BAC Information

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BAC

Clone NameB6Ng01-127N02
Chromosome7 (Build37)
Map Location 49,363,732 - 49,364,911
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627987, LOC100039269, LOC545955, EG628304, LOC668561, EG434172, LOC100039221, LOC668565, AI987944, EG269902, LOC100039375, EG628359, 2610021A01Rik, 2810426N06Rik, LOC668576, Gprc2a-rs5, LOC628372, EG668579, EG628403, EG628422, Gprc2a-rs1, EG628444, EG434174, EG637913, EG434175
Downstream geneLOC100039556, EG637898, Gprc2a-rs2, LOC434177, Vmn2r-ps60, 4933421I07Rik, LOC628503, BC063263, LOC100039449, EG637776, C330019L16Rik, EG434179, EG546965, LOC546964, LOC100039706, EG637572, LOC100039507, EG435975, LOC668606, EG668668, LOC100039543, LOC668612, LOC385199
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127N02.bB6Ng01-127N02.g
ACCDH929834DH929835
length1,172775
definitionDH929834|Mus musculus domesticus DNA, BAC clone: B6Ng01-127N02, 5' end.DH929835|Mus musculus domesticus DNA, BAC clone: B6Ng01-127N02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctggatttccttgaagtgcacatatactcttgagggaaaagattt
tgtaactgagtgaagagattcctgagttgctggagggacacgtactgact
atgttacacctagctgatttcagaaaaggactgtcaccattaaaattcac
gagcaatttctgctctagacatatctttgtctctcttttctttctttttt
cattttattattttttttgtcctaaacatctttattttcagacagatatt
aaatgtttatctgcttgccatatatgtttctagtgcttttcctccttcat
gtctatgtgctccaaaaaaatactctatttaggaggatggccacttaagg
acatttttacaattatctgatacttgtaatattaagaaatatcttcagga
aagtctgatttcttatgaaagtaatgacaagaattaagttctttctcttt
atagaggagataaagtgtgcttatccaaagtatatatccagaatctctat
agatcaatggaaaaagaccatgaagtagaaaaatacagattgtaaatgat
tgtgatcatatgagaatatctgtaggaagaaaatggataagaagaaagaa
ggaaaacatacttatgaatgtgaactgtgctcagtgtgacattgctgtgt
aattgttaaatccttgatgtggtgttaagtaaaaaaaaaaatcaaagata
gtaaacaaggaaatatgttcagaaataaaaactcatgaaatatttgtggt
cttgacatatttggtttgagactaacatagcaaagttgaccacagatcta
aaaatttatatcaccatgtcatgattcatatctcaatgaagtaagtcatg
gtagacacaaatgcttaaggatcacatcttaaattacataaatatgtgtt
atatgcctatcagcatggggacacaggatacttgttggagctccttctat
ttcattataattaaggccttttaatcttctcaatttcctttcttctctaa
cttcagcaacccaggcaacaatgtacatgtgtacatggtgttttaaacat
catgcagaacaggcccatatgttgaaagagtgattttcaggtacatggtc
atagtagttgcctttccataaggaatgaaaatattaaatccaaaaaaata
tgctttcatggtcaaattttat
gaattctggactaaaatcgtttgtcttgacatggtttgtttgggaggatt
taatggccgcttatattttgctgtgtgttactggtctatttaaatattca
tatgatcttgatttaactttgatagtcatattaaatgataaaattttcca
ttgtatttagagtttccagtttgggagagtacaaattattcaagtatctc
tactaagtgtgtgttgttatggctttctttttgtttcttgttttttgtaa
atttgaaaagtctctgaaataatcaacaaaggggagagggaacctgtaga
taccatatctagaggttagggatgactcctggttgagggatggggccacc
aactcacacccaaaaagaacccagaacttctgtctaatagaaatgtaggg
aaaaagagtggagcagagactgaaggaaaggccatccagacacttcccta
cctgcagatccaccccatctacagtggctaaacctagacactattgctga
tgccaagaagtgtttgctgacaagaacctggaatagttatctcctgagag
gctctgccagagcctgaccaaataaagatgcagatgctctgaaacttaca
actgaccattggactgagcatgaggaacacaatggagaacttagtggaag
gactgaaaaactgagtgggtttgcaaccccataagaagaacatattgacc
aaccaggactccccctcccaagagctaaccaactaaagagtaacacatgg
agtgacccatggctccagctgcaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_49363732_49364911
seq2: B6Ng01-127N02.b_48_1219

seq1  GAATTCTGGATTTCCTTGAAGTGCACATATACTCTTGAGGGAAAAGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGATTTCCTTGAAGTGCACATATACTCTTGAGGGAAAAGATTT  50

seq1  TGTAACTGAGTGAAGAGATTCCTGAGTTGCTGGAGGGACACGTACTGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACTGAGTGAAGAGATTCCTGAGTTGCTGGAGGGACACGTACTGACT  100

seq1  ATGTTACACCTAGCTGATTTCAGAAAAGGACTGTCACCATTAAAATTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTACACCTAGCTGATTTCAGAAAAGGACTGTCACCATTAAAATTCAC  150

seq1  GAGCAATTTCTGCTCTAGACATATCTTTGTCTCTCTTTTCTTTCTTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAATTTCTGCTCTAGACATATCTTTGTCTCTCTTTTCTTTCTTTTTT  200

seq1  CATTTTATTATTTTTTTTGTCCTAAACATCTTTATTTTCAGACAGATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTATTATTTTTTTTGTCCTAAACATCTTTATTTTCAGACAGATATT  250

seq1  AAATGTTTATCTGCTTGCCATATATGTTTCTAGTGCTTTTCCTCCTTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTTATCTGCTTGCCATATATGTTTCTAGTGCTTTTCCTCCTTCAT  300

seq1  GTCTATGTGCTCCAAAAAAATACTCTATTTAGGAGGATGGCCACTTAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATGTGCTCCAAAAAAATACTCTATTTAGGAGGATGGCCACTTAAGG  350

seq1  ACATTTTTACAATTATCTGATACTTGTAATATTAAGAAATATCTTCAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTTACAATTATCTGATACTTGTAATATTAAGAAATATCTTCAGGA  400

seq1  AAGTCTGATTTCTTATGAAAGTAATGACAAGAATTAAGTTCTTTCTCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTGATTTCTTATGAAAGTAATGACAAGAATTAAGTTCTTTCTCTTT  450

seq1  ATAGAGGAGATAAAGTGTGCTTATCCAAAGTATATATCCAGAATCTCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGGAGATAAAGTGTGCTTATCCAAAGTATATATCCAGAATCTCTAT  500

seq1  AGATCAATGGAAAAAGACCATGAAGTAGAAAAATACAGATTGTAAATGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAATGGAAAAAGACCATGAAGTAGAAAAATACAGATTGTAAATGAT  550

seq1  TGTGATCATATGAGAATATCTGTAGGAAGAAAATGGATAAGAAGAAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATCATATGAGAATATCTGTAGGAAGAAAATGGATAAGAAGAAAGAA  600

seq1  GGAAAACATACTTATGAATGTGAACTGTGCTCAGTGTGACATTGCTGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAACATACTTATGAATGTGAACTGTGCTCAGTGTGACATTGCTGTGT  650

seq1  AATTGTTAAATCCTTGATGTGGTGTTAAGTAAAAAAAAAAATCAAAGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTTAAATCCTTGATGTGGTGTTAAGTAAAAAAAAAAATCAAAGATA  700

seq1  GTAAACAAGGAAATATGTTCAGAAATAAAAACTCATGAAATATTTGTGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACAAGGAAATATGTTCAGAAATAAAAACTCATGAAATATTTGTGGT  750

seq1  CTTGACATATTTGGTTTGAGACTAACATAGCAAAGTTGACCACAGATCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACATATTTGGTTTGAGACTAACATAGCAAAGTTGACCACAGATCTA  800

seq1  AAAATTTATATCACCATGTCATGATTCATATCTCAATGAAGTAAGTCATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTATATCACCATGTCATGATTCATATCTCAATGAAGTAAGTCATG  850

seq1  GTAGACACAAATGCTTAAGGATCACATCTTAAATTACATAAATATGTGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACACAAATGCTTAAGGATCACATCTTAAATTACATAAATATGTGTT  900

seq1  ATATGCCTATCAGCATGGGGACACAGGATACTTGTTGGAGCTCCTTCTAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCCTATCAGCATGGGGACACAGGATACTTGTTGGAGCTCCTTCTAT  950

seq1  TTCATTATAATTAAGGCCTTTTATTCTTCTCAATTTCCTTTCTTCTCTAA  1000
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTCATTATAATTAAGGCCTTTTAATCTTCTCAATTTCCTTTCTTCTCTAA  1000

seq1  CTTCAGCAACCCAGGCACCAATGTACATGTGTACATGGTGTTTTAGACAT  1050
      ||||||||||||||||| ||||||||||||||||||||||||||| ||||
seq2  CTTCAGCAACCCAGGCAACAATGTACATGTGTACATGGTGTTTTAAACAT  1050

seq1  CATGCAGGAACAGGCCCATATGTTGAAAGAGTGTATTTTCAGGTACATGT  1100
      |||||| |||||||||||||||||||||||||| ||||||||||||||| 
seq2  CATGCA-GAACAGGCCCATATGTTGAAAGAGTG-ATTTTCAGGTACATG-  1097

seq1  GTCATAAGTAGTTGGCTTTTCCATGATGAATGAAAATATTTTAATCCATA  1150
      ||||| ||||||| || ||||||| | ||||||||||| || |||||| |
seq2  GTCAT-AGTAGTT-GCCTTTCCATAAGGAATGAAAATA-TTAAATCCAAA  1144

seq1  AAATTATTCCTTTTCATAGTCAAATTTTAT  1180
      ||| ||| |  |||||| ||||||||||||
seq2  AAAATATGC--TTTCATGGTCAAATTTTAT  1172