BAC Information

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BAC

Clone NameB6Ng01-127I16
Chromosome7 (Build37)
Map Location 146,981,183 - 147,131,027
singlet/doubletdoublet
Overlap geneGpr123, LOC244229, Kndc1, Utf1
Upstream geneMapk1ip1, Ppp2r2d, Bnip3, EG668784, LOC669185, 6330417G02Rik, Dpysl4, Stk32c, LOC100038956, Lrrc27, Pwwp2, Inpp5a, Nkx6-2, E030019B06Rik, 9330101J02Rik, LOC100043472, EG434253, EG664869
Downstream geneLOC100039095, 6430531B16Rik, Adam8, Tubgcp2, Zfp511, Msx3, Drd1ip, Prap1, 1810014F10Rik, Echs1, Paox, Mtg1, Sprn, Olfr522, Olfr523, Olfr524, E430002D04Rik, 5830411N06Rik, EG622335, Olfr525, Olfr527, GA_x5J8B7W72BC-152913-152037, Olfr60, GA_x5J8B7W72BC-125691-125311, Olfr530, LOC622973, Olfr531, Olfr532, Olfr533, Olfr534-ps1, Olfr535, Olfr536, Olfr537-ps1, Olfr1523-ps1, Olfr538, Olfr1553-ps1, Olfr46, Olfr61, Olfr53, Olfr539, GA_x5J8B7W3EKE-4574231-4574913, Olfr45, Olfr541, GA_x5J8B7W3EKE-4522784-4521912, Cyp2e1, Syce1, LOC100043529, BC066028, 1190003J15Rik, Scgb1c1, Odf3, Bet1l, Ric8, Sirt3, Psmd13, LOC100043546, Cox8b, Nlrp6, Athl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127I16.bB6Ng01-127I16.g
ACCDH929631DH929632
length1,144925
definitionDH929631|Mus musculus domesticus DNA, BAC clone: B6Ng01-127I16, 5' end.DH929632|Mus musculus domesticus DNA, BAC clone: B6Ng01-127I16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(146,981,183 - 146,982,335)(147,130,089 - 147,131,027)
sequence
gaattctgtgcacaccactcaagtgctgaataatgaatcagatcgtcctg
gtgtgattaattttttaaatgagctatttgcatctggtgattaatcacgg
ctgccccatttggacccctctgggactaggaaaactgtcttctcaatctg
cagcccaggcctcactccaaggactcaaggacacagacatccgtgtacac
agcccctgtccagactggccactggtttggttcttggaggagagagtggc
aaatatgggaacccgggaccccagaatcagaaagagcatcaccttccttc
ctcttagccaaggaaagagcagtaccacagatcctgtggacatccctggt
atggaggccatcttgttcctagggtcagctttgtcctggggacagtttac
tcttggggccatcttgaccctggaatagttgttgtgtttgtgaagagtgg
ccacaggatgagtcttctctggctaaaactctaatccactgcactctcct
ttactggggacaaaagttctaacaagggcccaggatatctgaggccaaca
atgggcagcagagcatcatggacctacagcggcctatgtcccaaggcctc
aaagcctaggcctgccaactccagaagtcagataactggggaaagcagca
tggaagtagccccacccactcggcagtaagttaacctatcccatgtcccc
accaaaagataatcctatgttcatattggggattagggttctccccaaac
gtgttcctcctcctctgacagaagtgcctaaagctgactaatgacatcaa
tagccccaatgctctgactgttctcaagaagcatcaaccgggaggtcttc
actctgccatcctgcgtccaggggctgacgtgctctccttcaaatgttgc
cataccttgagaccacatttgggttaagctgccccaggagcatacagagc
tggggtacatgggcactgtcaaggtttgcctaaggctcttgtgagttcag
gagcttgtgaaagttgggctcctgtcatcgttcactctagacaacaggca
gcactccttcacagaggaagcctcagcaggacttgtctgttggctttgat
gggctgaactttcttgagagctcaggatacgaaggcaatgtcgg
gaattcattcacattgattaagtagaaaacacaatctttattttggtaag
aacctaggtttgagatggggatggggacagtaacaggggtcggggtagac
tgggagtcgtttctggagaagaggactgataacaaagctttattggcgca
agtccccaaggatgccccgctcggaggctgcactgcccagaatgaacccc
accgccagagaaacggtttggtcgaaggaacctcgtagatgctccacgtg
ctggttcagggtcgacagctggtcgcgcagagggcccagaactgttgaga
tgtcgcccaagtgcgtcaaggtctgcagcaacgcggtattcaacgactgg
ggagcaacctgcggggaagaagcacggccctgggaaaggccaggaggctc
attcggggtctccacgtcgtggtcgggggttggcgtcggggaggattcga
aggtatggcccggctcaggaggcagagtgtcggtgctcgtaagaggagga
gagctggtaatgcggtgggcacctgcagacttcgtcgtggaagaactgaa
tctgagcgcaggggcaggttcgtcatttttccgcagccagcggcagctcg
gcctctacgagagaaacgcgcggaacgtacggaatcccaactcagggctc
cgcccctccccaggagacccagacccttcttgcccacatggctgctccta
ccttgctccaccggtgcagtgcgggtgctaacgccgagagggacgagcgg
ccgcggcgctggggacgtccagggccagtagagcgcggcgaaccctcggc
ggcccttcgtccccatagccccatgatttgcggattggtatcgaagggtc
cggacggctggcctggagtctcgagtttgtcttgatgactggaacgacgc
gctctaagccggctgcgccgaactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_146981183_146982335
seq2: B6Ng01-127I16.b_45_1188

seq1  GAATTCTGTGCACACCACTCAAGTGCTGAATAATGAATCAGATCGTCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGCACACCACTCAAGTGCTGAATAATGAATCAGATCGTCCTG  50

seq1  GTGTGATTAATTTTTTAAATGAGCTATTTGCATCTGGTGATTAATCACGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGATTAATTTTTTAAATGAGCTATTTGCATCTGGTGATTAATCACGG  100

seq1  CTGCCCCATTTGGACCCCTCTGGGACTAGGAAAACTGTCTTCTCAATCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCCATTTGGACCCCTCTGGGACTAGGAAAACTGTCTTCTCAATCTG  150

seq1  CAGCCCAGGCCTCACTCCAAGGACTCAAGGACACAGACATCCGTGTACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCAGGCCTCACTCCAAGGACTCAAGGACACAGACATCCGTGTACAC  200

seq1  AGCCCCTGTCCAGACTGGCCACTGGTTTGGTTCTTGGAGGAGAGAGTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCTGTCCAGACTGGCCACTGGTTTGGTTCTTGGAGGAGAGAGTGGC  250

seq1  AAATATGGGAACCCGGGACCCCAGAATCAGAAAGAGCATCACCTTCCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGGGAACCCGGGACCCCAGAATCAGAAAGAGCATCACCTTCCTTC  300

seq1  CTCTTAGCCAAGGAAAGAGCAGTACCACAGATCCTGTGGACATCCCTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAGCCAAGGAAAGAGCAGTACCACAGATCCTGTGGACATCCCTGGT  350

seq1  ATGGAGGCCATCTTGTTCCTAGGGTCAGCTTTGTCCTGGGGACAGTTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGCCATCTTGTTCCTAGGGTCAGCTTTGTCCTGGGGACAGTTTAC  400

seq1  TCTTGGGGCCATCTTGACCCTGGAATAGTTGTTGTGTTTGTGAAGAGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGGGCCATCTTGACCCTGGAATAGTTGTTGTGTTTGTGAAGAGTGG  450

seq1  CCACAGGATGAGTCTTCTCTGGCTAAAACTCTAATCCACTGCACTCTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGGATGAGTCTTCTCTGGCTAAAACTCTAATCCACTGCACTCTCCT  500

seq1  TTACTGGGGACAAAAGTTCTAACAAGGGCCCAGGATATCTGAGGCCAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGGGGACAAAAGTTCTAACAAGGGCCCAGGATATCTGAGGCCAACA  550

seq1  ATGGGCAGCAGAGCATCATGGACCTACAGCGGCCTATGTCCCAAGGCCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCAGCAGAGCATCATGGACCTACAGCGGCCTATGTCCCAAGGCCTC  600

seq1  AAAGCCTAGGCCTGCCAACTCCAGAAGTCAGATAACTGGGGAAAGCAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCTAGGCCTGCCAACTCCAGAAGTCAGATAACTGGGGAAAGCAGCA  650

seq1  TGGAAGTAGCCCCACCCACTCGGCAGTAAGTTAACCTATCCCATGTCCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGTAGCCCCACCCACTCGGCAGTAAGTTAACCTATCCCATGTCCCC  700

seq1  ACCAAAAGATAATCCTATGTTCATATTGGGGATTAGGGTTCTCCCCAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAAGATAATCCTATGTTCATATTGGGGATTAGGGTTCTCCCCAAAC  750

seq1  GTGTTCCTCCTCCTCTGACAGAAGTGCCTAAGGCTGACTAATGACATCAA  800
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTGTTCCTCCTCCTCTGACAGAAGTGCCTAAAGCTGACTAATGACATCAA  800

seq1  TAGCCCCAATGCTCTGACTGTTCTCAAGAAGCATCAACCGGGAGGTCTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCCAATGCTCTGACTGTTCTCAAGAAGCATCAACCGGGAGGTCTTC  850

seq1  ACTCTGCCATCCTGCGTCCAGGGGCTGACGTGCCCTCCTTCAAATG-TGC  899
      ||||||||||||||||||||||||||||||||| |||||||||||| |||
seq2  ACTCTGCCATCCTGCGTCCAGGGGCTGACGTGCTCTCCTTCAAATGTTGC  900

seq1  CATACCTTGAGACCACATTTGGGTTAAGCTGCCCCAAGAGCATACCAGAG  949
      |||||||||||||||||||||||||||||||||||| ||||||| |||| 
seq2  CATACCTTGAGACCACATTTGGGTTAAGCTGCCCCAGGAGCATA-CAGA-  948

seq1  GCTGGGGTACATGGGGCACTGTCAAGGTTTGCCTAAGGGCTC-TGTGAGT  998
      |||||||||||| ||||||||||||||||||||||| ||||| |||||||
seq2  GCTGGGGTACAT-GGGCACTGTCAAGGTTTGCCTAA-GGCTCTTGTGAGT  996

seq1  TCAGGAGCCTGTCGAAGAGTTGGGGCTCCTGTCCATCGTTCACTCATAGA  1048
      |||||||| ||| ||| |||| |||||||||| |||||||||||| ||||
seq2  TCAGGAGCTTGT-GAA-AGTT-GGGCTCCTGT-CATCGTTCACTC-TAGA  1041

seq1  C-ACAGGCAGCACTCCTTCACAGAGGGAGGCCTCAGGCAGGAC-TGTCTG  1096
      | |||||||||||||||||||||| ||| |||||| ||||||| ||||||
seq2  CAACAGGCAGCACTCCTTCACAGA-GGAAGCCTCA-GCAGGACTTGTCTG  1089

seq1  TT-GCCTTGATGGGCCTGAACTTCCTTGAG-GCTCCCAGGGTACTGAGGG  1144
      || || |||||||| |||||||| |||||| |||  |||| ||| || ||
seq2  TTGGCTTTGATGGG-CTGAACTTTCTTGAGAGCT--CAGGATAC-GAAGG  1135

seq1  CAATGTCGG  1153
      |||||||||
seq2  CAATGTCGG  1144

seq1: chr7_147130089_147131027
seq2: B6Ng01-127I16.g_70_994 (reverse)

seq1  AAGTTCGGCGCACGCCCGCTCAGTGCCGCCGTCGCTACAAGTTCCTCAAG  50
      |||||||||||| ||| ||| || ||   ||||| | ||   || |||| 
seq2  AAGTTCGGCGCA-GCCGGCTTAGAGC--GCGTCGTTCCA--GTCATCAA-  44

seq1  GACAAACTCCGAGACTCCCAGGGCCAGCCGTCCGGACCCTTCGATAACCA  100
      |||||||| |||||||||   |||||||||||||||||||||||| ||||
seq2  GACAAACT-CGAGACTCC--AGGCCAGCCGTCCGGACCCTTCGAT-ACCA  90

seq1  GATCCGCCAACTCATGGGGCTATTGGGGGACGATGGGCCGCCGAGGGTTC  150
       ||||| ||| ||||||||||||  |||||||| ||||||||||||||||
seq2  -ATCCG-CAAATCATGGGGCTAT--GGGGACGAAGGGCCGCCGAGGGTTC  136

seq1  GCCGCCGCTCTACTGGCCCTGGACGTCCCCAGCGCCGCGGCCGCTCGTCC  200
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCG-CGCTCTACTGGCCCTGGACGTCCCCAGCGCCGCGGCCGCTCGTCC  185

seq1  CTCTCCGCGTTAGCACCCGCACCTGCACCGGTGGAGCAAGGTAGGAGCAG  250
      ||||| ||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTCTCGGCGTTAGCACCCGCA-CTGCACCGGTGGAGCAAGGTAGGAGCAG  234

seq1  CCATGTGGGCAAGAAGGGTCTGGGTCTCCTGGGGAGGGGCGGAGCCCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGGGCAAGAAGGGTCTGGGTCTCCTGGGGAGGGGCGGAGCCCTGA  284

seq1  GTTGGGATTCCGTACGTTCCGCGCGTTTCTCTCGTAGAGGCCGAGCTGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGATTCCGTACGTTCCGCGCGTTTCTCTCGTAGAGGCCGAGCTGCC  334

seq1  GCTGGCTGCGG-AAAATGACGAACCTGCCCCTGCGCTCAGATTCAGTTCT  399
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCTGCGGAAAAATGACGAACCTGCCCCTGCGCTCAGATTCAGTTCT  384

seq1  TCCACGACGAAGTCTGCAGGTGCCCACCGCATTACCAGCTCTCCTCCTCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACGACGAAGTCTGCAGGTGCCCACCGCATTACCAGCTCTCCTCCTCT  434

seq1  TACGAGCACCGACACTCTGCCTCCTGAGCCGGGCCATACCTTCGAATCCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGAGCACCGACACTCTGCCTCCTGAGCCGGGCCATACCTTCGAATCCT  484

seq1  CCCCGACGCCAACCCCCGACCACGACGTGGAGACCCCGAATGAGCCTCCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGACGCCAACCCCCGACCACGACGTGGAGACCCCGAATGAGCCTCCT  534

seq1  GGCCTTTCCCAGGGCCGTGCTTCTTCCCCGCAGGTTGCTCCCCAGTCGTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTTCCCAGGGCCGTGCTTCTTCCCCGCAGGTTGCTCCCCAGTCGTT  584

seq1  GAATACCGCGTTGCTGCAGACCTTGACGCACTTGGGCGACATCTCAACAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACCGCGTTGCTGCAGACCTTGACGCACTTGGGCGACATCTCAACAG  634

seq1  TTCTGGGCCCTCTGCGCGACCAGCTGTCGACCCTGAACCAGCACGTGGAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGGCCCTCTGCGCGACCAGCTGTCGACCCTGAACCAGCACGTGGAG  684

seq1  CATCTACGAGGTTCCTTCGACCAAACCGTTTCTCTGGCGGTGGGGTTCAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTACGAGGTTCCTTCGACCAAACCGTTTCTCTGGCGGTGGGGTTCAT  734

seq1  TCTGGGCAGTGCAGCCTCCGAGCGGGGCATCCTTGGGGACTTGCGCCAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGCAGTGCAGCCTCCGAGCGGGGCATCCTTGGGGACTTGCGCCAAT  784

seq1  AAAGCTTTGTTATCAGTCCTCTTCTCCAGAAACGACTCCCAGTCTACCCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTTGTTATCAGTCCTCTTCTCCAGAAACGACTCCCAGTCTACCCC  834

seq1  GACCCCTGTTACTGTCCCCATCCCCATCTCAAACCTAGGTTCTTACCAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCCTGTTACTGTCCCCATCCCCATCTCAAACCTAGGTTCTTACCAAA  884

seq1  ATAAAGATTGTGTTTTCTACTTAATC-CTGTGAATGAATTC  939
      ||||||||||||||||||||||||||  |||||||||||||
seq2  ATAAAGATTGTGTTTTCTACTTAATCAATGTGAATGAATTC  925