BAC Information

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BAC

Clone NameB6Ng01-130I03
Chromosome7 (Build37)
Map Location 133,645,137 - 133,809,299
singlet/doubletdoublet
Overlap geneAtxn2l, Eif3s8, Cln3, Apob48r, Il27, Nupr1, Ccdc101
Upstream geneEG244214, Il4ra, Il21r, Gtf3c1, D430042O09Rik, Gsg1l, Xpo6, Sbk1, LOC100043495, Lat, 2210013K02Rik, Nfatc2ip, Cd19, Rabep2, Atp2a1, Sh2b1, Tufm
Downstream geneSult1a1, LOC629029, Giyd2, Bola2, Coro1a, Snrp1c-ps1, LOC100043044, Mapk3, Gdpd3, Ypel3, Tbx6, Ppp4c, Aldoa, 1500016O10Rik, 4930451I11Rik, Doc2a, Ccdc95, Hirip3, 1110032O16Rik, Kctd13, A830007L07Rik, Sez6l2, D830044I16Rik, Cdipt, Mvp, 2900092E17Rik, Maz, Kif22, 1810010M01Rik, AI467606, Qprt, Spn, Cd2bp2, Tbc1d10b, Mylpf, Sept1, LOC100043580, Zfp553, Zfp771, 2410015N17Rik, Sephs2, Itgal, Zfp768, LOC100043097, LOC100043589, 6430604K15Rik, 9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764, Zfp688, Zfp689, Prr14, Fbs1, 1700008J07Rik, LOC100043597, D030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130I03.bB6Ng01-130I03.g
ACCDH931803DH931804
length1,0691,014
definitionDH931803|Mus musculus domesticus DNA, BAC clone: B6Ng01-130I03, 5' end.DH931804|Mus musculus domesticus DNA, BAC clone: B6Ng01-130I03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(133,645,137 - 133,646,212)(133,808,276 - 133,809,299)
sequence
gaattcaagattttaaaaaagtcaacaaaatattcaataaacaatagctg
tcaaatgttcctaacagtcagtgcaatacaacctgacttcctctaaggga
cagtccttcactcttccgataaaccactgctatagtattaaaccaacagc
acacttcagctgtgaaggcgaaagcccgggcatcccaaacgcagcacctc
tgagcttagacacattacctcccaaaggaaaaaaagctttcaggagcctt
ggattccaaatcccaggagaagtatattctccacaccccaccctttcgcc
ctcattattttcattcagcctgttacccactctgaagggatccccaaacg
ccaggtaacacagctcctcgacggctgatgtaaccggcagttgaggaggg
cgaggagggggccgttggctgggctgggggaccgcgcagccgcaaaaacc
atccaccgggatgcctcgcccggtctgcgcctgcgcactacagcccatcg
cgctccaccacccgctctagaacagaagccactgcgcctgcgtccagtgc
ctctttctatcgcattgacacaccgagaaaaaccgagggcacccactccc
cactcaccgacaccaaacgcccctaaaccctccaaataacccctccctcc
tccgcctctgctctacgtgttaccggggcaagccaatgcccgagtcataa
gacagcatccgcgcgcacgtacgcccggggagcgcgcgcgcaggagcttc
ccagcccgcagtcttcccagtagccgctgcttccgcgcccccgcccaccc
cgtccccctctcactggctacaccgggaagaggagggaacaatccgctcc
caagtccctccctccccattggccaactgtgggccgcgcgccccccccca
ttggctacagtcggggaccccttcatgcagctgactccccatggctgaag
ccggggaccgcgagatccttcttggtaatggagctagggaacccatcacc
tctccaccccccaacaccctttgccgacagagctggcgggatgcgccccg
cctccctcaggcccagacc
gaattctgtggacttccaccttagaaaccaggcttcccatttccaagttg
tatgggttttggcagattttgtattccctccatgattcagcttccttgac
aataaactgggacaacactataaactacaacgaggagtgccttgggaatc
aagtgacgtgaataaatatatgaagtatttgggccagacatggtggtgca
catctacaatctcagtactagggaggcagaaggaggccaagctctgtgag
ttggaggccagcctggtctatatggttagttccaggccaacgctacatgg
tgtgactcagtatcaacaaataaaaaagttaagaaagcacttggaatggt
accaggagcacagccatgctacccagtggtccttgttaccattacaggct
gcatttgtctgtatccatagcaggggagggtcaaacagtttgtagtatct
gatattatcaccacataatcccactgtatgttcacagtccagtagagtta
ttactctgattttaaggacaaggcaacagaaattcagctgcctgcctgcc
aggtcatatgactaggaaattgtatgcgaggacatggcttgctttactgc
catctataaagcaataagctaaagggaaagactgggtaatgaagcaagag
cttgggaaaggtttaagcaatgggagaggatgagcaggaccctcttcaca
gaaagaaggcaagtaggggccatggtctccgagcatatgtggtccagccc
cggaggacagggccagagagcagtagcaccctgaaggtggtactcacttg
cactcggcctccgcatcagtcttggccggttgtgtagaggcctcgaagct
ttgtccggtaataagagaaactataaacaccacgataaggaagtgtgagc
aaaaggaggtggcagatgtggcctgaattcaggatacccgatttcaagct
gaaaggcttgaagccaggcctgaatctagcttataagagttaaacattgc
ttcaggaggtagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_133645137_133646212
seq2: B6Ng01-130I03.b_46_1114

seq1  GAATTCAAGATTTTAAAAAAGTCAACAAAATATTCAATAAACAATAGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGATTTTAAAAAAGTCAACAAAATATTCAATAAACAATAGCTG  50

seq1  TCAAATGTTCCTAACAGTCAGTGCAATACAACCTGACTTCCTCTAAGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGTTCCTAACAGTCAGTGCAATACAACCTGACTTCCTCTAAGGGA  100

seq1  CAGTCCTTCACTCTTCCGATAAACCACTGCTATAGTATTAAACCAACAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCTTCACTCTTCCGATAAACCACTGCTATAGTATTAAACCAACAGC  150

seq1  ACACTTCAGCTGTGAAGGCGAAAGCCCGGGCATCCCAAACGCAGCACCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTCAGCTGTGAAGGCGAAAGCCCGGGCATCCCAAACGCAGCACCTC  200

seq1  TGAGCTTAGACACATTACCTCCCAAAGGAAAAAAAGCTTTCAGGAGCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTTAGACACATTACCTCCCAAAGGAAAAAAAGCTTTCAGGAGCCTT  250

seq1  GGATTCCAAATCCCAGGAGAAGTATATTCTCCACACCCCACCCTTTCGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCCAAATCCCAGGAGAAGTATATTCTCCACACCCCACCCTTTCGCC  300

seq1  CTCATTATTTTCATTCAGCCTGTTACCCACTCTGAAGGGATCCCCAAACG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTATTTTCATTCAGCCTGTTACCCACTCTGAAGGGATCCCCAAACG  350

seq1  CCAGGTAACACAGCTCCTCGACGGCTGATGTAACCGGCAGTTGAGGAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTAACACAGCTCCTCGACGGCTGATGTAACCGGCAGTTGAGGAGGG  400

seq1  CGAGGAGGGGGCCGTTGGCTGGGCTGGGGGACCGCGCAGCCGCAAAAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGAGGGGGCCGTTGGCTGGGCTGGGGGACCGCGCAGCCGCAAAAACC  450

seq1  ATCCACCGGGATGCCTCGCCCGGTCTGCGCCTGCGCACTACAGCCCATCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACCGGGATGCCTCGCCCGGTCTGCGCCTGCGCACTACAGCCCATCG  500

seq1  CGCTCCACCACCCGCTCTAGAACAGAAGCCACTGCGCCTGCGTCCAGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCCACCACCCGCTCTAGAACAGAAGCCACTGCGCCTGCGTCCAGTGC  550

seq1  CTCTTTCTATCGCATTGACACACCGAGAAAAACCGAGGGCACCCACTCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCTATCGCATTGACACACCGAGAAAAACCGAGGGCACCCACTCCC  600

seq1  CACTCACCGACACCAAACGCCCCTAAACCCTCCAAATAACCCCTCCCTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCACCGACACCAAACGCCCCTAAACCCTCCAAATAACCCCTCCCTCC  650

seq1  TCCGCCTCTGCTCTACGTGTTACCGGGGCAAGCCAATGCCCGAGTCATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGCCTCTGCTCTACGTGTTACCGGGGCAAGCCAATGCCCGAGTCATAA  700

seq1  GACAGCATCCGCGCGCACGTACGCCCGGGGAGCGCGCGCGCAGGAGCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCATCCGCGCGCACGTACGCCCGGGGAGCGCGCGCGCAGGAGCTTC  750

seq1  CCAGCCCGCAGTCTTCCCAGTAGCCGCTGCTTCCGCGCCCCCGCCCACCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCCGCAGTCTTCCCAGTAGCCGCTGCTTCCGCGCCCCCGCCCACCC  800

seq1  CGTCCCCCTCTCACTGGCTACACCGGGAAGAGGAGGGAACAATCCGCTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCCCCTCTCACTGGCTACACCGGGAAGAGGAGGGAACAATCCGCTCC  850

seq1  CAAGTCCCTCCCTCCCCATTGGCCAAACTGTGGGCCGCGCGCCCCCCCCC  900
      |||||||||||||||||||||||| |||||||||||||||| ||||||||
seq2  CAAGTCCCTCCCTCCCCATTGGCC-AACTGTGGGCCGCGCG-CCCCCCCC  898

seq1  CATTGGCTACAGTCGGGGACCCCTTCATGCAGCTGACTCCCCATTGGCTG  950
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CATTGGCTACAGTCGGGGACCCCTTCATGCAGCTGACTCCCCA-TGGCTG  947

seq1  AAGCCGGGGACCGCGAGATCCTTCGTGGTAATGGAGCTAGGGACCCCATC  1000
      |||||||||||||||||||||||| |||||||||||||||||| ||||||
seq2  AAGCCGGGGACCGCGAGATCCTTCTTGGTAATGGAGCTAGGGAACCCATC  997

seq1  ACCTCCTCAACCCCCCCAACACCCTTTGCCGACGGAGCTGGCGGGATGCG  1050
      |||||  ||  |||||||||||||||||||||| ||||||||||||||||
seq2  ACCTCTCCA--CCCCCCAACACCCTTTGCCGACAGAGCTGGCGGGATGCG  1045

seq1  CCCCGCCTCCCCTCAGGGCCCAGACC  1076
      |||||||| |||||| ||||||||||
seq2  CCCCGCCT-CCCTCA-GGCCCAGACC  1069

seq1: chr7_133808276_133809299
seq2: B6Ng01-130I03.g_67_1080 (reverse)

seq1  TACTAACCTCCTGGAAGC-ATGTTTAAACTCTTATAAGCCTAGGATCCAG  49
      |||| ||||||| ||||| |||||| |||||||||||| ||| ||| |||
seq2  TACT-ACCTCCT-GAAGCAATGTTT-AACTCTTATAAG-CTA-GATTCAG  45

seq1  GCCCTGGCCTCCAAGCCTCTTCAAGCTTGAATTCGGGTATCCTGGAATCA  99
      | ||||| || ||||||| ||| |||||||| ||||||||||| ||||  
seq2  G-CCTGG-CTTCAAGCCT-TTC-AGCTTGAAATCGGGTATCCT-GAATTC  90

seq1  AGGCCACATACTGCCACCTCCTCTTGCTCACACTTCCTTATCCTTGTGTT  149
      ||||||||| |||||||||||| ||||||||||||||||||| | |||||
seq2  AGGCCACAT-CTGCCACCTCCTTTTGCTCACACTTCCTTATCGTGGTGTT  139

seq1  TATAGTTTCTCCTTATTACCGGACAAAGCTTCGAGGCCTCTACACAACC-  198
      |||||||||| |||||||||||||||||||||||||||||||||||||| 
seq2  TATAGTTTCT-CTTATTACCGGACAAAGCTTCGAGGCCTCTACACAACCG  188

seq1  GCCAAGACTGATGCGGAGGCCGAGTGCAAGTGAGTACCACCTTCAGGGTG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGACTGATGCGGAGGCCGAGTGCAAGTGAGTACCACCTTCAGGGTG  238

seq1  CTACTGCTCTCTGGCCCCTGTCCTCCGGGGCTGGACCACATATGCTCGGA  298
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CTACTGCTCTCTGG-CCCTGTCCTCCGGGGCTGGACCACATATGCTCGGA  287

seq1  GACCATGGCCCCTACTTGCCTTCTTTCTGTGAAGAGGGTCCTGCTCATCC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATGGCCCCTACTTGCCTTCTTTCTGTGAAGAGGGTCCTGCTCATCC  337

seq1  TCTCCCATTGCTTAAACC-TTCCCAAGCTCTTGCTTCATTACCCAGTCTT  397
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCTCCCATTGCTTAAACCTTTCCCAAGCTCTTGCTTCATTACCCAGTCTT  387

seq1  TCCCTTTAGCTTATTGCTTTATAGATGGCAGTAAAGCAAGCCATGTCCTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTAGCTTATTGCTTTATAGATGGCAGTAAAGCAAGCCATGTCCTC  437

seq1  GCATACAATTTCCTAGTCATATGACCTGGCAGGCAGGCAGCTGAATTTCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACAATTTCCTAGTCATATGACCTGGCAGGCAGGCAGCTGAATTTCT  487

seq1  GTTGCCTTGTCCTTAAAATCAGAGTAATAACTCTACTGGACTGTGAACAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCTTGTCCTTAAAATCAGAGTAATAACTCTACTGGACTGTGAACAT  537

seq1  ACAGTGGGATTATGTGGTGATAATATCAGATACTACAAACTGTTTGACCC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGGATTATGTGGTGATAATATCAGATACTACAAACTGTTTGACCC  587

seq1  TCCCCTGCTATGGATACAGACAAATGCAGCCTGTAATGGTAACAAGGACC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTGCTATGGATACAGACAAATGCAGCCTGTAATGGTAACAAGGACC  637

seq1  ACTGGGTAGCATGGCTGTGCTCCTGGTACCATTCCAAGTGCTTTCTTAAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGTAGCATGGCTGTGCTCCTGGTACCATTCCAAGTGCTTTCTTAAC  687

seq1  TTTTTTATTTGTTGATACTGAGTCACACCATGTAGCGTTGGCCTGGAACT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTATTTGTTGATACTGAGTCACACCATGTAGCGTTGGCCTGGAACT  737

seq1  AACCATATAGACCAGGCTGGCCTCCAACTCACAGAGCTTGGCCTCCTTCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATATAGACCAGGCTGGCCTCCAACTCACAGAGCTTGGCCTCCTTCT  787

seq1  GCCTCCCTAGTACTGAGATTGTAGATGTGCACCACCATGTCTGGCCCAAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCCTAGTACTGAGATTGTAGATGTGCACCACCATGTCTGGCCCAAA  837

seq1  TACTTCATATATTTATTCACGTCACTTGATTCCCAAGGCACTCCTCGTTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCATATATTTATTCACGTCACTTGATTCCCAAGGCACTCCTCGTTG  887

seq1  TAGTTTATAGTGTTGTCCCAGTTTATTGTCAAGGAAGCTGAATCATGGAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTATAGTGTTGTCCCAGTTTATTGTCAAGGAAGCTGAATCATGGAG  937

seq1  GGAATACAAAATCTGCCAAAACCCATACAACTTGGAAATGGGAAGCCTGG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATACAAAATCTGCCAAAACCCATACAACTTGGAAATGGGAAGCCTGG  987

seq1  TTTCTAAGGTGGAAGTCCACAGAATTC  1024
      |||||||||||||||||||||||||||
seq2  TTTCTAAGGTGGAAGTCCACAGAATTC  1014