BAC Information

Click to search

BAC

Clone NameB6Ng01-131C19
Chromosome7 (Build37)
Map Location 32,335,797 - 32,336,911
singlet/doubletsinglet
Overlap genenone
Upstream geneBC053749, Hspb6, 1810054G18Rik, Psenen, U2af1l4, Tmem149, Wbp7, Zbtb32, Upk1a, Cox6b1, Etv2, 3100004P22Rik, 2310022K01Rik, 4930479M11Rik, 2200002J24Rik, EG233075, Atp4a, Tmem147, Gapdhs, Sbsn, Dmkn, Krtdap, Ffar2, Ffar3, Ffar1, Cd22, Mag, Hamp2, Usf2-ps1, Hamp1, Usf2, LOC100043823, Lsr, Tmem162, Fxyd5, Fxyd7, Fxyd1, Lgi4, Fxyd3, Hpn, Scn1b, Gramd1a, LOC672598, LOC100043323, LOC100043827, Apbh, Abpe, LOC100043326, EG384585, LOC100043328, LOC100043331, LOC626181, LOC100043334, LOC100043834
Downstream geneLOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373, EG384589, EG668393, EG330689, LOC100043362, LOC100043365, EG384591
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131C19.bB6Ng01-131C19.g
ACCDH932299DH932300
length1,2401,103
definitionDH932299|Mus musculus domesticus DNA, BAC clone: B6Ng01-131C19, 5' end.DH932300|Mus musculus domesticus DNA, BAC clone: B6Ng01-131C19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggtataccgaatggctgagaatcacctgaataaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacatcagtcagaatggctaaaataataaattcaggtaatatc
agatgctggcgaggatgtggaaaaagaggagcattcctccattgttagtg
ggattgcaagcttgtacaaccactctggaaaccagtctgtggttcctcag
agaattagacattgtactaccagaggatcgagcaatatctcttctgggca
tatacccagaagatggtccaatggatgataggaagacatgctccactaag
ttcaaagcagccttatatataataccagaagctgaaagaacccagatgtc
cctcaacagaggaatggacacagaacatattgaaattttacacagtggaa
tactactcagctattaaaatcagtgaattcatgaaattcctaggtaaatg
gatggatctggagggtatcatcctgactgagttaacccattcacaaaaga
actcaaatgatatgcactcactgataaatggatatttgtccagaaattta
gaacatccaagatacaatgtgcaaaatacatgaaacacaagaagaaggaa
gaccaatatgtggatgtttcatccccccctcccttataatggggaacaaa
atacccatggaataagttacagagacaaagtttgtagctgagaccaaagg
atgggccatcaagagactgccccaaccggggatccctctcataatcagca
aacaaacacagactctattgtatatgccagcaagattttgctgaaagacc
cctgacatagctgtctcttgttaggctatgtcagagccttgctaatacag
aagtgcttgctcacagtcatgtattggatggaacactgggcccacaatga
agaagctagagaaaatacccagagatgaaggagtctgcaaccctataggt
ggaacacatatgaactaacagtaccccagagcttgtgactctagctgcat
atgtagcagaagatgctagtcagccatcatgggaggaaaggcttgtcttg
caagtttatatggctgccgtaacaggaacaccaagcaaaagagactgggt
gtagaagagatacggaagattggacttggcatactgaattaatgaaagtt
ctataaatgaacaatatacagtgaagatccaccctttcga
gaattctgtggtagcaaagatcagctggacacactggcacagatcgactg
aagctgagccttcaggagcttgggaatccagctaagacttgactataatt
tttacagggtagctgtggaatattgaaaatggccatcatgcaggcttttt
gatcagtagtcagaatagctagagcaggaatgcatagtctggcagtgatc
aattaggaggccaggtagctcagaactgaaatatccttgcttaattatga
gaaaatgagcacaaggcacttgaagtgagaacttaatgaacacactaatg
atgtttattaacagggtcttcctgtgtaattttgggtagcctagaactct
ttttgtagaccagactgacatctaactcacaaagataggaagcctcttcc
ttcaaaatactaagatcaaaggtgagaattatcatacctgctcattgttt
acagattttgacaatgacttccaccagccccaaagaaagttgaatctaca
acacatacacataaacagacagacagacagacccacagacagacagacag
acccacagacagacagacagacagacagaagacagaaaggcaggcaggca
ggaccacacaatcatttctcaggaaggttatgaggtcaagaccaaccagg
gcaagatcttctttaaaaacaacaacaacaacaacaacaacaacaacaac
aacaaaaaactacaaaacaaacaaacaaagaaacaaacaaagagaaaacc
tcaagaatgggtttaagaagtcaagttcaggcggaagtaaaagttagaga
atgctaagagaccatagtcactacattagagtgtctctcaccctcatcga
cagggtgcacagggcacatacatgacctcccagattaactcccaggaaca
tggatctgagtaggaccaggaataccaaggttctgttgagaccgcacagg
ctctagatagcagaatctgtccctgctccctagtgtttggtacatgatcc
agttgtgcgtgtctgtgtgtcacagtgtgtccacgtagaaaaaaataaag
tacctatttcaaagctgttgtgagcttcctgctcctcagtgaacaaattc
agc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_32335797_32336911
seq2: B6Ng01-131C19.g_68_1170

seq1  GAATTCTGTGGTAGCAAAGATCAGCTGGACACACTGGCACAGATCGACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGGTAGCAAAGATCAGCTGGACACACTGGCACAGATCGACTG  50

seq1  AAGCTGAGCCTTCAGGAGCTTGGGAATCCAGCTAAGACTTGACTATAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGAGCCTTCAGGAGCTTGGGAATCCAGCTAAGACTTGACTATAATT  100

seq1  TTTACAGGGTAGCTGTGGAATATTGAAAATGGCCATCATGCAGGCTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAGGGTAGCTGTGGAATATTGAAAATGGCCATCATGCAGGCTTTTT  150

seq1  GATCAGTAGTCAGAATAGCTAGAGCAGGAATGCATAGTCTGGCAGTGATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGTAGTCAGAATAGCTAGAGCAGGAATGCATAGTCTGGCAGTGATC  200

seq1  AATTAGGAGGCCAGGTAGCTCAGAACTGAAATATCCTTGCTTAATTATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGGAGGCCAGGTAGCTCAGAACTGAAATATCCTTGCTTAATTATGA  250

seq1  GAAAATGAGCACAAGGCACTTGAAGTGAGAACTTAATGAACACACTAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGAGCACAAGGCACTTGAAGTGAGAACTTAATGAACACACTAATG  300

seq1  ATGTTTATTAACAGGGTCTTCCTGTGTAATTTTGGGTAGCCTAGAACTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTATTAACAGGGTCTTCCTGTGTAATTTTGGGTAGCCTAGAACTCT  350

seq1  TTTTGTAGACCAGACTGACATCTAACTCACAAAGATAGGAAGCCTCTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTAGACCAGACTGACATCTAACTCACAAAGATAGGAAGCCTCTTCC  400

seq1  TTCAAAATACTAAGATCAAAGGTGAGAATTATCATACCTGCTCATTGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAATACTAAGATCAAAGGTGAGAATTATCATACCTGCTCATTGTTT  450

seq1  ACAGATTTTGACAATGACTTCCACCAGCCCCAAAGAAAGTTGAATCTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATTTTGACAATGACTTCCACCAGCCCCAAAGAAAGTTGAATCTACA  500

seq1  ACACATACACATAAACAGACAGACAGACAGACCCACAGACAGACAGACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATACACATAAACAGACAGACAGACAGACCCACAGACAGACAGACAG  550

seq1  ACCCACAGACAGACAGACAGACAGACAGAAGACAGAAAGGCAGGCAGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACAGACAGACAGACAGACAGACAGAAGACAGAAAGGCAGGCAGGCA  600

seq1  GGACCACACAATCATTTCTCAGGAAGGTTATGAGGTCAAGACCAACCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCACACAATCATTTCTCAGGAAGGTTATGAGGTCAAGACCAACCAGG  650

seq1  GCAAGATCTTCTTTAAAAACAACAACAACAACAACAACAACAACAACAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGATCTTCTTTAAAAACAACAACAACAACAACAACAACAACAACAAC  700

seq1  AACAAAAAACTACAAAAC-AACAAACAAAGAAACAAACAAAGAGAAAACC  749
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AACAAAAAACTACAAAACAAACAAACAAAGAAACAAACAAAGAGAAAACC  750

seq1  TCAAGAATGGGTTTAAGAAGTCAAGTTCAGGCGGAAGTAAAAGTTAGAGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAATGGGTTTAAGAAGTCAAGTTCAGGCGGAAGTAAAAGTTAGAGA  800

seq1  ATGCTAAGAGACCATAGTCACTACATTAGAGTGTCTCTCACCCTCATCGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAAGAGACCATAGTCACTACATTAGAGTGTCTCTCACCCTCATCGA  850

seq1  CAGGGTGCACAGGGCACATACATGACCTCCCAGATTGAACTCCCCAGGAA  899
      |||||||||||||||||||||||||||||||||||| |||| ||||||||
seq2  CAGGGTGCACAGGGCACATACATGACCTCCCAGATT-AACT-CCCAGGAA  898

seq1  CATGGATCTGAGTAGGACCAGGAATACCAAGGTTCTGTTGAGAACCGCAC  949
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CATGGATCTGAGTAGGACCAGGAATACCAAGGTTCTGTTGAG-ACCGCAC  947

seq1  AGGCTCTAGATAGCAGAATCTGTCCCTGCTCCCTAGTGTTTGGTACATGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCTAGATAGCAGAATCTGTCCCTGCTCCCTAGTGTTTGGTACATGA  997

seq1  TCCAGTTGTGCGTGTCTGTGTGTCACAGTGTGTCCCACGTAGAAAATAAA  1049
      ||||||||||||||||||||||||||||||||| |||||||||||  |||
seq2  TCCAGTTGTGCGTGTCTGTGTGTCACAGTGTGT-CCACGTAGAAA--AAA  1044

seq1  ATAAAAGTACCTATTTCAAAGGCTGTTGTGAGGCTTCCTGCTCCTCACAG  1099
      || ||||||||||||||||| |||||||||| |||||||||||||  |||
seq2  AT-AAAGTACCTATTTCAAA-GCTGTTGTGA-GCTTCCTGCTCCT--CAG  1089

seq1  TGAACAGAATTTCAGC  1115
      |||||  || ||||||
seq2  TGAAC--AAATTCAGC  1103