BAC Information

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BAC

Clone NameB6Ng01-127E07
Chromosome7 (Build37)
Map Location 67,012,773 - 67,014,540
singlet/doubletdoublet
Overlap geneLOC664788
Upstream geneAtp10a, LOC621446, LOC668811, LOC668813, LOC668815, EG668818, Ube3a, LOC100040985, LOC100041010, LOC100041029, LOC100041051, Pwcr1
Downstream geneSnrpn, Snurf, EG664849, LOC100041201, LOC100041211, LOC664896
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127E07.bB6Ng01-127E07.g
ACCDH929428DH929429
length1,187146
definitionDH929428|Mus musculus domesticus DNA, BAC clone: B6Ng01-127E07, 5' end.DH929429|Mus musculus domesticus DNA, BAC clone: B6Ng01-127E07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,013,324 - 67,014,540)(67,012,773 - 67,012,897)
sequence
gaattctaggtgcccaggtcttggtggagcagggaacggctgccattgat
tatgtccaggcccttcgggacatggagcatgcctagggcctctggtttct
cccatgtttggagcttcggcccattgttccctggcagtggattgtcagtg
tccagcagtccattgctctccccaaagccagagcaatccagagtactgga
accacttgatgcaatgcactccaacgagcttggatctatgatgattccca
gtcaaacattccttggaaaagctgaacaaaatgagtgaaaactctgtacc
gccactctcatcggaactgaggtccagcatcttgggtctcccaggtgcta
tgggcgtcaggcacaggctgcccaaacactccattgttcttgacttcttc
gggctctagccagactctccagagacaggtgtgtgcttggcctactctgc
caaaaatccatggtgtaggacacagcaggtccttaagcactggtggttag
ctccctttgctgtagaggagatgcttggcagatactcagtaggtagtcct
gctaggtccaaggagagggccccagccattgtggaaagtagactgtgagg
caaaagtagcagtggcagtggcaccaaatcttggcttttcacatgggaat
atcaagcagtggaggcaggcttctcagaagcacttatatgaattttaacc
ctgttgcattgctttacgtagtcaatagaatgcaggctgctggtagagtg
tagcttgacccagtagcatgtaaacgggactgtgtgactgttgtcggttc
acgtggtgaacagaaggctctgtgtccctggcagcttggaagtttcccgg
gcgattggctaggaaatagagaaggagctaagccttggagtgatggcagg
cacctcacgggtcagtttgcaccacattacacactaacctgtgtctgtag
acgatgaaactttgatggactcgctggagcatgagacttgcagacctgtg
tctctaaagatttgttgaatactttggtagatctctctttgtaggtgctg
tgcttgatgttgttgagggatatccttgtatatttgaactgttgtcagct
tccttgcaggtcaaggaaagtctagacagttcttgcaccccagctaagag
aacacatctggtaggaactctaaattaagaccaaggt
gggaagcaggcttcattttcacagctgaaaggaacccccctctctctccc
tctctctgtgttagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgacacacagccatgttggtgggtgtgtgtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_67013324_67014540
seq2: B6Ng01-127E07.b_50_1236 (reverse)

seq1  ACCTTGGTCTCTAATTTAGAGGGTCCCTCACCAAGATG-GTTCTCCTAAG  49
      |||||||||| |||||||||  || ||| ||| ||||| |||||| ||  
seq2  ACCTTGGTCT-TAATTTAGA--GTTCCT-ACC-AGATGTGTTCTCTTA--  43

seq1  GCTGTGGGTGCAAGAACTGTTCCTAGACTTTCCCTTTGACCTTGCCAAGG  99
      |||| |||||||||||||||  |||||||||||  |||||||   |||||
seq2  GCTG-GGGTGCAAGAACTGT--CTAGACTTTCC--TTGACCT--GCAAGG  86

seq1  AGGCTGACAACAAGGTCCAAATATACCAAGGATATCCCTTCAACAACATC  149
      | ||||||||||  || |||||||| |||||||||||| |||||||||||
seq2  AAGCTGACAACA--GTTCAAATATA-CAAGGATATCCC-TCAACAACATC  132

seq1  CAAAGCAACAGCACCTACCAAAGAGGAGATTCCTACCAAAGTTATTTTAA  199
        |||| |||||||||| |||||| |||||  ||||||||||   || ||
seq2  --AAGC-ACAGCACCTA-CAAAGA-GAGAT--CTACCAAAGT--ATTCAA  173

seq1  CAAATCTATCGAGACACAGGTCTGCAAGTCTCATGCTGCCAACGAGTCCA  249
      ||||||| | ||||||||||||||||||||||||||| ||| ||||||||
seq2  CAAATCTTTAGAGACACAGGTCTGCAAGTCTCATGCT-CCAGCGAGTCCA  222

seq1  TCAAAGTTTCATTCGTCTACAGACACAGGTAAGTGTGTAAATGTGGTGCA  299
      ||||||||||| |||||||||||||||||| ||||||| |||||||||||
seq2  TCAAAGTTTCA-TCGTCTACAGACACAGGTTAGTGTGT-AATGTGGTGCA  270

seq1  AACTGACCCGTGAGGTGCCTGCCATCACCTCCAAGGCTTAGCTCCTTCTC  349
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AACTGACCCGTGAGGTGCCTGCCATCA-CTCCAAGGCTTAGCTCCTTCTC  319

seq1  TATTTCCTAGCCAATCGCCCGGGAAACTTCCAAGCTGCCAGGGACACAGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCTAGCCAATCGCCCGGGAAACTTCCAAGCTGCCAGGGACACAGA  369

seq1  GCCTTCTGTTCACCACCTGAACCGACAACAGTCACACAGTCCCGTTTACA  449
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GCCTTCTGTTCACCACGTGAACCGACAACAGTCACACAGTCCCGTTTACA  419

seq1  TGCTACTGGGTCAAGCTACACTCTACCAGCAGCCTGCATTCTATTGACTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACTGGGTCAAGCTACACTCTACCAGCAGCCTGCATTCTATTGACTA  469

seq1  CGTAATGCAATGCAACAGGGTTAAAATTCATATAAGTGCTTCTGAGAAGC  549
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAAAGCAATGCAACAGGGTTAAAATTCATATAAGTGCTTCTGAGAAGC  519

seq1  CTGTCTCCACTGCTTGATATTCCCATGTGAATAGCCAAGATTTGGTGCCA  599
      ||| ||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTGCCTCCACTGCTTGATATTCCCATGTGAAAAGCCAAGATTTGGTGCCA  569

seq1  CTGCCACTGCTACTTTTGCCTCACAATCTACTTTCCACAATGGCTGGGGC  649
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CTGCCACTGCTACTTTTGCCTCACAGTCTACTTTCCACAATGGCTGGGGC  619

seq1  CCTCTCCTTGGACCTAGCACGACTACCTACTGAGTATCTGCCAAGCATCT  699
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CCTCTCCTTGGACCTAGCAGGACTACCTACTGAGTATCTGCCAAGCATCT  669

seq1  CCACTACAGCAAAGGGAGCAAGCCACCAGTGCTTAAGGACCTGCTGTGTC  749
      || |||||||||||||||| | ||||||||||||||||||||||||||||
seq2  CCTCTACAGCAAAGGGAGCTAACCACCAGTGCTTAAGGACCTGCTGTGTC  719

seq1  CTACACCATGAATTTTTGGCAGAGTAGGCCAAGCACACACCTGTCTCTGG  799
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTACACCATGGATTTTTGGCAGAGTAGGCCAAGCACACACCTGTCTCTGG  769

seq1  AGAGTCTGGCTAGAGCCCGAAGAAGTCAAGAACAATGGAGTGGTTGGGCA  849
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGAGTCTGGCTAGAGCCCGAAGAAGTCAAGAACAATGGAGTGTTTGGGCA  819

seq1  GCCTGTGCCTGACGCCCATAGCACCTGGGAGACCCAAGATGCTGGACCTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTGCCTGACGCCCATAGCACCTGGGAGACCCAAGATGCTGGACCTC  869

seq1  AGTTCCGATGAGAGTGGCGGTACAGAGTTTTCACTCATTTTGTTCAGCTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCGATGAGAGTGGCGGTACAGAGTTTTCACTCATTTTGTTCAGCTT  919

seq1  TTCCAAGGAATGTTTGACTGGGAATCATCATAGATCCAAGCTCGTTGGAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAGGAATGTTTGACTGGGAATCATCATAGATCCAAGCTCGTTGGAG  969

seq1  TGCATTGCATCAAGTGGTTCCAGTACTCTGGAGTGCTCTGGCTTTGGGGA  1049
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGCATTGCATCAAGTGGTTCCAGTACTCTGGATTGCTCTGGCTTTGGGGA  1019

seq1  GAGCAATGGACTGCTGGACACTGACAATCCACTGCCAGGGAACAATGGGC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAATGGACTGCTGGACACTGACAATCCACTGCCAGGGAACAATGGGC  1069

seq1  CAAAGCTCAAAACATGGGAGAAACCAGAGGCCCTAGGCATGCTCCATGTC  1149
      | |||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGCTCCAAACATGGGAGAAACCAGAGGCCCTAGGCATGCTCCATGTC  1119

seq1  CCGAAGGGCCTGGACATAATCAATGGCAGCTGTTCCCTGCTCCACCAAGA  1199
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CCGAAGGGCCTGGACATAATCAATGGCAGCCGTTCCCTGCTCCACCAAGA  1169

seq1  CCTGGGCACCTAGAATTC  1217
      ||||||||||||||||||
seq2  CCTGGGCACCTAGAATTC  1187

seq1: chr7_67012773_67012897
seq2: B6Ng01-127E07.g_83_228

seq1  GGGAAGCAGGCTTCATTTTCACAGCTGAAAGGAACCCCCCTCTCTCTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGCAGGCTTCATTTTCACAGCTGAAAGGAACCCCCCTCTCTCTCCC  50

seq1  TCTCTCTGTGTTAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  100
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTGTGTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  100

seq1  TGTGTGTGTGTGTGT---------------------GTGTGTGTCT  125
      |||||||||||||||                     ||||||||||
seq2  TGTGTGTGTGTGTGTGACACACAGCCATGTTGGTGGGTGTGTGTCT  146