BAC Information

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BAC

Clone NameB6Ng01-127F21
Chromosome7 (Build37)
Map Location 86,394,035 - 86,536,189
singlet/doubletdoublet
Overlap geneAbhd2, Rlbp1
Upstream geneNtrk3, Mrpl46, Mrps11, Det1, Isg20l1, Isg20, Acan, Hapln3, Mfge8
Downstream geneBC025462, Polg, AI854517, Rhcg, 5730590G19Rik, Plin, Pex11a, EG626359, EG665900, Mesp1, Mesp2, Anpep, Ap3s2, 2610034B18Rik, Zfp710, Idh2, Sema4b, Cib1, D330012F22Rik, LOC100042374, LOC100042379, Ttll13, Ngrn, Vps33b, Prc1, Rccd1, Unc45a, Hddc3, Man2a2, Fes, Furin
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127F21.bB6Ng01-127F21.g
ACCDH929502DH929503
length545742
definitionDH929502|Mus musculus domesticus DNA, BAC clone: B6Ng01-127F21, 5' end.DH929503|Mus musculus domesticus DNA, BAC clone: B6Ng01-127F21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,535,639 - 86,536,189)(86,394,035 - 86,394,773)
sequence
aatttgtagatcagactggcctcgaactcagaaatccacctgccactgcc
tcccaatggtgggtttaaaggcatgtgccaccattgcctggctacctgtt
tttttattaacattaacttttttttgttgttgttgttttttttttttttt
ggttttttgagacagggtttctctgtatagctctggttgtcctggaactc
actttggataccaagatggcctcgaactcaaaaatcctcctgcctctgcc
tccccagtgctgggattaaaggcgtgcgccaccacgcccggtaacattaa
ctttttgcttatgttttcttgttgaagatcccacttgacccaggctgggt
tttaacttgcgacataactgtgattggccttgatgtgttttgtaaagtca
acaatatgttttaaagagcgaggtacggtgcaatgggttagggtacctcg
atgggcccacgctaaggcatccttccctgcaaggtaccagccataggtct
agtatagcatagagtttattctgttgaaggggggttgagaaggga
gaattccagcactttgaaggtgaacgtggatcaagagttcagctatatag
tgagttcaaggccagcctggattacaaaaaaaaaaactgtattgtaagca
aacctgctttccctgtccctatcttaggtcagctggtgccctcaagcacc
agcatccttcatgagctctgcacacctgcctatgccttgccaattagctc
tcaactcaattaggcattcacacagtcttttccataccataaaggaccta
ggttcagatagcagcttcttactgaagagcttgtctcgacaggcacagtg
gtgtgtgcctttcatcctagcaacgggggagatcagaccaggcagatctc
tgtgaatttggggccagtcttgtcttcacagtgagttctaggccctcagg
gttacatagtgagactgtctcaaaagaaaaggaagaaagaatggtcttcc
atctactccctttgagccacccaaagccctttctgaaccctaactcccca
atacaaaaggcttgtgcaacattgcctgtacagtagggagaacagggggt
gtcagaaagcagatggcaagtcactctctacaccagcaggcataggcttc
tcacaccatgaccaagacagagtagctggggtttccggaagacacctcag
tgggtgtgaaagccttgtggttaatcagggcccacagttgagtctctcaa
tccagtgttttcctctagggtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_86535639_86536189
seq2: B6Ng01-127F21.b_49_599 (reverse)

seq1  TCCCTTCTCAACCCCCCTTCAACAGAATAAACTCTATGCTATACTAGACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCTCAACCCCCCTTCAACAGAATAAACTCTATGCTATACTAGACC  50

seq1  TATGGCTGGTACCTTGCAGGGAAGGATGCCTTAGCGTGGGCCCACTGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||  ||||
seq2  TATGGCTGGTACCTTGCAGGGAAGGATGCCTTAGCGTGGGCCCATCGAGG  100

seq1  TACCCTAACCCACTGCACCGTACCTCGCTCTTTAAAACATATTGTTGACT  150
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TACCCTAACCCATTGCACCGTACCTCGCTCTTTAAAACATATTGTTGACT  150

seq1  TTACAAAACACATCAAGGCCAATCACAGTTATGTCGCAAGTTAAAACCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAAACACATCAAGGCCAATCACAGTTATGTCGCAAGTTAAAACCCA  200

seq1  GCCTGGGCTAAGTGGGATCCTGACTAAGAAAACATAAGCAAAAAGTTAAT  250
      |||||||  |||||||||| | |  |||||||||||||||||||||||||
seq2  GCCTGGGTCAAGTGGGATCTTCAACAAGAAAACATAAGCAAAAAGTTAAT  250

seq1  GTTGCCGGGCGTGGTGGCGCACGCCTTTAATCCCAGCACTCGGGAGGCAG  300
      ||| |||||||||||||||||||||||||||||||||||| |||||||||
seq2  GTTACCGGGCGTGGTGGCGCACGCCTTTAATCCCAGCACTGGGGAGGCAG  300

seq1  AGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTT  350
      ||||||| |||||| |||||||||||||| | |||| | |||||||||||
seq2  AGGCAGGAGGATTTTTGAGTTCGAGGCCATCTTGGTATCCAAAGTGAGTT  350

seq1  CCAGGACAACCAGAGCTATACAGAGAAACCCTGTCTCAAAAAACCAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACAACCAGAGCTATACAGAGAAACCCTGTCTCAAAAAACCAAAAA  400

seq1  AAAAAAAAAACAACAACAACAAAAAAAAGTTAATGTTAATAAAAAAACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAACAACAACAACAAAAAAAAGTTAATGTTAATAAAAAAACAG  450

seq1  GTAGCCAGGCAATGGTGGCACATGCCTTTAAACCCACCATTGGGAGGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCAGGCAATGGTGGCACATGCCTTTAAACCCACCATTGGGAGGCAG  500

seq1  TGGCAGGTGGATTTCTGAGTTCGAGGCCAGTCTGATCTACAAATTGAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGGTGGATTTCTGAGTTCGAGGCCAGTCTGATCTACAAATTGAATT  550

seq1  C  551
      |
seq2  C  551

seq1: chr7_86394035_86394773
seq2: B6Ng01-127F21.g_68_809

seq1  GAATTCCAGCACTTTGAAGGTGAACGTGGATCAAGAGTTCAGCTATATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCACTTTGAAGGTGAACGTGGATCAAGAGTTCAGCTATATAG  50

seq1  TGAGTTCAAGGCCAGCCTGGATTACAAAAAAAAAAACTGTATTGTAAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCAAGGCCAGCCTGGATTACAAAAAAAAAAACTGTATTGTAAGCA  100

seq1  AACCTGCTTTCCCTGTCCCTATCTTAGGTCAGCTGGTGCCCTCAAGCACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGCTTTCCCTGTCCCTATCTTAGGTCAGCTGGTGCCCTCAAGCACC  150

seq1  AGCATCCTTCATGAGCTCTGCACACCTGCCTATGCCTTGCCAATTAGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCCTTCATGAGCTCTGCACACCTGCCTATGCCTTGCCAATTAGCTC  200

seq1  TCAACTCAATTAGGCATTCACACAGTCTTTTCCATACCATAAAGGACCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTCAATTAGGCATTCACACAGTCTTTTCCATACCATAAAGGACCTA  250

seq1  GGTTCAGATAGCAGCTTCTTACTGAAGAGCTTGTCTCGACAGGCACAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCAGATAGCAGCTTCTTACTGAAGAGCTTGTCTCGACAGGCACAGTG  300

seq1  GTGTGTGCCTTTCATCCTAGCAACGGGGGAGATCAGACCAGGCAGATCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGCCTTTCATCCTAGCAACGGGGGAGATCAGACCAGGCAGATCTC  350

seq1  TGTGAATTTGGGGCCAGTCTTGTCTTCACAGTGAGTTCTAGGCCCTCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATTTGGGGCCAGTCTTGTCTTCACAGTGAGTTCTAGGCCCTCAGG  400

seq1  GTTACATAGTGAGACTGTCTCAAAAGAAAAGGAAGAAAGAATGGTCTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACATAGTGAGACTGTCTCAAAAGAAAAGGAAGAAAGAATGGTCTTCC  450

seq1  ATCTACTCCCTTTGAGCCACCCAAAGCCCTTTCTGAACCCTAACTCCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTCCCTTTGAGCCACCCAAAGCCCTTTCTGAACCCTAACTCCCCA  500

seq1  ATACAAAAGGCTTGTGCAACATTGCCTGTACAGTAGGGAGAACA-GGGGT  549
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATACAAAAGGCTTGTGCAACATTGCCTGTACAGTAGGGAGAACAGGGGGT  550

seq1  GTCAGAAAGCAGATGGCAAGTCACTCTCTACACCAGCAGGCATAGGCTTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAAAGCAGATGGCAAGTCACTCTCTACACCAGCAGGCATAGGCTTC  600

seq1  TCACACCATGACCAAGACAGAGTAGCT-GGGTTTCCGGAAGACACCTCAG  648
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TCACACCATGACCAAGACAGAGTAGCTGGGGTTTCCGGAAGACACCTCAG  650

seq1  TGGGTGTGAAAGCCTTGTGGTTAATCAGGGCCCACAGTTGAGTCTCTCAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGTGAAAGCCTTGTGGTTAATCAGGGCCCACAGTTGAGTCTCTCAA  700

seq1  TCCAGTGTTTT-CTCTAGGGTGTGTGTGTGTGTGTGTGTGTG  739
      ||||||||||| ||||||||||||||||||||||||||||||
seq2  TCCAGTGTTTTCCTCTAGGGTGTGTGTGTGTGTGTGTGTGTG  742