||| |
seq2  TATCCTTAC-ATCTT-CATGCTTTCCAG-TACTGGTGCTTTGCCAATA-A  844

seq1  TCTGTCCTACCCCAGAAACTTTGTTTTTAAATGATACAGTGCCCCCATTT  898
       ||||||||||||| ||||||||||||| |||||| || || ||||||||
seq2  ACTGTCCTACCCCA-AAACTTTGTTTTT-AATGAT-CATTG-CCCCATTT  890

seq1  CCTTGCACGTTAGAAAATGTTTTCATATGCATATATAAAAA  939
      || ||||||||| |||||||||||  |||||||||||||||
seq2  CC-TGCACGTTA-AAAATGTTTTC--ATGCATATATAAAAA  927