BAC Information

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BAC

Clone NameB6Ng01-128O21
Chromosome7 (Build37)
Map Location 90,324,444 - 90,325,129
singlet/doubletsinglet
Overlap geneA530021J07Rik
Upstream geneSh3gl3, Adamtsl3, 1700129I04Rik, Eftud1, LOC100038986, LOC619808, Rkhd3, LOC619909
Downstream geneEG666160, Tmc3, Stard5, Il16, Phgdh-ps1, LOC666170, 1700026D08Rik, Mesdc1, Mesdc2, 9930013L23Rik, 2210412D01Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128O21.bB6Ng01-128O21.g
ACCDH930650DH930651
length1,151689
definitionDH930650|Mus musculus domesticus DNA, BAC clone: B6Ng01-128O21, 5' end.DH930651|Mus musculus domesticus DNA, BAC clone: B6Ng01-128O21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatcctaatcatcagggaaatgcaaatcaaaacaaccctgagatt
ccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagca
gatgctggtgaggatgtggagaaagaggaacactcctccattgttggtgg
gattgcaagcttgtacaaccactctggaagtcagtctggaggttcctcag
aaaattggacatagtactaccggaggatcccaaaatacctctcctgggca
tatatccagaagatgttccaacctgtaagaaggacacatgctccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacccagatt
tccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgg
agtactactcagctattaaaaagaaagaatttatgaaattcctaggcaaa
tggatggaactggagggcatcatcctgagtgaagtaacccaatcaccaag
gaactcacacaatatgtactcactgataagtggatattagcccagaaact
taggatacccaagatataagatacattttgctaaatgcatgaaactgaag
aagaacgaagaccaaagtgtggacactttgtcccttcttagaattggcaa
caaaacacccattgaaggagttacagagacaaagtttggagctgtgacga
aaggatggaccatctagagactgccatatctggggatccatcccataatc
agcttccaaaaggctgacaccattgcatacactagcaagattttgctgaa
aggacccagatatagctgtctcttgtgagactatgcaggggcctagcaaa
cacagaagtggatgctcacagtcagctattggatggatcatagggcccca
atggcggagctagagagagtactcaaggagctgaggggatctcaccctat
ggggtggaacaacaacatgaacttggtgtctcttgctgatatggtatcag
agatggcctggttggccatcagcgaaagagaggccatgtcatgcagacta
taatgctcagtgcaggtaaccaagggccagaaattggaatgggtgtgttg
g
gaattcattgctccttgatacactgaaaacgcaagcagtttcttatacct
ttaggttccttaacaaccaaagagcaattattcacattaaattttctcgg
tgaaaattcgctggtgggtttgttatgtttgcagtggaacagcctgataa
gtgcatctgcagctaattctggaagcaaaaggagtgccacgggagaaaca
aaagaaagagctccaaagaggaagccagcaggctggtgacattgtaagga
gtggggcaacatggcagaaaaggaaaagctttggaagaagagagttccag
ggctttgtatgcacaacttccaggcttcctgacatgggaatgagaatgag
tgttccagggactggtgtcttggtaacagagcagtgatgtttgagtatga
taagggctcaggcaaggaaactggcctgaaagagaatggccataagtaga
aagatgagcaacggtgtcaacgtggctttagggagcatgaagggtaaatg
catcccctttctgcaaaagcaaaggcagctggcagggggaaagaccatcc
cctgagtcacctaaagggggctaaccaggaaaggcttcagtgtgaattga
aggccccctataatggttcagagcccagaaagaggagggggcacatgatg
ggctattcttggtttgtcaactttgactatgtctggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_90324444_90325129
seq2: B6Ng01-128O21.g_71_759 (reverse)

seq1  CTTCCAGACATAGTC-AAGTTGAC-AACCAAGAATAG-CCATCATGTGCC  47
      ||||||||||||||| |||||||| |||||||||||| ||||||||||||
seq2  CTTCCAGACATAGTCAAAGTTGACAAACCAAGAATAGCCCATCATGTGCC  50

seq1  CCCTCCTCTTTCTGGGCTCTGAACCATTATAGGGGGCCTTCAATTCACAC  97
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCTCTTTCTGGGCTCTGAACCATTATAGGGGGCCTTCAATTCACAC  100

seq1  TGAAGCCTTTCCTGGTTAGCCCCCTTTAGGTGACTCAGGGGATGGTCTTT  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCCTTTCCTGGTTAGCCCCCTTTAGGTGACTCAGGGGATGGTCTTT  150

seq1  CCCCCTGCCAGCTGCCTTTGCTTTTGCAGAAAGGGGATGCATTTACCCTT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTGCCAGCTGCCTTTGCTTTTGCAGAAAGGGGATGCATTTACCCTT  200

seq1  CATGCTCCCTAAAGCCACGTTGACACCGTTGCTCATCTTTCTACTTATGG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTCCCTAAAGCCACGTTGACACCGTTGCTCATCTTTCTACTTATGG  250

seq1  CCATTCTCTTTCAGGCCAGTTTCCTTGCCTGAGCCCTTATCATACTCAAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTCTTTCAGGCCAGTTTCCTTGCCTGAGCCCTTATCATACTCAAA  300

seq1  CATCACTGCTCTGTTACCAAGACACCAGTCCCTGGAACACTCATTCTCAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACTGCTCTGTTACCAAGACACCAGTCCCTGGAACACTCATTCTCAT  350

seq1  TCCCATGTCAGGAAGCCTGGAAGTTGTGCATACAAAGCCCTGGAACTCTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATGTCAGGAAGCCTGGAAGTTGTGCATACAAAGCCCTGGAACTCTC  400

seq1  TTCTTCCAAAGCTTTTCCTTTTCTGCCATGTTGCCCCACTCCTTACAATG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCAAAGCTTTTCCTTTTCTGCCATGTTGCCCCACTCCTTACAATG  450

seq1  TCACCAGCCTGCTGGCTTCCTCTTTGGAGCTCTTTCTTTTGTTTCTCCCG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAGCCTGCTGGCTTCCTCTTTGGAGCTCTTTCTTTTGTTTCTCCCG  500

seq1  TGGCACTCCTTTTGCTTCCAGAATTAGCTGCAGATGCACTTATCAGGCTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACTCCTTTTGCTTCCAGAATTAGCTGCAGATGCACTTATCAGGCTG  550

seq1  TTCCACTGCAAACATAACAAACCCACCAGCGAATTTTCACCGAGAAAATT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACTGCAAACATAACAAACCCACCAGCGAATTTTCACCGAGAAAATT  600

seq1  TAATGTGAATAATTGCTCTTTGGTTGTTAAGGAACCTAAAGGTATAAGAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTGAATAATTGCTCTTTGGTTGTTAAGGAACCTAAAGGTATAAGAA  650

seq1  ACTGCTTGCGTTTTCAGTGTATCAAGGAGCAATGAATTC  686
      |||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTTGCGTTTTCAGTGTATCAAGGAGCAATGAATTC  689