BAC Information

Click to search

BAC

Clone NameB6Ng01-128O03
Chromosome7 (Build37)
Map Location 118,131,705 - 118,286,035
singlet/doubletdoublet
Overlap geneCtr9, Eif4g2, LOC100043221, LOC100042658
Upstream geneIpo7, AA474408, Zfp143, Wee1, Swap70, EG668368, Sbf2, LOC668246, Adm, B430319F04Rik, Ampd3, Rnf141, Xlkd1, Mrvi1
Downstream geneLOC384658, Galntl4, LOC668399, LOC100042678, Usp47, Dkk3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128O03.bB6Ng01-128O03.g
ACCDH930617DH930618
length720939
definitionDH930617|Mus musculus domesticus DNA, BAC clone: B6Ng01-128O03, 5' end.DH930618|Mus musculus domesticus DNA, BAC clone: B6Ng01-128O03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,285,316 - 118,286,035)(118,131,705 - 118,132,641)
sequence
gaattcagtggaacattacgcttcactagagagctttatatgcaagaaat
ttcttgccatattaacaaagtcaaaaatgtgctgccaaatcatgttgaat
acttaaatcagttatgtacactgacatatgcacttattgttaggtttcaa
acctgggacaaagggctgaggtgcctacttaacagatcaaagggaacacc
agctgccccatattccctgcaacccctcagttcctacctggctggcatac
actgcccacttctctgaactccccagcttagggaactgggcagctcttcc
ctatataatccaaccatttgggctacccgatctctttgtacctttgggcc
tcctggctactacacccaattcccctctctcccctctcccgacatgaaac
agctcagtgtgatcatgtctactctggactctcccagaggtctgtgactc
tgactagggtctcccaaaaaaaaaaaactacaataagccttctcctcctc
tatacctatgtgagcagtcatacttcctttcctctttctttctttctttt
ttttcattcacttacatgaatatataaaaaatctattggctgtgatgagt
gaaaaaagaatgtaatcagacaggatggaatgagaacatatttttctcaa
tctgtattttacaatttcggtagtaattatttctagtaaaatgtttgtgg
tgatgggtgtagagagggtg
gaattcaacgacttggctacgctggctgctggcaagccctggggacacta
ccatctctgactccctgcgtaggatgtaggctccaactggtcacatctga
gataatatgagtgtgctggcataatgtgagtcagcttggcataagccaga
gtcatttgggaggatggaagcttagttgagaaaatgctcccaccagactg
gtctgtggacaagcctatggtgcattttcttgtttgtttatttgctttgg
ttttgtttttcttgttgtttttattccaactgtagtttcccctactttca
ctcctcccagtccatccccccctcccctagatccactcctcctccatttc
ccttcatgaggagcaagttagtaagcagcattcctccacagacagcctct
gcatcattttcctgccctgactgaaagggagactggtaggttgctacttg
tattcaaatgctatatactggctcccaggatctggctgccccctgcccat
gaggagatagatcctcagggatggggagatcctcgtgtgtaccaaataac
tcgtgtaaccttgctcccgagttaattagtcaataaaaggccaaagccta
tgattgggcagaaagggagtcaggcttccagttacctagctgggcattac
aggtagagagagataggaagaagggacacggggagaggagaaggccacca
tgagaggagatggaccattagcaaatggccagaagaaacagcaagtgaca
agggacatgtggctgggaaataagttagaatagctccaaacctgcccaac
ctaggcttacagcttgtaaattaaatacctgggttgtgtgtcttttatag
gggctagctagatttaattcttttttcacctgacttccttcatgatggaa
ctgtgatgggactatagtgaaataaatcctttccacttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_118285316_118286035
seq2: B6Ng01-128O03.b_49_768 (reverse)

seq1  CACCCTCTCTACACCCATCACCACAAACATTTTACTAGAAATAATTACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTCTCTACACCCATCACCACAAACATTTTACTAGAAATAATTACTA  50

seq1  CCGAAATTGTAAAATACAGATTGAGAAAAATATGTTCTCATTCCATCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAAATTGTAAAATACAGATTGAGAAAAATATGTTCTCATTCCATCCTG  100

seq1  TCTGATTACATTCTTTTTTCACTCATCACAGCCAATAGATTTTTTATATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTACATTCTTTTTTCACTCATCACAGCCAATAGATTTTTTATATA  150

seq1  TTCATGTAAGTGAATGAAAAAAAAGAAAGAAAGAAAGAGGAAAGGAAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTAAGTGAATGAAAAAAAAGAAAGAAAGAAAGAGGAAAGGAAGTA  200

seq1  TGACTGCTCACATAGGTATAGAGGAGGAGAAGGCTTATTGTAGTTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGCTCACATAGGTATAGAGGAGGAGAAGGCTTATTGTAGTTTTTTT  250

seq1  TTTTTGGGAGACCCTAGTCAGAGTCACAGACCTCTGGGAGAGTCCAGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGGAGACCCTAGTCAGAGTCACAGACCTCTGGGAGAGTCCAGAGT  300

seq1  AGACATGATCACACTGAGCTGTTTCATGTCGGGAGAGGGGAGAGAGGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGATCACACTGAGCTGTTTCATGTCGGGAGAGGGGAGAGAGGGGA  350

seq1  ATTGGGTGTAGTAGCCAGGAGGCCCAAAGGTACAAAGAGATCGGGTAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGTGTAGTAGCCAGGAGGCCCAAAGGTACAAAGAGATCGGGTAGCC  400

seq1  CAAATGGTTGGATTATATAGGGAAGAGCTGCCCAGTTCCCTAAGCTGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGGTTGGATTATATAGGGAAGAGCTGCCCAGTTCCCTAAGCTGGGG  450

seq1  AGTTCAGAGAAGTGGGCAGTGTATGCCAGCCAGGTAGGAACTGAGGGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAGAGAAGTGGGCAGTGTATGCCAGCCAGGTAGGAACTGAGGGGTT  500

seq1  GCAGGGAATATGGGGCAGCTGGTGTTCCCTTTGATCTGTTAAGTAGGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGAATATGGGGCAGCTGGTGTTCCCTTTGATCTGTTAAGTAGGCAC  550

seq1  CTCAGCCCTTTGTCCCAGGTTTGAAACCTAACAATAAGTGCATATGTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCCCTTTGTCCCAGGTTTGAAACCTAACAATAAGTGCATATGTCAG  600

seq1  TGTACATAACTGATTTAAGTATTCAACATGATTTGGCAGCACATTTTTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACATAACTGATTTAAGTATTCAACATGATTTGGCAGCACATTTTTGA  650

seq1  CTTTGTTAATATGGCAAGAAATTTCTTGCATATAAAGCTCTCTAGTGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTAATATGGCAAGAAATTTCTTGCATATAAAGCTCTCTAGTGAAG  700

seq1  CGTAATGTTCCACTGAATTC  720
      ||||||||||||||||||||
seq2  CGTAATGTTCCACTGAATTC  720

seq1: chr7_118131705_118132641
seq2: B6Ng01-128O03.g_68_1000

seq1  GAATTCAACGACTTGGCTACGCTGGCTGCTGGCAAGCCCTGGGGACACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACGACTTGGCTACGCTGGCTGCTGGCAAGCCCTGGGGACACTA  50

seq1  CCATCTCTGACTCCCTGCGTAGGATGTAGGCTCCAACTGGTCACATCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCTGACTCCCTGCGTAGGATGTAGGCTCCAACTGGTCACATCTGA  100

seq1  GATAATATGAGTGTGCTGGCATAATGTGAGTCAGCTTGGCATAAGCCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATATGAGTGTGCTGGCATAATGTGAGTCAGCTTGGCATAAGCCAGA  150

seq1  GTCATTTGGGAGGATGGAAGCTTAGTTGAGAAAATGCTCCCACCAGACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTGGGAGGATGGAAGCTTAGTTGAGAAAATGCTCCCACCAGACTG  200

seq1  GTCTGTGGACAAGCCTATGGTGCATTTTCTTGTTTGTTTATTTGCTTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTGGACAAGCCTATGGTGCATTTTCTTGTTTGTTTATTTGCTTTGG  250

seq1  TTTTGTTTTTCTTGTTGTTTTTATTCCAACTGTAGTTTCCCCTACTTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTTCTTGTTGTTTTTATTCCAACTGTAGTTTCCCCTACTTTCA  300

seq1  CTCCTCCCAGTCCATCCCCCCCTCCCCTAGATCCACTCCTCCTCCATTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCCAGTCCATCCCCCCCTCCCCTAGATCCACTCCTCCTCCATTTC  350

seq1  CCTTCATGAGGAGCAAGTTAGTAAGCAGCATTCCTCCACAGACAGCCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCATGAGGAGCAAGTTAGTAAGCAGCATTCCTCCACAGACAGCCTCT  400

seq1  GCATCATTTTCCTGCCCTGACTGAAAGGGAGACTGGTAGGTTGCTACTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCATTTTCCTGCCCTGACTGAAAGGGAGACTGGTAGGTTGCTACTTG  450

seq1  TATTCAAATGCTATATACTGGCTCCCAGGATCTGGCTGCCCCCTGCCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAAATGCTATATACTGGCTCCCAGGATCTGGCTGCCCCCTGCCCAT  500

seq1  GAGGAGATAGATCCTCAGGGATGGGGAGATCCTCGTGTGTACCAAATAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGATAGATCCTCAGGGATGGGGAGATCCTCGTGTGTACCAAATAAC  550

seq1  TCGTGTAACCTTGCTCCCGAGTTAATTAGTCAATAAAAGGCCAAAGCCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGTAACCTTGCTCCCGAGTTAATTAGTCAATAAAAGGCCAAAGCCTA  600

seq1  TGATTGGGCAGAAAGGGAGTCAGGCTTCCAGTTACCTAGCTGGGCATTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGGGCAGAAAGGGAGTCAGGCTTCCAGTTACCTAGCTGGGCATTAC  650

seq1  AGGTAGAGAGAGATAGGAAGAAGGGACACGGGGAGAGGAGAAGGCCACCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGAGAGAGATAGGAAGAAGGGACACGGGGAGAGGAGAAGGCCACCA  700

seq1  TGAGAGGAGATGGACCATTAGCAAATGGCCAGAAGAAACAGCAAGTGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGGAGATGGACCATTAGCAAATGGCCAGAAGAAACAGCAAGTGACA  750

seq1  AGGGACATGTGGCTGGGAAATAAGTTAGAATAGCTCCAAACCTGCCCAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACATGTGGCTGGGAAATAAGTTAGAATAGCTCCAAACCTGCCCAAC  800

seq1  CTAGGCTTACAGCTTGTAAATAAAATACCTGGGTTGTGTGTCTTTTATAG  850
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTAGGCTTACAGCTTGTAAATTAAATACCTGGGTTGTGTGTCTTTTATAG  850

seq1  GGGCTAGCTAGAATTTAATTCTTTTTTCACCTGACTTCCTTCAATGATGG  900
      ||||||||||| |||||||||||||||||||||||||||||| |||||||
seq2  GGGCTAGCTAG-ATTTAATTCTTTTTTCACCTGACTTCCTTC-ATGATGG  898

seq1  -ACTGTGATGTGGACTATAGGTTGAAATAAATCCTTTC  937
       ||||||||| |||||||||  ||||||||||||||||
seq2  AACTGTGATG-GGACTATAG--TGAAATAAATCCTTTC  933