BAC Information

Click to search

BAC

Clone NameB6Ng01-127G10
Chromosome7 (Build37)
Map Location 25,369,474 - 25,562,003
singlet/doubletdoublet
Overlap geneZfp575, Ethe1, LOC100043138, EG232970, Lypd3, LOC100043706, Tex101, Gm1096, BC049730, EG210155, Cd177
Upstream geneEG546944, V1rd7, V1rd9, EG545934, V1rd22, LOC384573, EG622222, LOC546943, V1rd12, V1rd13, V1rd17, LOC100043121, V1rd16, LOC384575, V1rd20, V1rd18, V1rd15, EG622446, Zfp180, Zfp112, Zfp235, Zfp114, Zfp111, Zfp109, Zfp108, Zfp93, LOC100043690, Zfp61, LOC100043691, Zfp94, 1700008P20Rik, Lypd5, Kcnn4, 1500002O20Rik, Irgc1, Plaur, Cadm4, Zfp428, Irgq, 2310033E01Rik, Xrcc1
Downstream geneCeacam10, EG545936, LOC100043712, Lypd4, Dmrtc2, Rps19, Cd79a, Arhgef1, EG232974, Rabac1, Atp1a3, Grik5, Zfp574, Pou2f2, Dedd2, Zfp526, Gsk3a, 9130221H12Rik, Erf, Cic, Pafah1b3, EG623131, Tmem145, Megf8, Cnfn, Lipe, BC024561, LOC434148, Ceacam1, Ceacam2, LOC100043722, EG632778, 2310004L02Rik, B3gnt8, Bckdha, Exosc5, A830041P22Rik, BC028440, Tgfb1, Ccdc97, Hnrpul1, Axl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127G10.bB6Ng01-127G10.g
ACCDH929528DH929529
length1,031857
definitionDH929528|Mus musculus domesticus DNA, BAC clone: B6Ng01-127G10, 5' end.DH929529|Mus musculus domesticus DNA, BAC clone: B6Ng01-127G10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,369,474 - 25,370,500)(25,561,147 - 25,562,003)
sequence
gaattccaaagctacgtagtgcaatcctctcttttaaaaaagaaaagata
aacagacagccaaaggggggaaaaggtgtatttattgggacttaacagat
ggctctgtgattaagagcacttgttgcttagcagagggactgggttcttg
tcctaggacccacacagaggctcacaactattcctaatattccaggggat
ctgagcccctcacacctacaggcaccaggcacaaatgtgcatatacataa
tgcagagaaaacactcaggtacacataaatagaagaaggaggaaagaaaa
aaaatccaaaagcgtgtgtgcttgcctgtgtaatgcttgtgtagcagtca
caaagacctcagaaccctgagagtcccagggtagactggagacgggagac
ctcatcacaaaacaaacatcccacaaacccaaagtgctttcagacagtgt
gcctcaggtccccaagagattcagaggcactgcagccttgagctctccag
tagatgtgcccttggttctgcctctgtcacctcctgtggccacctcctgt
gctcacagctccgtgtacgcacaatgctggcctctttcctaaggccacac
attccccctctgttcactggcctctggccgtggacatgtgatggcctgta
cccagtgtggccacaccgcagtgaacatccctgatgcctttatcacaggc
ttgagtgttcagggccagtgtcaccacaacccgcacaactccaggcccgc
ccaaggtttgagcccagcaccaatctgatgacatctgcctctgtgcatgg
ggatagaatccctcaaccttctaattcagattcctgcagaaccaataatc
caaatccaccctgggtacataatctagaccaccaggctttgggaaggcta
cccagaaaagttccaggtcagcttgggctaacctgtttcaagaccctgcc
atctccctggtagagggaagtccccacatacaccaggctttataatttcc
aggtcttattgacatgtgaatggaggcagag
gaattcctgtactttctatagcctagagtgacacaaacccccatgggagc
cctgtgtgccctgctctcaatgctcacagaggtggggtttactccaggca
ggaagtggcagagttatctggagggttgggaaaggcctagctgagtgatg
actgggtaggacctgatccatcgtcactgatggcaccagtcatgtgtctg
atcctaggatacaagttgtctcaggggcttcatatcctgggtgtgcagga
ggacgtgacctgtgtgtcctggaaagaggactgtgtgctccatcttccta
tggagggcgccagggagacctccccatcttcctgtgctggccaaatgtga
ttcaggtctgcccgtgccctccgtaaccttcccaggatggctctgttctc
cttggtgaatgccctgggatttcccatctctcccatggatgatggaggat
ggaagggaccacattggttgttcttgcagaatggagttctcagagataca
ggaaagagccaggaggacagagtatggttaggtgaaggaactggctccag
gtgtgtcagaactgggatggaaaccaggctgcaagacatgttcatccctc
aggagtttttctgttgagtatatggttcagtggctcccctggtgttcacg
aggagatctgcagctcacatctgggctgccctaaggttggtaaccaggct
ccagctccatgatggagctaagcaagaaaggctccagatgtggagatcct
ttgaggatccattcagcttttgctagagactatttatagtcatgaagtga
gactggctgcctttttgatctgcagttccacggtgactaatgaggtgaat
cccccgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_25369474_25370500
seq2: B6Ng01-127G10.b_33_1063

seq1  GAATTCCAAAGCTACGTAGTGCAATCCTCTCTTTTAAAAAAGAAAAGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGCTACGTAGTGCAATCCTCTCTTTTAAAAAAGAAAAGATA  50

seq1  AACAGACAGCCAAAGGGGGGAAAAGGTGTATTTATTGGGACTTAACAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACAGCCAAAGGGGGGAAAAGGTGTATTTATTGGGACTTAACAGAT  100

seq1  GGCTCTGTGATTAAGAGCACTTGTTGCTTAGCAGAGGGACTGGGTTCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTGTGATTAAGAGCACTTGTTGCTTAGCAGAGGGACTGGGTTCTTG  150

seq1  TCCTAGGACCCACACAGAGGCTCACAACTATTCCTAATATTCCAGGGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGGACCCACACAGAGGCTCACAACTATTCCTAATATTCCAGGGGAT  200

seq1  CTGAGCCCCTCACACCTACAGGCACCAGGCACAAATGTGCATATACATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCCCCTCACACCTACAGGCACCAGGCACAAATGTGCATATACATAA  250

seq1  TGCAGAGAAAACACTCAGGTACACATAAATAGAAGAAGGAGGAAAGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGAAAACACTCAGGTACACATAAATAGAAGAAGGAGGAAAGAAAA  300

seq1  AAAATCCAAAAGCGTGTGTGCTTGCCTGTGTAATGCTTGTGTAGCAGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCAAAAGCGTGTGTGCTTGCCTGTGTAATGCTTGTGTAGCAGTCA  350

seq1  CAAAGACCTCAGAACCCTGAGAGTCCCAGGGTAGACTGGAGACGGGAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGACCTCAGAACCCTGAGAGTCCCAGGGTAGACTGGAGACGGGAGAC  400

seq1  CTCATCACAAAACAAACATCCCACAAACCCAAAGTGCTTTCAGACAGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCACAAAACAAACATCCCACAAACCCAAAGTGCTTTCAGACAGTGT  450

seq1  GCCTCAGGTCCCCAAGAGATTCAGAGGCACTGCAGCCTTGAGCTCTCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGGTCCCCAAGAGATTCAGAGGCACTGCAGCCTTGAGCTCTCCAG  500

seq1  TAGATGTGCCCTTGGTTCTGCCTCTGTCACCTCCTGTGGCCACCTCCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGTGCCCTTGGTTCTGCCTCTGTCACCTCCTGTGGCCACCTCCTGT  550

seq1  GCTCACAGCTCCGTGTACGCACAATGCTGGCCTCTTTCCTAAGGCCACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACAGCTCCGTGTACGCACAATGCTGGCCTCTTTCCTAAGGCCACAC  600

seq1  ATT-CCCCTCTGTTCACTGGCCTCTGGCCGTGGACATGTGATGGCCTGTA  649
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCCCTCTGTTCACTGGCCTCTGGCCGTGGACATGTGATGGCCTGTA  650

seq1  CCCAGTGTGGCCACACCGCAGTGAACATCCCTGATGCCTTTATCACAGGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGTGGCCACACCGCAGTGAACATCCCTGATGCCTTTATCACAGGC  700

seq1  TTGAGTGTTCAGGGCCAGTGTCACCACAACCCGCACAACTCCAGGCCCGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTGTTCAGGGCCAGTGTCACCACAACCCGCACAACTCCAGGCCCGC  750

seq1  CCAAGGTTTGAGCCCAGCACCAATCTGATGACACCTGCCTCTGTGCATGG  799
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CCAAGGTTTGAGCCCAGCACCAATCTGATGACATCTGCCTCTGTGCATGG  800

seq1  GGATAGAATCCCTCAACCTTCTAAATCAGATTCCTGCAGAACCAATAATC  849
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GGATAGAATCCCTCAACCTTCTAATTCAGATTCCTGCAGAACCAATAATC  850

seq1  CCAAACCACCCTGGGTACAT-ATCTAGACCACCAGGCTTT-GGAAGGCTA  897
      | || ||||||||||||||| ||||||||||||||||||| |||||||||
seq2  CAAATCCACCCTGGGTACATAATCTAGACCACCAGGCTTTGGGAAGGCTA  900

seq1  -CCAGAAAAGTTCCAGTCCAGCTTGGGCT-ACCTGTATCAAGACCCTGCC  945
       |||||||||||||||  ||||||||||| |||||| |||||||||||||
seq2  CCCAGAAAAGTTCCAGGTCAGCTTGGGCTAACCTGTTTCAAGACCCTGCC  950

seq1  ATTCTCCCTGTTAGAGGGAAGTCCACACATACAGCAGGGCTTAGAAATTC  995
      | |||||||| ||||||||||||| |||||||| ||||  ||| || |||
seq2  A-TCTCCCTGGTAGAGGGAAGTCCCCACATACACCAGGCTTTATAATTTC  999

seq1  CAGGTCTTTATTGACAGGTG-ATGGAGGCAGAG  1027
      |||||| ||||||||| ||| ||||||||||||
seq2  CAGGTC-TTATTGACATGTGAATGGAGGCAGAG  1031

seq1: chr7_25561147_25562003
seq2: B6Ng01-127G10.g_68_924 (reverse)

seq1  ACGGGGGATCAACCTCATTAGTCACCGTGGAACTGCAGATC-AAAAGGCA  49
      |||||||||  |||||||||||||||||||||||||||||| ||||||||
seq2  ACGGGGGATTCACCTCATTAGTCACCGTGGAACTGCAGATCAAAAAGGCA  50

seq1  GCCAGTCTCACTTCATGACTAT-AATAGTCTCTAGCAAAAAGCTGAATGG  98
      |||||||||||||||||||||| ||||||||||||| |||||||||||||
seq2  GCCAGTCTCACTTCATGACTATAAATAGTCTCTAGC-AAAAGCTGAATGG  99

seq1  ATCCTCAAAGGATCTCCACATCTGGAGCCTTTCTTGCTTAGCTCCATCAT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCAAAGGATCTCCACATCTGGAGCCTTTCTTGCTTAGCTCCATCAT  149

seq1  GGAGCTGGGAGCCTGGTTACCAACCTTAGGGCAGCCCAGATGTGAGCTGC  198
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCT-GGAGCCTGGTTACCAACCTTAGGGCAGCCCAGATGTGAGCTGC  198

seq1  AGATCTCCTCGTGAACACCAGGGGAGCCACTGAACCATATACTCAACAGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTCCTCGTGAACACCAGGGGAGCCACTGAACCATATACTCAACAGA  248

seq1  AAAACTCCTGAGGGATGAACATGTCTTGCAGCCTGGTTTCCATCCCAGTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCCTGAGGGATGAACATGTCTTGCAGCCTGGTTTCCATCCCAGTT  298

seq1  CTGACACACCTGGAGCCAGTTCCTTCACCTAACCATACTCTGTCCTCCTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACACACCTGGAGCCAGTTCCTTCACCTAACCATACTCTGTCCTCCTG  348

seq1  GCTCTTTCCTGTATCTCTGAGAACTCCATTCTGCAAGAACAACCAATGTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTTCCTGTATCTCTGAGAACTCCATTCTGCAAGAACAACCAATGTG  398

seq1  GTCCCTTCCATCCTCCATCATCCATGGGAGAGATGGGAAATCCCAGGGCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTTCCATCCTCCATCATCCATGGGAGAGATGGGAAATCCCAGGGCA  448

seq1  TTCACCAAGGAGAACAGAGCCATCCTGGGAAGGTTACGGAGGGCACGGGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCAAGGAGAACAGAGCCATCCTGGGAAGGTTACGGAGGGCACGGGC  498

seq1  AGACCTGAATCACATTTGGCCAGCACAGGAAGATGGGGAGGTCTCCCTGG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTGAATCACATTTGGCCAGCACAGGAAGATGGGGAGGTCTCCCTGG  548

seq1  CGCCCTCCATAGGAAGATGGAGCACACAGTCCTCTTTCCAGGACACACAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCTCCATAGGAAGATGGAGCACACAGTCCTCTTTCCAGGACACACAG  598

seq1  GTCACGTCCTCCTGCACACCCAGGATATGAAGCCCCTGAGACAACTTGTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACGTCCTCCTGCACACCCAGGATATGAAGCCCCTGAGACAACTTGTA  648

seq1  TCCTAGGATCAGACACATGACTGGTGCCATCAGTGACGATGGATCAGGTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGGATCAGACACATGACTGGTGCCATCAGTGACGATGGATCAGGTC  698

seq1  CTACCCAGTCATCACTCAGCTAGGCCTTTCCCAACCCTCCAGATAACTCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCAGTCATCACTCAGCTAGGCCTTTCCCAACCCTCCAGATAACTCT  748

seq1  GCCACTTCCTGCCTGGAGTAAACCCCACCTCTGTGAGCATTGAGAGCAGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTTCCTGCCTGGAGTAAACCCCACCTCTGTGAGCATTGAGAGCAGG  798

seq1  GCACACAGGGCTCCCATGGGGGTTTGTGTCACTCTAGGCTATAGAAAGTA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACAGGGCTCCCATGGGGGTTTGTGTCACTCTAGGCTATAGAAAGTA  848

seq1  CAGGAATTC  857
      |||||||||
seq2  CAGGAATTC  857