BAC Information

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BAC

Clone NameB6Ng01-130M24
Chromosome7 (Build37)
Map Location 32,359,846 - 32,360,409
singlet/doubletsinglet
Overlap genenone
Upstream geneWbp7, Zbtb32, Upk1a, Cox6b1, Etv2, 3100004P22Rik, 2310022K01Rik, 4930479M11Rik, 2200002J24Rik, EG233075, Atp4a, Tmem147, Gapdhs, Sbsn, Dmkn, Krtdap, Ffar2, Ffar3, Ffar1, Cd22, Mag, Hamp2, Usf2-ps1, Hamp1, Usf2, LOC100043823, Lsr, Tmem162, Fxyd5, Fxyd7, Fxyd1, Lgi4, Fxyd3, Hpn, Scn1b, Gramd1a, LOC672598, LOC100043323, LOC100043827, Apbh, Abpe, LOC100043326, EG384585, LOC100043328, LOC100043331, LOC626181, LOC100043334, LOC100043834
Downstream geneLOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373, EG384589, EG668393, EG330689, LOC100043362, LOC100043365, EG384591
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130M24.bB6Ng01-130M24.g
ACCDH932031DH932032
length1,136962
definitionDH932031|Mus musculus domesticus DNA, BAC clone: B6Ng01-130M24, 5' end.DH932032|Mus musculus domesticus DNA, BAC clone: B6Ng01-130M24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtccggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatattgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttaatcat
acagatcttttcacttccttagttagagtcacgccgagatattttattat
tatttgtgactattgagaagggtgttgttccctaattttcctttcctagg
ctgttttatttctttgtggaagaggaaagggccattggacttgtttgagt
taattttttattcagcctactcaccaaggcttgtattcagttttagggat
tccctgggggaattttttgaggtctctcattaataa
gaattcatattcttctatgtgataacaaccagttgtgccagccccattgg
ttgaaaattttgtctcttttccactggatgattttagcttcattgtcaaa
gattaagtgaccataggtgtgtgggttcatttctgggtcttcagttctat
tccattggtctacttgtctgtcactataccagtaccatgcagtttttatc
acaattactctgtagtacagctttaggtccagtatggtgattccaccaga
gattgtttaatccttgaaatgacttcttgctatcctaggttttttgttat
tccaggtgaatttaagattgttctttctaattcgttgagaactgatttga
aatttgatggggattgcattgaatctgtagattgcttttggcaagagagc
tatttttataatgttgatcctgccaatccatgagcacaacaggtctttcc
attttctgatatcttctttaatttctttcttcagagacttgaagttctta
tcatacagatctttcacttccttacttagagtcacgccaaggtattttat
atttattatatatatattatcagtcttttgggtacaggtactttcacaat
agtctttacttttcaataatgtgcaattacagaatcagccttcttcagaa
ctcataagcagttacccattgaaaacccggtatatgcatcagtgttacaa
aaacaacagaataaattttttcaaattctgaaaaataaaatacatccatg
tgccagattttattttattttatttagtacctgtatgattacctccttgg
taggacctctgctgatgtcaccctccttagatgattctatattgtatcaa
ttgaccacctgaagctgaatatgacaccaccttccatggaatttcatcag
gcacaaaggcaccccaccctcctgttgctttgtaatttaattccttctct
attcacccattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_32359846_32360409
seq2: B6Ng01-130M24.g_462_1031 (reverse)

seq1  AATGGGTTGATTAGAGAAGAAATTAATTGACAACAGCAACAGGA-GGTGG  49
      |||||| ||| |||||||| |||||| | |||| |||||||||| |||||
seq2  AATGGG-TGAATAGAGAAGGAATTAAATTACAA-AGCAACAGGAGGGTGG  48

seq1  GGTGCCTTTGTGCCTGATGAAATTTCATTGGAGGGTGGTGTCATATTCAG  99
      |||||||||||||||||||||||| || |||| |||||||||||||||||
seq2  GGTGCCTTTGTGCCTGATGAAATTCCA-TGGAAGGTGGTGTCATATTCAG  97

seq1  CTTCAGGT-GTCAATTTGATACAATATAGAATCATCTAAGGAGGGTGGAC  148
      |||||||| ||||| ||||||||||||||||||||||||||||||| |||
seq2  CTTCAGGTGGTCAA-TTGATACAATATAGAATCATCTAAGGAGGGT-GAC  145

seq1  ATCAGCAGAGGTCCTACC-AGGA-GTAATCATACAGGTACTAAAATAAAA  196
      |||||||||||||||||| |||| ||||||||||||||||| ||||||||
seq2  ATCAGCAGAGGTCCTACCAAGGAGGTAATCATACAGGTACT-AAATAAAA  194

seq1  TAAAATAAAATCTGGCACATGGATGTATTTTATTTTTCAGAATTTG-AAA  245
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TAAAATAAAATCTGGCACATGGATGTATTTTATTTTTCAGAATTTGAAAA  244

seq1  AATTTATTCTGTTG-TTTTGTAACACTGATGCATATACCGGG-TTTCAAT  293
      |||||||||||||| ||||||||||||||||||||||||||| |||||||
seq2  AATTTATTCTGTTGTTTTTGTAACACTGATGCATATACCGGGTTTTCAAT  294

seq1  GGGTAACTGCTT-TGAGTTCTG-AGAAGGCTGATTCTGTAATTGCACATT  341
      |||||||||||| ||||||||| |||||||||||||||||||||||||||
seq2  GGGTAACTGCTTATGAGTTCTGAAGAAGGCTGATTCTGTAATTGCACATT  344

seq1  ATTG-AAAGT-AAGACTATTGTGAAAGTACCTGTACCCAAAAGACTGATA  389
      |||| ||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAAAGTAAAGACTATTGTGAAAGTACCTGTACCCAAAAGACTGATA  394

seq1  ATATATATATAAT-AATATAAAATACCTTGGCGTGACTCTAAGTAAGGAA  438
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATATATATATAATAAATATAAAATACCTTGGCGTGACTCTAAGTAAGGAA  444

seq1  GTGAAAGATCTGTATGATAAGAACTTCAAGTCTCTGAAGAAAGAAATTAA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAGATCTGTATGATAAGAACTTCAAGTCTCTGAAGAAAGAAATTAA  494

seq1  AGAAGATATCAGAAAATGGAAAGACCTGTTGTGCTCATGGATTGGCAGGA  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATATCAGAAAATGGAAAGACCTGTTGTGCTCATGGATTGGCAGGA  544

seq1  TCAACATTATAAAAATAGCTCTCTTG  564
      ||||||||||||||||||||||||||
seq2  TCAACATTATAAAAATAGCTCTCTTG  570