BAC Information

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BAC

Clone NameB6Ng01-128H12
Chromosome7 (Build37)
Map Location 30,731,875 - 30,863,046
singlet/doubletdoublet
Overlap geneZfp74, LOC625437, LOC100043796, Zfp568, Zfp14, LOC100043798, Zfp82, Zfp566
Upstream geneActn4, Eif3s12, Map4k1, Ryr1, Rasgrp4, 1110006G06Rik, Spred3, Ggn, Psmd8, A230107C01Rik, Kcnk6, Yif1b, Spint2, Ppp1r14a, Neud4, Sipa1l3, LOC100043791, 4932431P20Rik, 4930432E11Rik, 1700067C01Rik, Zfp84, LOC100043794, Zfp30, EG625349, 6330581L23Rik, BC027344, Zfp420, Zfp27
Downstream geneZfp260, Zfp382, Zfp146, EG330503, Cox7a1, Capns1, Tbcb, Polr2i, Ovol3, Wdr62, EG668354, 1700020L13Rik, Clip3, Alkbh6, AI428936, 0610010E21Rik, Lrfn3, Tyrobp, Hcst, AY078069, Aplp1, Kirrel2, Nphs1, LOC100034728, Prodh2, Gm1082, Snx26, BC053749, Hspb6, 1810054G18Rik, Psenen, U2af1l4, Tmem149, Wbp7, Zbtb32, Upk1a, Cox6b1, Etv2, 3100004P22Rik, 2310022K01Rik, 4930479M11Rik, 2200002J24Rik, EG233075, Atp4a, Tmem147, Gapdhs, Sbsn, Dmkn, Krtdap, Ffar2, Ffar3, Ffar1, Cd22, Mag, Hamp2, Usf2-ps1, Hamp1, Usf2, LOC100043823, Lsr, Tmem162, Fxyd5, Fxyd7, Fxyd1, Lgi4, Fxyd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128H12.bB6Ng01-128H12.g
ACCDH930311DH930312
length643973
definitionDH930311|Mus musculus domesticus DNA, BAC clone: B6Ng01-128H12, 5' end.DH930312|Mus musculus domesticus DNA, BAC clone: B6Ng01-128H12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(30,731,875 - 30,732,517)(30,862,066 - 30,863,046)
sequence
gaattcaggaaagtggtcctagtagcctctaccccaattggttctggggt
agcagagatgaaatatagatttttaaaggtgttcattctggaataccgga
ggagaggggttgctagacaaagtgcccagtcaatgagctagtcaagacat
atcaaaattaactgacatgtgtgtatgcctttcatttgtaaatccagaga
gctcttgggtgcatgcatgtgacccgctgggagctcagggcaggctaact
accgctacaagaaatagctcataaaaatgagccaaaataaataccatgct
tcaaaataggtaaaatcagcatggtaagtatggttatttcacttctaaac
tttcaattttgcttatttatataccaatttaaaaccagggctcaggggtg
gagagatggctcagctgttaagagcactgactgctcttccagaggtcctg
agttcaaatcccagcaaccacattgtggttcacaaccatctgtaacaaga
tctgatgccctcttctggagtgcctgaagatagcaacaatgtactcatat
acataaaataaataaacaaataaataaatcaaaggaaggaagaaggaagg
aaggaaggaaggaaggaaggaaggaaggaagggaagggaggga
gaattcacactggcgagaagccttatgaatgtaaagaatgtgggaaggct
tttagtagcggttcaaatttcactcaacaccagagaattcacaccggaga
gaaaccctacgaatgtaaggaatgcggcaatgcctttagtcagagttccc
aacttattaaacatcaaagaatccacaccggtgagaagccctatgagtgt
aaggagtgtgagaaggctttccggtcgggttctgacctcaccagacacca
gagaatccacaccggagagaagccgtatgaatgtaagatttgtgggaaag
cctattctcagagttcacaactcatcagtcatcacagaattcatggtggt
aagaaagcctacgaagatgaggacggtgggaagaactttatctataactc
acagcctattcagcatcagaacttatattggtgatgaaccgacacataca
tgatgtatgggaagactcagaactgtcagagactctgtagaggccctcta
gaccggagaatgtcgaaacagttgacttgttgacaaacttgttcatctaa
gagaaactcatattggagaagcaccctatgaatgcagtatattctggaag
ctgtctagtaacagcttgtatttcttttgactcagattattcagtctggc
aaataattgaacagaaaacaatgctttgatcttaaacgtaacaatctgtg
tggcagtgtaattttatggttttcgttctttcctttttttctcataattg
cgtcattaacttttttttttttcctttttggaggggggtatcttgggaga
cagggttctctgtgtagccgctggctgtcctaagttctctgtagactagg
ctggctacaaactcagagatctgcctacctccgcttcctgaacgctgggg
attaaagggtgtgcgcgtattgcctgctgtatctaatggtttacggggct
gtctagagtcttatgagctattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_30731875_30732517
seq2: B6Ng01-128H12.b_49_691

seq1  GAATTCAGGAAAGTGGTCCTAGTAGCCTCTACCCCAATTGGTTCTGGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAAAGTGGTCCTAGTAGCCTCTACCCCAATTGGTTCTGGGGT  50

seq1  AGCAGAGATGAAATATAGATTTTTAAAGGTGTTCATTCTGGAATACCGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGATGAAATATAGATTTTTAAAGGTGTTCATTCTGGAATACCGGA  100

seq1  GGAGAGGGGTTGCTAGACAAAGTGCCCAGTCAATGAGCTAGTCAAGACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGGGTTGCTAGACAAAGTGCCCAGTCAATGAGCTAGTCAAGACAT  150

seq1  ATCAAAATTAACTGACATGTGTGTATGCCTTTCATTTGTAAATCCAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAATTAACTGACATGTGTGTATGCCTTTCATTTGTAAATCCAGAGA  200

seq1  GCTCTTGGGTGCATGCATGTGACCCGCTGGGAGCTCAGGGCAGGCTAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTGGGTGCATGCATGTGACCCGCTGGGAGCTCAGGGCAGGCTAACT  250

seq1  ACCGCTACAAGAAATAGCTCATAAAAATGAGCCAAAATAAATACCATGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGCTACAAGAAATAGCTCATAAAAATGAGCCAAAATAAATACCATGCT  300

seq1  TCAAAATAGGTAAAATCAGCATGGTAAGTATGGTTATTTCACTTCTAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATAGGTAAAATCAGCATGGTAAGTATGGTTATTTCACTTCTAAAC  350

seq1  TTTCAATTTTGCTTATTTATATACCAATTTAAAACCAGGGCTCAGGGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATTTTGCTTATTTATATACCAATTTAAAACCAGGGCTCAGGGGTG  400

seq1  GAGAGATGGCTCAGCTGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATGGCTCAGCTGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTG  450

seq1  AGTTCAAATCCCAGCAACCACATTGTGGTTCACAACCATCTGTAACAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAAATCCCAGCAACCACATTGTGGTTCACAACCATCTGTAACAAGA  500

seq1  TCTGATGCCCTCTTCTGGAGTGCCTGAAGATAGCAACAATGTACTCATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATGCCCTCTTCTGGAGTGCCTGAAGATAGCAACAATGTACTCATAT  550

seq1  ACATAAAATAAATAAACAAATAAATAAATCAAAGGAAGGAAGAAGGAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAATAAATAAACAAATAAATAAATCAAAGGAAGGAAGAAGGAAGG  600

seq1  AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAAGGGAGGGA  643
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAAGGGAGGGA  643

seq1: chr7_30862066_30863046
seq2: B6Ng01-128H12.g_70_1042 (reverse)

seq1  GAATATGCTCATAAAGACTCAAAGAACAAGCCACCGTAAAACCATTAAGA  50
      ||||| |||||| |||||||  |||   |||| |||| |||||||||   
seq2  GAATA-GCTCAT-AAGACTC-TAGA--CAGCC-CCGT-AAACCATTA--G  41

seq1  ATACAGCAGGCAATAACGGCGCACA-CCTTTAAT-CCCAGCGTTCAGGAG  98
      |||||||||||||||   ||||||| |||||||| |||||||||||||| 
seq2  ATACAGCAGGCAATA--CGCGCACACCCTTTAATCCCCAGCGTTCAGGAA  89

seq1  GCGGAGGTAGGCAGATCTCTGAGTTTGTAGCCAGCCTAGTCTACAGAGAA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGAGGTAGGCAGATCTCTGAGTTTGTAGCCAGCCTAGTCTACAGAGAA  139

seq1  CTTCAGGACAGCCAGC-GCTACACAGAGAAACCCTGTCT-CCAAGATACC  196
      ||| |||||||||||| ||||||||||| |||||||||| ||||||||||
seq2  CTT-AGGACAGCCAGCGGCTACACAGAG-AACCCTGTCTCCCAAGATACC  187

seq1  CCCCTCCAAAAAGG-AAAAAAAAAAAGTTAATGACGCAATTATGAGAAAA  245
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CCCCTCCAAAAAGGAAAAAAAAAAAAGTTAATGACGCAATTATGAGAAAA  237

seq1  AAAGGAAAGAACGAAAACCATAAAATTACACTGCCACACAGATTGTTACG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAAGAACGAAAACCATAAAATTACACTGCCACACAGATTGTTACG  287

seq1  TTTAAGATCAAAGCATTGTTTTCTGTTCAATTATTTGCCAGACTGAATAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGATCAAAGCATTGTTTTCTGTTCAATTATTTGCCAGACTGAATAA  337

seq1  TCTGAGTCAAAAGAAATACAAGCTGTTACTAGACAGCTTCCAGAATATAC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTCAAAAGAAATACAAGCTGTTACTAGACAGCTTCCAGAATATAC  387

seq1  TGCATTCATAGGGTGCTTCTCCAATATGAGTTTCTCTTAGATGAACAAGT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTCATAGGGTGCTTCTCCAATATGAGTTTCTCTTAGATGAACAAGT  437

seq1  TTGTCAACAAGTCAACTGTTTCGACATTCTCCGGTCTAGAGGGCCTCTAC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAACAAGTCAACTGTTTCGACATTCTCCGGTCTAGAGGGCCTCTAC  487

seq1  AGAGTCTCTGACAGTTCTGAGTCTTCCCATACATCATGTATGTGTCGGTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCTCTGACAGTTCTGAGTCTTCCCATACATCATGTATGTGTCGGTT  537

seq1  CATCACCAATATAAGTTCTGATGCTGAATAGGCTGTGAGTTATAGATAAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACCAATATAAGTTCTGATGCTGAATAGGCTGTGAGTTATAGATAAA  587

seq1  GTTCTTCCCACCGTCCTCATCTTCGTAGGCTTTCTTACCACCATGAATTC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTCCCACCGTCCTCATCTTCGTAGGCTTTCTTACCACCATGAATTC  637

seq1  TGTGATGACTGATGAGTTGTGAACTCTGAGAATAGGCTTTCCCACAAATC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGACTGATGAGTTGTGAACTCTGAGAATAGGCTTTCCCACAAATC  687

seq1  TTACATTCATACGGCTTCTCTCCGGTGTGGATTCTCTGGTGTCTGGTGAG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTCATACGGCTTCTCTCCGGTGTGGATTCTCTGGTGTCTGGTGAG  737

seq1  GTCAGAACCCGACCGGAAAGCCTTCTCACACTCCTTACACTCATAGGGCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAACCCGACCGGAAAGCCTTCTCACACTCCTTACACTCATAGGGCT  787

seq1  TCTCACCGGTGTGGATTCTTTGATGTTTAATAAGTTGGGAACTCTGACTA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACCGGTGTGGATTCTTTGATGTTTAATAAGTTGGGAACTCTGACTA  837

seq1  AAGGCATTGCCGCATTCCTTACATTCGTAGGGTTTCTCTCCGGTGTGAAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCATTGCCGCATTCCTTACATTCGTAGGGTTTCTCTCCGGTGTGAAT  887

seq1  TCTCTGGTGTTGAGTGAAATTTGAACCGCTACTAAAAGCCTTCCCACATT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGTGTTGAGTGAAATTTGAACCGCTACTAAAAGCCTTCCCACATT  937

seq1  CTTTACATTCATAAGGCTTCTCGCCAGTGTGAATTC  981
      ||||||||||||||||||||||||||||||||||||
seq2  CTTTACATTCATAAGGCTTCTCGCCAGTGTGAATTC  973