BAC Information

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BAC

Clone NameB6Ng01-131L05
Chromosome7 (Build37)
Map Location 94,930,576 - 95,007,285
singlet/doubletdoublet
Overlap geneGrm5
Upstream geneEG546983, Vmn2r-ps87, LOC637896, EG621430, LOC621477, Nox4, Tyr
Downstream geneCtsc, LOC100039756, Rab38, LOC100039924, LOC666598, EG621562
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131L05.bB6Ng01-131L05.g
ACCDH932690DH932691
length1,098237
definitionDH932690|Mus musculus domesticus DNA, BAC clone: B6Ng01-131L05, 5' end.DH932691|Mus musculus domesticus DNA, BAC clone: B6Ng01-131L05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,930,576 - 94,931,569)(95,007,049 - 95,007,285)
sequence
gaattctccatttagctttgtaccccatttttaaaatttggtgatttgaa
tttttttgaggttagcatcatgagttgtttgtatattttagatattagtc
ctctactgtatgtaatgtatgtaattagtgaagatatttttcccaattta
tgggttgctgatttttcctcttgactgtatcttttgccttacagaagctt
ttcattctcatgaggtcccatttagcagttgttgatcttaaaacctgaaa
cattggagttttgtttaggaaatttccccctgtgccaatgagtttgaggc
tttttcccagtttttcctatatttgattcagtgtgtttgggtttatgttg
aggtccttaattcacttggatttgaggtgcaaggtgatgaatgtggatct
attttcatttttctacatacagactgccaattgaaccagaactatttatt
gactacagataaatagtgattaaaaaaaaactacatggtattgttacaga
aacagacaggtcaactaatggaataggattgaagacccagaaataagcca
acatactatggacatctttaacaaagaaaacaaaaacaaacaacggaaga
aagaaatcatcttcaacaaatttcaatatttacacaagaattagaatagt
gaaatgaaacatcacttcatttttgatgttctaatcactatttctaggtg
gaccagcaactcaatttttatgtctggggagttatggcttcatttctttg
cagaaaacatttcacatttgcttacacattaattatgttcacagatgaaa
accatttgattttagatatccagaaacataatagaaaatgtttgttttct
gcagtgcaccctgaaatttttcaggcattgtgtctttcaggccctctatt
gttattcctcaaatacatcattcctcaataataaagttccaattataaca
tgtttaaatctagaactgatgaaactatattagaaactaacaatgtgaac
atctttttacatgtcatttacatttgtgcagtcagaatcttcatgtgtca
acatctggaacaaatattttaggtgactttaaggagtacagacttttt
catttctccttacagaaagatagaaaaaccaagtagaaagcaaacagata
aagcctgttaacagataaagggctgtccatttaggaaatgttaaaccctg
atcacaaattgcagatgtttaaccagtatctccatggtataatcttcact
gataaggttatattgagaaataattgaccaaatctaatatctctctctct
ctctctctctctctctctctctctctctctctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_94930576_94931569
seq2: B6Ng01-131L05.b_164_1139

seq1  AATTAGTGAAGATATTTTTCCCAATTTATGGGTTGCTGATTTTTCCTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGTGAAGATATTTTTCCCAATTTATGGGTTGCTGATTTTTCCTCTT  50

seq1  GACTGTATCTTTTGCCTTACAGAAGCTTTTCATTCTCATGAGGTCCCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTATCTTTTGCCTTACAGAAGCTTTTCATTCTCATGAGGTCCCATT  100

seq1  TAGCAGTTGTTGATCTTAAAACCTGAAACATTGGAGTTTTGTTTAGGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGTTGTTGATCTTAAAACCTGAAACATTGGAGTTTTGTTTAGGAAA  150

seq1  TTTCCCCCTGTGCCAATGAGTTTGAGGCTTTTTCCCAGTTTTTCCTATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCCTGTGCCAATGAGTTTGAGGCTTTTTCCCAGTTTTTCCTATAT  200

seq1  TTGATTCAGTGTGTTTGGGTTTATGTTGAGGTCCTTAATTCACTTGGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTCAGTGTGTTTGGGTTTATGTTGAGGTCCTTAATTCACTTGGATT  250

seq1  TGAGGTGCAAGGTGATGAATGTGGATCTATTTTCATTTTTCTACATACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTGCAAGGTGATGAATGTGGATCTATTTTCATTTTTCTACATACAG  300

seq1  ACTGCCAATTGAACCAGAACTATTTATTGACTACAGATAAATAGTGATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCAATTGAACCAGAACTATTTATTGACTACAGATAAATAGTGATTA  350

seq1  AAAAAAAACTACATGGTATTGTTACAGAAACAGACAGGTCAACTAATGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAACTACATGGTATTGTTACAGAAACAGACAGGTCAACTAATGGA  400

seq1  ATAGGATTGAAGACCCAGAAATAAGCCAACATACTATGGACATCTTTAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGATTGAAGACCCAGAAATAAGCCAACATACTATGGACATCTTTAAC  450

seq1  AAAGAAAACAAAAACAAACAACGGAAGAAAGAAATCATCTTCAACAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAACAAAAACAAACAACGGAAGAAAGAAATCATCTTCAACAAATT  500

seq1  TCAATATTTACACAAGAATTAGAATAGTGAAATGAAACATCACTTCATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATATTTACACAAGAATTAGAATAGTGAAATGAAACATCACTTCATTT  550

seq1  TTGATGTTCTAATCACTATTTCTAGGTGGACCAGCAACTCAATTTTTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGTTCTAATCACTATTTCTAGGTGGACCAGCAACTCAATTTTTATG  600

seq1  TCTGGGGAGTTATGGCTTCATTTCTTTGCAGAAAACATTTCACATTTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGGAGTTATGGCTTCATTTCTTTGCAGAAAACATTTCACATTTGCT  650

seq1  TACACATTAATTATGTTCACAGATGAAAACCATTTGATTTTAGATATCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATTAATTATGTTCACAGATGAAAACCATTTGATTTTAGATATCCA  700

seq1  GAAACATAATAGAAAATGTTTGTTTTCTGCAGTGCACCCTGAAATTTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATAATAGAAAATGTTTGTTTTCTGCAGTGCACCCTGAAATTTTTC  750

seq1  AGGCATTGTGTCTTTCAGGGCCCTCTATTGTTATTCCTCAAATACATCAT  800
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGGCATTGTGTCTTTCA-GGCCCTCTATTGTTATTCCTCAAATACATCAT  799

seq1  TCCTCAAATAAATAAAGTTCCAATTATAACATGTTTTAAAATCTAGAACT  850
      |||||||   ||||||||||||||||||||||||||  ||||||||||||
seq2  TCCTCAA--TAATAAAGTTCCAATTATAACATGTTT--AAATCTAGAACT  845

seq1  GATGAAACTAATATTTAGAAACTAACAATGTTGAACATCTTTTTACATGT  900
      ||||||||| ||| |||||||||||||||| |||||||||||||||||||
seq2  GATGAAACT-ATA-TTAGAAACTAACAATG-TGAACATCTTTTTACATGT  892

seq1  CATTTACCATTTGTGCCAGTCAGAATCTTCATTGTGTCCAAACATCTGAG  950
      |||||| |||||||| ||||||||||||||| ||||||  ||||||||  
seq2  CATTTA-CATTTGTG-CAGTCAGAATCTTCA-TGTGTC--AACATCTGGA  937

seq1  ACAAATATTTTAAGGTGACTTTAAAGAAGTTAACAAGACTTTTT  994
      ||||||||||| |||||||||| ||| |||  || |||||||||
seq2  ACAAATATTTT-AGGTGACTTT-AAGGAGT--AC-AGACTTTTT  976

seq1: chr7_95007049_95007285
seq2: B6Ng01-131L05.g_75_311 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATA  50

seq1  TTAGATTTGGTCAATTATTTCTCAATATAACCTTATCAGTGAAGATTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATTTGGTCAATTATTTCTCAATATAACCTTATCAGTGAAGATTATA  100

seq1  CCATGGAGATACTGGTTAAACATCTGCAATTTGTGATCAGGGTTTAACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGAGATACTGGTTAAACATCTGCAATTTGTGATCAGGGTTTAACAT  150

seq1  TTCCTAAATGGACAGCCCTTTATCTGTTAACAGGCTTTATCTGTTTGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAAATGGACAGCCCTTTATCTGTTAACAGGCTTTATCTGTTTGCTT  200

seq1  TCTACTTGGTTTTTCTATCTTTCTGTAAGGAGAAATG  237
      |||||||||||||||||||||||||||||||||||||
seq2  TCTACTTGGTTTTTCTATCTTTCTGTAAGGAGAAATG  237