BAC Information

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BAC

Clone NameB6Ng01-131B05
Chromosome7 (Build37)
Map Location 111,998,826 - 112,105,736
singlet/doubletdoublet
Overlap geneDub1, Olfr665, Olfr666, Olfr667, Olfr668, Olfr669, EG545987
Upstream geneHbb-y, Olfr66, Olfr64, Olfr65, Olfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649, Olfr650-ps1, Trim6, LOC667497, EG667823, Trim12, Trim34, 9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a
Downstream geneOlfr670, Olfr671, Olfr672, GA_x5J8B7W6B6J-189947-189022, Olfr674-ps1, Olfr675, Olfr676, Olfr677, LOC667987, Olfr678, Olfr679, Olfr680-ps1, Olfr681, Olfr682-ps1, Olfr683, Olfr684, Olfr685, Olfr686, EG668035, Olfr688, Olfr689, Olfr690, Olfr691, Olfr692, EG545989, 4632419K20Rik, Cnga4, EG244189, Cckbr, Prkcdbp, Smpd1, Apbb1, Hpxn, Trim3, Arfip2, Fxc1, Dnhd1, LOC100042811, LOC672646, 1500003O22Rik, Ilk, Taf10, Tpp1, Dchs1, Mrpl17, 9130208D14Rik, LOC626055, LOC100042856
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131B05.bB6Ng01-131B05.g
ACCDH932226DH932227
length1,2241,168
definitionDH932226|Mus musculus domesticus DNA, BAC clone: B6Ng01-131B05, 5' end.DH932227|Mus musculus domesticus DNA, BAC clone: B6Ng01-131B05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,104,560 - 112,105,736)(111,998,826 - 111,999,638)
sequence
gaattcactgtctattgctcattagcctttccttgttagtaagatacctt
ttaaattttgtgtctaatttttagaatacagtcagctgtcttacaaattt
ataaagctatttttatggattgctatttttctcagggatttgttttaatt
tcactatctatacagattatcttttcattaatttaatggtaaattcaagg
aattcaaatttttactagctgtgaagtgttttttatgagaattaacattc
ttggtttcctattaaataagtttttcctaaaccaatgccatggaaatgtt
ctttgtaatcttacctttacctttgggctaatgttccacccagaactgat
ttatacattcagtattaaaatgagtaccaattttccttatgagtttctca
gttgagtcaaaaaccatttttcttttgtaagtccatctctgcacagtgtg
tgatacttttgttacagaccaaatgttaccatatagaatagttggctcct
ctacccacttgttagttttctatcccagtgtcaatatctcactcttctaa
agactatactcgaatggtaataaatgatgctttctgatatggctcaaata
ccttatctagttcaaatgaaaatgatggagggtaaagattgtaagataca
gagcaaactaagtcaatcaaagatagaaacaaagtggtgagtgctaggaa
gttttgagtttatttttgttgttgttgctgattttcgccataggttatga
gagttattgaagtttcatgaagtggggatgagacagaaaattgagaaata
aaaaaaaaatcagagacttaaaggcctcactgtctggtcttgacctgatt
cctaaactctctgttctgcaactagaaacttagttcccacttctggtcta
cagtcacagctttcagagttggaagagtcttacccattttcctgggctcc
aaatacttcatatttgatttataggccataatacatcagtgactgtattc
atatctatcatctacaaaattatttcctcacataataggtttccactaca
aagctatcttcactgacaaaaattgatgaacttccactcatgtacattct
ttcgaagttgacaagcatcatttacacagagttcttatttcattgttcag
catggagatctggaatcattggagcctagcatctcaaaggaattgcattc
ttattctcacatgatggccatttc
gaattcatatagatgcatattttatcagcctgcacaaaattcaagtccaa
gtgaatcaaagacctcaacagaaaactgaatacattgaatctgataaaac
agaaagtgggaaatagccttcagttcattggttcagaaggtaatttcttt
aacttaatatcagtggctcaggctataagataacagttgataaaggtaaa
ctcatgaaactacaaaacttctgtaatacaaaggacactgtcaataaaaa
gatattggcatcctacagagtgagaatctgtagtaaacctacatctgaca
gaaggctaatatccaaaataaataaagaacccaagaagttagacacaaac
aatccaaagaacccaatttaaaaatggggtacagagttaaacagaattct
caacaaaggaattttgtaaggccaggaatcactaaaataaaggttcaatg
tttttagttatcacggaaatgcaaatcaaaaggaccctgagattccatcc
tgcaccaataagaatgactaagcaattagtggaatcactaaaatataggc
tataatatcaatgcagaaatggacttgttaccaaggcaaggttaagcagg
caaagagcaaaaatcttcctttttccctgtcgttgtctagtagcaggtat
tgctagattagatctggattcaagatttggattaaaggttggtcttctcc
cttccagatccggattaaggtgtgtcttcctcaaagattcagatcagaag
ttattctccctcttcaatttagaaaaacaaaagaaaacctacaggtgtgc
cctccattttttgctttttagttatcaccagatgtagtcaaattgaccac
caagagtagccatcacagtccccaataatctttgggaaaaaattatccac
ctgaagggaatgctgcttcaggtactttcttactccaccatgaaagctag
ttcagacagattgtatcccacactatcatgtgactgatggctaacacaca
aatgagcagcctgatttcattttaagatcagaagtgagagaccagtacag
ggacctttggaatcccaccaaacccctctctccagtaagagaaaaggtca
tagagcctctcagcacccccaccccctctggaagaagctaatacatcctc
aaaccagggtggggtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_112104560_112105736
seq2: B6Ng01-131B05.b_137_1271 (reverse)

seq1  GAAATGGCCATACCATTGTTGAGAATAAGAAATGCCATCTATTTTTGGAG  50
      |||||||||||  |||   |||||||||| ||||| ||   |  || |||
seq2  GAAATGGCCAT--CAT--GTGAGAATAAG-AATGCAAT---TCCTTTGAG  42

seq1  TAGCTATAGCTACCAAATGAATCTCAGTACTTCAAATGCTG-ACAATGAA  99
        ||||  |||  | ||||| || |||  || |  |||||| |||||| |
seq2  ATGCTA-GGCT--CCAATGATTC-CAGATCTCC--ATGCTGAACAATG-A  85

seq1  AATAAGAACTCTGTGTTAAAATGATGGCTTTTGTCAAACTTCTGGAAAAG  149
      ||||||||||||||||  ||||||||    ||||| ||||||    ||||
seq2  AATAAGAACTCTGTGT--AAATGATG---CTTGTC-AACTTC---GAAAG  126

seq1  AATGTACATTGAAGTGGAAGTTTCATCAATTTTTTTGTCAAGGTTGAAGA  199
      |||||||||   |||||||| ||||||||  |||||||||    ||||||
seq2  AATGTACAT--GAGTGGAAG-TTCATCAA--TTTTTGTCA---GTGAAGA  168

seq1  ATTAGCTTTGTAGTGGGAAACCTATTATTGTTGAGGGAAATTAATTTTGG  249
        |||||||||||| |||||||||||||   |||||  || |||||||| 
seq2  --TAGCTTTGTAGT-GGAAACCTATTAT--GTGAGG--AAATAATTTTG-  210

seq1  TAAGATGATAAGATTATGAATACAGTCACTGATGTATTATGGCCTATAAA  299
        ||||||| ||| ||||||||||||||||||||||||||||||||||||
seq2  -TAGATGAT-AGA-TATGAATACAGTCACTGATGTATTATGGCCTATAAA  257

seq1  TCAAATATGAAGTATTTGGAGCCCAGGAAAATGGGTAAGACTCTTCCAAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATATGAAGTATTTGGAGCCCAGGAAAATGGGTAAGACTCTTCCAAC  307

seq1  TCTGAAAGCTGTGACTGTAGACCAGAAGTGGGAACTAAGTTTCTAGTTGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAGCTGTGACTGTAGACCAGAAGTGGGAACTAAGTTTCTAGTTGC  357

seq1  AGAACAGAGAGTTTAGGAATCAGGTCAAGACCAGACAGTGAGGCCTTTAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGAGAGTTTAGGAATCAGGTCAAGACCAGACAGTGAGGCCTTTAA  407

seq1  GTCTCTGATTTTTTTTTTATTTCTCAATTTTCTGTCTCATCCCCACTTCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGATTTTTTTTTTATTTCTCAATTTTCTGTCTCATCCCCACTTCA  457

seq1  TGAAACTTCAATAACTCTCATAACCTATGGCGAAAATCAGCAACAACAAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTTCAATAACTCTCATAACCTATGGCGAAAATCAGCAACAACAAC  507

seq1  AAAAATAAACTCAAAACTTCCTAGCACTCACCACTTTGTTTCTATCTTTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAACTCAAAACTTCCTAGCACTCACCACTTTGTTTCTATCTTTG  557

seq1  ATTGACTTAGTTTGCTCTGTATCTTACAATCTTTACCCTCCATCATTTTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACTTAGTTTGCTCTGTATCTTACAATCTTTACCCTCCATCATTTTC  607

seq1  ATTTGAACTAGATAAGGTATTTGAGCCATATCAGAAAGCATCATTTATTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAACTAGATAAGGTATTTGAGCCATATCAGAAAGCATCATTTATTA  657

seq1  CCATTCGAGTATAGTCTTTAGAAGAGTGAGATATTGACACTGGGATAGAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCGAGTATAGTCTTTAGAAGAGTGAGATATTGACACTGGGATAGAA  707

seq1  AACTAACAAGTGGGTAGAGGAGCCAACTATTCTATATGGTAACATTTGGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAACAAGTGGGTAGAGGAGCCAACTATTCTATATGGTAACATTTGGT  757

seq1  CTGTAACAAAAGTATCACACACTGTGCAGAGATGGACTTACAAAAGAAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAACAAAAGTATCACACACTGTGCAGAGATGGACTTACAAAAGAAAA  807

seq1  ATGGTTTTTGACTCAACTGAGAAACTCATAAGGAAAATTGGTACTCATTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTTTGACTCAACTGAGAAACTCATAAGGAAAATTGGTACTCATTT  857

seq1  TAATACTGAATGTATAAATCAGTTCTGGGTGGAACATTAGCCCAAAGGTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACTGAATGTATAAATCAGTTCTGGGTGGAACATTAGCCCAAAGGTA  907

seq1  AAGGTAAGATTACAAAGAACATTTCCATGGCATTGGTTTAGGAAAAACTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAAGATTACAAAGAACATTTCCATGGCATTGGTTTAGGAAAAACTT  957

seq1  ATTTAATAGGAAACCAAGAATGTTAATTCTCATAAAAAACACTTCACAGC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATAGGAAACCAAGAATGTTAATTCTCATAAAAAACACTTCACAGC  1007

seq1  TAGTAAAAATTTGAATTCCTTGAATTTACCATTAAATTAATGAAAAGATA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAAAATTTGAATTCCTTGAATTTACCATTAAATTAATGAAAAGATA  1057

seq1  ATCTGTATAGATAGTGAAATTAAAACAAATCCCTGAGAAAAATAGCAATC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTATAGATAGTGAAATTAAAACAAATCCCTGAGAAAAATAGCAATC  1107

seq1  CATAAAAATAGCTTTATAAATTTGTAAG  1177
      ||||||||||||||||||||||||||||
seq2  CATAAAAATAGCTTTATAAATTTGTAAG  1135

seq1: chr7_111998826_111999638
seq2: B6Ng01-131B05.g_437_1234

seq1  AAAATGGGGTACAGAGTTAAACAGAATTCTCAACAAAGGAATTTTGTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGGGTACAGAGTTAAACAGAATTCTCAACAAAGGAATTTTGTAAG  50

seq1  GCCAGGAATCACTAAAATAAAGGTTCAATGTTTTTAGTTATCACGGAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGAATCACTAAAATAAAGGTTCAATGTTTTTAGTTATCACGGAAAT  100

seq1  GCAAATCAAAAGGACCCTGAGATTCCATCCTGCACCAATAAGAATGACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATCAAAAGGACCCTGAGATTCCATCCTGCACCAATAAGAATGACTA  150

seq1  AGCAATTAGTGGAATCACTAAAATATAGGCTATAATATCAATGCAGAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATTAGTGGAATCACTAAAATATAGGCTATAATATCAATGCAGAAAT  200

seq1  GGACTTGTTACCAAGGCAAGGTTAAGCAGGCAAAGAGCAAAAATCTTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTGTTACCAAGGCAAGGTTAAGCAGGCAAAGAGCAAAAATCTTCCT  250

seq1  TTTTCCCTGTCGTTGTCTAGTAGCAGGTATTGCTAGATTAGATCTGGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCTGTCGTTGTCTAGTAGCAGGTATTGCTAGATTAGATCTGGATT  300

seq1  CAAGATTTGGATTAAAGGTTGGTCTTCTCCCTTCCAGATCCGGATTAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATTTGGATTAAAGGTTGGTCTTCTCCCTTCCAGATCCGGATTAAGG  350

seq1  TGTGTCTTCCTCAAAGATTCAGATCAGAAGTTATTCTCCCTCTTCAATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTTCCTCAAAGATTCAGATCAGAAGTTATTCTCCCTCTTCAATTT  400

seq1  AGAAAAACAAAAGAAAACCTACAGGTGTGCCCTCCATTTTTTGCTTTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAACAAAAGAAAACCTACAGGTGTGCCCTCCATTTTTTGCTTTTTA  450

seq1  GTTATCACCAGATGTAGTCAAATTGACCACCAAGAGTAGCCATCACAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCACCAGATGTAGTCAAATTGACCACCAAGAGTAGCCATCACAGTC  500

seq1  CCCAATAATCTTTGGAAAAAAATTATCCACCTGAAGGGAATGCTGCTTCA  550
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CCCAATAATCTTTGGGAAAAAATTATCCACCTGAAGGGAATGCTGCTTCA  550

seq1  GGGTACTTTCTTACTCCACCATGAAAGCTAGTTCAAGAACAGAATTGTAT  600
       ||||||||||||||||||||||||||||||||||   |||| |||||||
seq2  -GGTACTTTCTTACTCCACCATGAAAGCTAGTTCA--GACAG-ATTGTAT  596

seq1  CCCACACTATCATGTGAACTGATGGCTAACACACAAATGAGCAAGCCTGA  650
      |||||||||||||||| ||||||||||||||||||||||||| |||||||
seq2  CCCACACTATCATGTG-ACTGATGGCTAACACACAAATGAGC-AGCCTGA  644

seq1  TTTCATTTTAAGATCAGAAGTGAAGAGACCAGTACA-GGACCTTTGGAAA  699
      |||||||||||||||||||||| ||||||||||||| ||||||||||  |
seq2  TTTCATTTTAAGATCAGAAGTG-AGAGACCAGTACAGGGACCTTTGG--A  691

seq1  ATCCCACCAGACCCCTCCTCTCCAGGAAGAG-AAAGGTCATAGAG-CACT  747
      ||||||||| |||||| |||||||| ||||| ||||||||||||| | ||
seq2  ATCCCACCAAACCCCT-CTCTCCAGTAAGAGAAAAGGTCATAGAGCCTCT  740

seq1  CAGGCACCCCCACCCCCTCTGGAAGGGAAAGGCTAATTACATTCCTCAGA  797
      || ||||||||||||||||||||||    | ||||| |||| |||||| |
seq2  CA-GCACCCCCACCCCCTCTGGAAG----AAGCTAA-TACA-TCCTCAAA  783

seq1  CCACAGGGT-GGGTGGG  813
      |  |||||| |||||||
seq2  C--CAGGGTGGGGTGGG  798