BAC Information

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BAC

Clone NameB6Ng01-129N20
Chromosome7 (Build37)
Map Location 108,375,281 - 108,488,266
singlet/doubletdoublet
Overlap geneFchsd2, Atg16l2, Stard10
Upstream genePgm2l1, Gpx2-ps1, P4ha3, Ppme1, AU020772, Ucp3, Ucp2, Dnajb13, LOC667112, Chchd8, Mrpl48, LOC100041155, Rab6, LOC100041167, Plekhb1, B930006L02Rik, LOC100041204, Tnfrsf19l, Arhgef17, P2ry6, P2ry2, LOC100049539, EG435996, EG622673
Downstream geneCentd2, Pde2a, Art2a, EG630138, Art2b, Clpb, Phox2a, Inppl1, Folr2, Folr1, 3200002M19Rik, F930017I19Rik, 2400001E08Rik, Lrrc51, LOC667222, Numa1, Il18bp, Rnf121, Trpc2, Art5, Art1, Chrna10, Nup98, Frag1, Rhog, Stim1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129N20.bB6Ng01-129N20.g
ACCDH931338DH931339
length348766
definitionDH931338|Mus musculus domesticus DNA, BAC clone: B6Ng01-129N20, 5' end.DH931339|Mus musculus domesticus DNA, BAC clone: B6Ng01-129N20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(108,375,281 - 108,375,628)(108,487,502 - 108,488,266)
sequence
aagtccatggtgtggcctggtggcacacatctttaatcttagccctcagg
aggcaaaggctggtggatcttagttagaggctagcctgctctacctagca
agtttcaagacagcgaggactacacagagagaccttgactcagggcaaga
aaaaggaaagaaattcaagttgtacaagaagttcaagaccagccttgact
acatgaaacctgtttacaaatgagagggagggaggaaaggagggagagag
agagagggagtgtgtcacaactcaaaacaatatgtataaagcattgtgat
ggtttataatgcagcatatgtttttcacagtagtaataaccagagagg
gaattcaagaatgaactccaacccatacctgtaagacatggctttgagga
agtcctttccctctgcctcgtttgcttttctagtccatgaaagtgtgtga
ctggatcccaccacctaactcgcagcccccagttccagctctgtgctgag
tctaaggaggcagaggtgaatgtgacgcctgggcttcctgtaacttccag
acaaggaaggtgacctaacatgcctgggagggctcagagcagcctggctc
ctcaggggccggtgtggagcagactgcctggagaagctcagtctaggaga
gggatgtttaccaagttcaggggcagtgaggaccaaggcccagagccaga
caagatcacagtttaccggctggctgagcctgtccacctggctcaagttt
ctgtgccatggcatgtgtagcctaacactcaaaaggttccaaatatgcta
gtaccaatggatgatttcagtctgagtcacagaaagtataggatgagcct
gggacatcttactgagctagaaaggaagtactcaaagaacaccttcatgg
gggagataccatgtaagcactgatcatactctttcctgcattctattagg
aaaggcactattgtaacttggcctagtaacattcacaaatcaaccagctt
tctctactgtgaagttatttcctcccacttcatgtgtttggaaccggggg
cctttttgatattaggctatgtacaccatgccagaaacgcgctcagcaac
tcagtacgccatgctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_108375281_108375628
seq2: B6Ng01-129N20.b_56_403

seq1  AAGTCCATGGTGTGGCCTGGTGGCACACATCTTTAATCTTAGCCCTCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCATGGTGTGGCCTGGTGGCACACATCTTTAATCTTAGCCCTCAGG  50

seq1  AGGCAAAGGCTGGTGGATCTTAGTTAGAGGCTAGCCTGCTCTACCTAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAAGGCTGGTGGATCTTAGTTAGAGGCTAGCCTGCTCTACCTAGCA  100

seq1  AGTTTCAAGACAGCGAGGACTACACAGAGAGACCTTGACTCAGGGCAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCAAGACAGCGAGGACTACACAGAGAGACCTTGACTCAGGGCAAGA  150

seq1  AAAAGGAAAGAAATTCAAGTTGTACAAGAAGTTCAAGACCAGCCTTGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAAAGAAATTCAAGTTGTACAAGAAGTTCAAGACCAGCCTTGACT  200

seq1  ACATGAAACCTGTTTACAAATGAGAGGGAGGGAGGAAAGGAGGGAGAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAAACCTGTTTACAAATGAGAGGGAGGGAGGAAAGGAGGGAGAGAG  250

seq1  AGAGAGGGAGTGTGTCACAACACAAAACAATATGTATAAAGCATTGTGAT  300
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AGAGAGGGAGTGTGTCACAACTCAAAACAATATGTATAAAGCATTGTGAT  300

seq1  GGTTTATAATGCAGCATATGTTTTTCACAGTAGTAATAACCAGAGAGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTATAATGCAGCATATGTTTTTCACAGTAGTAATAACCAGAGAGG  348

seq1: chr7_108487502_108488266
seq2: B6Ng01-129N20.g_69_834 (reverse)

seq1  CAGCATGGCGTACTGAGTTGCTGAGCGCGTTTCTGGCATGGTGTACATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATGGCGTACTGAGTTGCTGAGCGCGTTTCTGGCATGGTGTACATAG  50

seq1  CCTAATATTCAAAAGGCCCCCGGTTCCAAACACATGAAGTGGGAGG-AAT  99
      ||||||||  |||||||||||||||||||||||||||||||||||| |||
seq2  CCTAATATCAAAAAGGCCCCCGGTTCCAAACACATGAAGTGGGAGGAAAT  100

seq1  AACTTCACAGTAGAGAAAGCTGGTTGATTTGTGAATGTTACTAGGCCAAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCACAGTAGAGAAAGCTGGTTGATTTGTGAATGTTACTAGGCCAAG  150

seq1  TTACAATAGTGCCTTTCCTAATAGAATGCAGGAAAGAGTATGATCAGTGC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAATAGTGCCTTTCCTAATAGAATGCAGGAAAGAGTATGATCAGTGC  200

seq1  TTACATGGTATCTCCCCCATGAAGGTGTTCTTTGAGTACTTCCTTTCTAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGGTATCTCCCCCATGAAGGTGTTCTTTGAGTACTTCCTTTCTAG  250

seq1  CTCAGTAAGATGTCCCAGGCTCATCCTATACTTTCTGTGACTCAGACTGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTAAGATGTCCCAGGCTCATCCTATACTTTCTGTGACTCAGACTGA  300

seq1  AATCATCCATTGGTACTAGCATATTTGGAACCTTTTGAGTGTTAGGCTAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATCCATTGGTACTAGCATATTTGGAACCTTTTGAGTGTTAGGCTAC  350

seq1  ACATGCCATGGCACAGAAACTTGAGCCAGGTGGACAGGCTCAGCCAGCCG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCCATGGCACAGAAACTTGAGCCAGGTGGACAGGCTCAGCCAGCCG  400

seq1  GTAAACTGTGATCTTGTCTGGCTCTGGGCCTTGGTCCTCACTGCCCCTGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACTGTGATCTTGTCTGGCTCTGGGCCTTGGTCCTCACTGCCCCTGA  450

seq1  ACTTGGTAAACATCCCTCTCCTAGACTGAGCTTCTCCAGGCAGTCTGCTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGTAAACATCCCTCTCCTAGACTGAGCTTCTCCAGGCAGTCTGCTC  500

seq1  CACACCGGCCCCTGAGGAGCCAGGCTGCTCTGAGCCCTCCCAGGCATGTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCGGCCCCTGAGGAGCCAGGCTGCTCTGAGCCCTCCCAGGCATGTT  550

seq1  AGGTCACCTTCCTTGTCTGGAAGTTACAGGAAGCCCAGGCGTCACATTCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCACCTTCCTTGTCTGGAAGTTACAGGAAGCCCAGGCGTCACATTCA  600

seq1  CCTCTGCCTCCTTAGACTCAGCACAGAGCTGGAACTGGGGGCTGCGAGTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGCCTCCTTAGACTCAGCACAGAGCTGGAACTGGGGGCTGCGAGTT  650

seq1  AGGTGGTGGGATCCAGTCACACACTTTCATGGACTAGAAAAGCAAACGAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGTGGGATCCAGTCACACACTTTCATGGACTAGAAAAGCAAACGAG  700

seq1  GCAGAGGGAAAGGACTTCCTCAAAGCCATGTCTTACAGGTATGGGTTGGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGGAAAGGACTTCCTCAAAGCCATGTCTTACAGGTATGGGTTGGA  750

seq1  GTTCATTCTTGAATTC  765
      ||||||||||||||||
seq2  GTTCATTCTTGAATTC  766