BAC Information

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BAC

Clone NameB6Ng01-131C14
Chromosome7 (Build37)
Map Location 28,622,340 - 28,623,451
singlet/doubletsinglet
Overlap gene4933426I21Rik
Upstream geneCyp2a5, EG233005, EG330491, Cyp2a12, LOC100043199, Cyp2f2, Gm1450, Egln2, Rab4b, Mia1, Snrpa, Itpkc, Adck4, Numbl, Ltbp4, Shkbp1, Spnb4, Blvrb, EG668045, Sertad3, Sertad1, Prx, Hipk4, Pld3, 2310022A10Rik, Akt2, Ttc9b, Map3k10, C030039L03Rik, Zfp60, LOC100043229, LOC100043233
Downstream geneZfp59, 4732475C15Rik, Prkcz2, 1700049G17Rik, EG668175, LOC100043771, Zfp780b, C130069I09Rik, LOC100043772, Psmc4, LOC100043774, 9530053A07Rik, Fbl, Dyrk1b, Eid2, LOC434156, BC089491, Dll3, Timm50, Supt5h, Rps16, Plekhg2, Zfp36, Ixl, Paf1, Samd4b, 1700085B13Rik, Gmfg, Lrfn1, LOC624672, 1700028B04Rik, EG330496, Il28, Sycn, 1190020J12Rik, Pak4, C330005M16Rik, Fbxo27, Fbxo17, Mrps12, Sars2, EG624918, Nfkbib, Sirt2, 5830482F20Rik, Hnrpl, Ech1, Lgals4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131C14.bB6Ng01-131C14.g
ACCDH932291DH932292
length1,2611,106
definitionDH932291|Mus musculus domesticus DNA, BAC clone: B6Ng01-131C14, 5' end.DH932292|Mus musculus domesticus DNA, BAC clone: B6Ng01-131C14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagttctgtctcctttatttgtcctcaacacttaaacatctttca
gaatacatgatcacacggtaaaaagctcaccacaagtttacacataaatt
caaaccataaattgaataagaagtttacaacagagaatgtttgcatgtat
atccatttgcattaattatctggctaattattcaacagttaaaaagttaa
agaccataattttgtgactaagttattaatgaagttctgcacaaataaac
tcagtcaatatgtccttgcacctatagtaaatcctctttatgaccgttgg
ttgatggatttacaacctcttggaatgtgctctgaggtgtggatgcctgc
ttctatctcagaaacaattaacttgtgacactaaagactggcagacttct
cactgaggttttgattatcagagaggacctaatagcagtcctattgtaaa
agaacttaataattactaatataattttaggaatcgttatagaatcatca
ctaggaattaagaaatcatctatttgtctatatagcatcactgcaaaata
gtatatcttcataattttcagaaatttgctcaaaaggatgggcaaatacc
tattgacagttatatatatttaataataacaggtgaagcatatcaatagc
aggaatctttcctcagatatcttgcgcacgctcgactggccaggaagaat
gacgctgcaacaggatccttctgcacacgtttattgggagagcttgattg
tagaggcgaaaagacctcgagcccagaactggtgctgcttttataggcct
aggaggggcgtgtctcacacccggattggttatgcactaagcctcatttg
catgttcctcatctgattggctactctctctcagtaccttacaaaacctc
attatcatacctcatttgcatgtctcacatctgattggttatactctcag
taccttacagaacttcattatcatgcctgggccagcagtgtctttgcaaa
aactttactgcataatatatcacattgttgttgtccatcttatgctgtgg
gcaaagtagtcagtgcactctgcaacgcacatgtgggcttccccatctcc
cctgtttgttttaataaatgaggttggacatagcctgccatatgtccatc
caccgggcctcgttttagcgttctcttatgtaagcctataccgctaagta
acaacgcacgtctagtctagttgactggaccaagaagtaccgctcctgta
atacgaccgag
gaattccctgctttagatagaaaatgtgactgaggaccgtatcgctatgt
accaacagaactgtgtccgttaggcaggctagacgagcctcttaataaaa
ctaatcgcattaaaagtactgtaaatcgtctaaacgccaaaatttgccac
atttagatttgaaaagtcagacccagctatgtgttaactacagaaaatat
attaaagataaatactctagcagattcaaagtaaccatcttcgcatgatc
aaaagaaaactcaggtcgattataaaatggaggtagattaataaagaggc
caagtcatcaagtgacagtaaacatgggcgtggtagcaatggcttttatc
ccagcgatggggaggcacagccagctgcatgtctgtgagaagagaccacc
gaggactacccagtgaaaccctgtctaagaactaaaatacactcagatta
tggtggcacatgcctttagtcaccgccctaaggaggcagaggaggtgtct
gaaaaaaattaattaaaaataaactcagaatacactcctactgtcttgaa
aggactaaataaactaaaattcagaggataccccaaatgtctcaaacaaa
taagtacataaatacataaacaaaattaactcagagtatactcaaatagc
acacctttaaacatgaagaggggggaagtcccgctagaacaatagggaat
gatagcaaaatcaatcaacacattcaaatgttgtcaatttaaaaaactga
tagaacaacaccctccaagagcaacagagcatagctgatttggacagcat
ctcaactctgagtgaagtcaataaaatggagacacttaagctctaatgac
acgaggggatctggaaagggaactgttcctgtacgctcacctgtgggaga
aacgctcattacctgaagatgttctgtggaaagctttctcttttatcctt
ttttcttggcggggcatctattacttctatatttgtattgcacttttaaa
tataaagactcatctattttgagttatcccacgagcagattacttgaggt
aggcaaggagtctcagacgaaccaagtgactggctctggcaaagcttggg
gtttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_28622340_28623451
seq2: B6Ng01-131C14.g_70_1175 (reverse)

seq1  ACAAAACCCAAGCTTTG-CAGAAGCAGTCACTTGGGTCTGTCTGGAGACT  49
      ||||| ||||||||||| ||||  ||||||||||| || |||| ||||||
seq2  ACAAACCCCAAGCTTTGCCAGAGCCAGTCACTTGGTTC-GTCT-GAGACT  48

seq1  CCTTGCCTACCTC-AGTAATCTGCTCGTGGGATAACTCAAAATAGATGGA  98
      ||||||||||||| ||||||||||||||||||||||||||||||||| ||
seq2  CCTTGCCTACCTCAAGTAATCTGCTCGTGGGATAACTCAAAATAGAT-GA  97

seq1  GTCTTTAATATTTAAAAGTGCAATACAAAATATATGAAGTAATAGATGCC  148
      |||||| ||||||||||||||||||| ||||||| |||||||||||||||
seq2  GTCTTT-ATATTTAAAAGTGCAATAC-AAATATA-GAAGTAATAGATGCC  144

seq1  CCGCCAAGAAAAAAGGATAAAAGAGAAAGCTTTCCACAGCAACATCTTCA  198
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CCGCCAAGAAAAAAGGATAAAAGAGAAAGCTTTCCACAG-AACATCTTCA  193

seq1  GGTAATGAGCGTTTCTCCCACAGGTGAGCGTACAGGAACAGTTCCCTTTC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATGAGCGTTTCTCCCACAGGTGAGCGTACAGGAACAGTTCCCTTTC  243

seq1  CAGATCCCCTCGTGTCATTAGAGCTTAAGTGTCTCCATTTTTATTGACTT  298
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CAGATCCCCTCGTGTCATTAGAGCTTAAGTGTCTCCA-TTTTATTGACTT  292

seq1  CACTCAGAGTTGAGATGCTGTCCAAATCAGCTATGCTCTGTTGCTCTTGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAGAGTTGAGATGCTGTCCAAATCAGCTATGCTCTGTTGCTCTTGG  342

seq1  AGGGTGTTGTTCTATCAGTTTTTTAAATTGACAACATTTGAATGTGTTGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGTTGTTCTATCAGTTTTTTAAATTGACAACATTTGAATGTGTTGA  392

seq1  TTGATTTTGCTATCATTCCCTATTGTTCTAGCGGGACTTCCCCCCTCTTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTGCTATCATTCCCTATTGTTCTAGCGGGACTTCCCCCCTCTTC  442

seq1  ATGTTTAAAGGTGTGCTATTTGAGTATACTCTGAGTTAATTTTGTTTATG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTAAAGGTGTGCTATTTGAGTATACTCTGAGTTAATTTTGTTTATG  492

seq1  TATTTATGTACTTATTTGTTTGAGACATTTGGGGTATCCTCTGAATTTTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATGTACTTATTTGTTTGAGACATTTGGGGTATCCTCTGAATTTTA  542

seq1  GTTTATTTAGTCCTTTCAAGACAGTAGGAGTGTATTCTGAGTTTATTTTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTTAGTCCTTTCAAGACAGTAGGAGTGTATTCTGAGTTTATTTTT  592

seq1  AATTAATTTTTTTCAGACACCTCCTCTGCCTCCTTAGGGCGGTGACTAAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATTTTTTTCAGACACCTCCTCTGCCTCCTTAGGGCGGTGACTAAA  642

seq1  GGCATGTGCCACCATAATCTGAGTGTATTTTAGTTCTTAGACAGGGTTTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGTGCCACCATAATCTGAGTGTATTTTAGTTCTTAGACAGGGTTTC  692

seq1  ACTGGGTAGTCCTCGGTGGTCTCTTCTCACAGACATGCAGCTGGCTGTGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGTAGTCCTCGGTGGTCTCTTCTCACAGACATGCAGCTGGCTGTGC  742

seq1  CTCCCCATCGCTGGGATAAAAGCCATTGCTACCACGCCCATGTTTACTGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCATCGCTGGGATAAAAGCCATTGCTACCACGCCCATGTTTACTGT  792

seq1  CACTTGATGACTTGGCCTCTTTATTAATCTACCTCCATTTTATAATCGAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGATGACTTGGCCTCTTTATTAATCTACCTCCATTTTATAATCGAC  842

seq1  CTGAGTTTTCTTTTGATCATGCGAAGATGGTTACTTTGAATCTGCTAGAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTTTCTTTTGATCATGCGAAGATGGTTACTTTGAATCTGCTAGAG  892

seq1  TATTTATCTTTAATATATTTTCTGTAGTTAACACATAGCTGGGTCTGACT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATCTTTAATATATTTTCTGTAGTTAACACATAGCTGGGTCTGACT  942

seq1  TTTCAAATCTAAATGTGGCAAATTTTGGCGTTTAGACGATTTACAGTACT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAATCTAAATGTGGCAAATTTTGGCGTTTAGACGATTTACAGTACT  992

seq1  TTTAATGCGATTAGTTTTATTAAGAGGCTCGTCTAGCCTGCCTAACGGAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGCGATTAGTTTTATTAAGAGGCTCGTCTAGCCTGCCTAACGGAC  1042

seq1  ACAGTTCTGTTGGTACATAGCGATACGGTCCTCAGTCACATTTTCTATCT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTCTGTTGGTACATAGCGATACGGTCCTCAGTCACATTTTCTATCT  1092

seq1  AAAGCAGGGAATTC  1112
      ||||||||||||||
seq2  AAAGCAGGGAATTC  1106