BAC Information

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BAC

Clone NameB6Ng01-132A19
Chromosome7 (Build37)
Map Location 110,049,186 - 110,146,374
singlet/doubletdoublet
Overlap geneOlfr570, Olfr571, Olfr572, Olfr573-ps1, Olfr574, Olfr575, Olfr576, Olfr577, Olfr578
Upstream geneF930017I19Rik, 2400001E08Rik, Lrrc51, LOC667222, Numa1, Il18bp, Rnf121, Trpc2, Art5, Art1, Chrna10, Nup98, Frag1, Rhog, Stim1, Rrm1, Olfr543, Olfr544, Olfr545, LOC667284, Olfr547, Olfr548-ps1, Olfr549, Trim21, LOC384699, Olfr550, Olfr551, Olfr552, Olfr553, Olfr554, LOC100040840, Olfr555, Olfr556, Trim68, Olfr557, Olfr558, Olfr33, Olfr559, Olfr78, Olfr560, Olfr561, Olfr562-ps1, Olfr563-ps1, Olfr564, Olfr565-ps1, Olfr566, GA_x5J8B7W5P47-379997-380552, Olfr567-ps1, Olfr568, Olfr569
Downstream geneOlfr1527-ps1, Olfr579-ps1, Olfr580-ps1, Olfr581-ps1, Olfr582, Olfr583, Olfr584, Olfr585, Olfr586, Olfr587-ps1, Olfr588-ps1, Olfr589, Olfr590-ps1, Olfr591, Olfr592, Olfr593, Olfr594, Olfr595-ps1, Usp17, Dub2a, LOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666, Olfr598, Olfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609, Olfr610, Olfr611, EG545985, Olfr614, Olfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69, Olfr68, Olfr67, Hbb-b1, EG436003, Hbb-bh1, Hbb-y, Olfr66, Olfr64, Olfr65, Olfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132A19.bB6Ng01-132A19.g
ACCDH932956DH932957
length1,162909
definitionDH932956|Mus musculus domesticus DNA, BAC clone: B6Ng01-132A19, 5' end.DH932957|Mus musculus domesticus DNA, BAC clone: B6Ng01-132A19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,049,186 - 110,050,357)(110,145,466 - 110,146,374)
sequence
gaattcttcatccatggattcacagacatggaatcttcagtgctcctcat
tatgtcctttgatcgctttgtagccattcggcaccccctaagatacagtg
ccatcctcacaagctccagggttgtgcaaattgggctagccttttctgtt
aaaagcattctcctggtgcttccccttccattcactttaaagagactcag
atactgcaataaacgcctcttgtcacactcctattgtctccaccaggatg
tcatgaagctggcgtgctctgacaacagggttaacttttactatgggctg
ttcgttgcactctgcatgatgtcagacagtgtgttcattgctgtgtctta
cgtgttcatcttgaagacagtgttgggtattgcatcccatggggagaggc
tcaaagctcttaatacttgtgtatcccatatctgtgctgtgctcattttc
tatgtccctatcattaccttagctaccatgcatcgctttgcaaaacataa
atctccattagctatgattctgatagcagatgctttcttgctggtaccac
ctttgatgaatcccattgtgtattgtgttaaaactaggcagataagagta
aaagttttagaaaaactgggtctgcattctaagtaattggaacaatgtta
ttagaagttgcattttctgtacaataggctactttagagagacagcagtg
tttcatcctcaaaggagattattccatttacctcatagacctatagtttg
ttacaatcaatctgtactattgcttttctgttttgaagaaggaagaagct
tcatattttacagaacctctatgaaatcgttaattgttatttggatggtt
gaagacatctatccctaggtacaaaattgaacaataagaatttgcacaat
cttctaaagaaaatctaggagatgtggtttccattgtgtctgggagaagc
ccaaaagacaccagactgtttacatctctgtatttgtctcttattttgat
attctatatgttgcataaaccctttaccacatgtctgagttgtttgagtc
tgttctttgctgtcactgttgcaatacaggtgtcacctgagcatgctgag
aacatgaaatttgcagatcagacactgtcgagctgggagtcagtactctc
tatactgacatc
gaattctctttccttcctcccaatcctcccttgtatctctccttactctc
tttcaaaatcttgacctctttttttttaatagttgttacaaatatacgta
aatatctacacagacagcaggaacgaaggcttcccccagggaagagcaca
ccaactggctatccaaaatcaaatgaaaacatgtacacaattttaacaac
tatagattgtcagcatatttagatataaattttaaactaatggaattatt
gtttattactattaacaaaagttattttattattcaccgtttccctatgt
aggccaatcaggactcagaatctcttgcctttccctcctgatgctagagt
ttccagtgtgcaccattatcaacaccttcatggttatcttaagaataaca
aatggccatgctgcagttgctcattttatttgtctctgattaaaagttaa
tttatgcttacatgtgtatacactatgttttagaactttttacttatgta
ttttaagttgataaacatatatctgaagaatacatccctttttgattgaa
aagaaaattagtaaaattagtctcttctctctctctctctctctctcaag
tttaaaatgctcatcccaaatcttcatatctccccctctactactccaca
taagcatttttaatgttcactaactttattggaaagatacacatttttac
aacatagacaaatactttttgtggctcattcatgtactctctaataattt
aactctttttccaatacctcattaaatatctacatgtctgtttcagacaa
tcacaaaaatatccttttatttttattttattatttatttactttaaaga
tcatatttttaaagtgtatatatatatatatatatatatatatatataga
aagagagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_110049186_110050357
seq2: B6Ng01-132A19.b_46_1207

seq1  GAATTCTTCATCCATGGATTCACAGACATGGAATCTTCAGTGCTCCTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCATCCATGGATTCACAGACATGGAATCTTCAGTGCTCCTCAT  50

seq1  TATGTCCTTTGATCGCTTTGTAGCCATTCGGCACCCCCTAAGATACAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCCTTTGATCGCTTTGTAGCCATTCGGCACCCCCTAAGATACAGTG  100

seq1  CCATCCTCACAAGCTCCAGGGTTGTGCAAATTGGGCTAGCCTTTTCTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCTCACAAGCTCCAGGGTTGTGCAAATTGGGCTAGCCTTTTCTGTT  150

seq1  AAAAGCATTCTCCTGGTGCTTCCCCTTCCATTCACTTTAAAGAGACTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCATTCTCCTGGTGCTTCCCCTTCCATTCACTTTAAAGAGACTCAG  200

seq1  ATACTGCAATAAACGCCTCTTGTCACACTCCTATTGTCTCCACCAGGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGCAATAAACGCCTCTTGTCACACTCCTATTGTCTCCACCAGGATG  250

seq1  TCATGAAGCTGGCGTGCTCTGACAACAGGGTTAACTTTTACTATGGGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAAGCTGGCGTGCTCTGACAACAGGGTTAACTTTTACTATGGGCTG  300

seq1  TTCGTTGCACTCTGCATGATGTCAGACAGTGTGTTCATTGCTGTGTCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTTGCACTCTGCATGATGTCAGACAGTGTGTTCATTGCTGTGTCTTA  350

seq1  CGTGTTCATCTTGAAGACAGTGTTGGGTATTGCATCCCATGGGGAGAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTTCATCTTGAAGACAGTGTTGGGTATTGCATCCCATGGGGAGAGGC  400

seq1  TCAAAGCTCTTAATACTTGTGTATCCCATATCTGTGCTGTGCTCATTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGCTCTTAATACTTGTGTATCCCATATCTGTGCTGTGCTCATTTTC  450

seq1  TATGTCCCTATCATTACCTTAGCTACCATGCATCGCTTTGCAAAACATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCCCTATCATTACCTTAGCTACCATGCATCGCTTTGCAAAACATAA  500

seq1  ATCTCCATTAGCTATGATTCTGATAGCAGATGCTTTCTTGCTGGTACCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCATTAGCTATGATTCTGATAGCAGATGCTTTCTTGCTGGTACCAC  550

seq1  CTTTGATGAATCCCATTGTGTATTGTGTTAAAACTAGGCAGATAAGAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGATGAATCCCATTGTGTATTGTGTTAAAACTAGGCAGATAAGAGTA  600

seq1  AAAGTTTTAGAAAAACTGGGTCTGCATTCTAAGTAATTGGAACAATGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTTAGAAAAACTGGGTCTGCATTCTAAGTAATTGGAACAATGTTA  650

seq1  TTAGAAGTTGCATTTTCTGTACAATAGGCTACTTTAGAGAGACAGCAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAGTTGCATTTTCTGTACAATAGGCTACTTTAGAGAGACAGCAGTG  700

seq1  TTTCATCCTCAAAGGAGATTATTCCATTTACCTCATAGACCTATAGTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCCTCAAAGGAGATTATTCCATTTACCTCATAGACCTATAGTTTG  750

seq1  TTACAATCAATCTGTACTATTGCTTTTCTGTTTTGAAGAAGGAAGAAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAATCAATCTGTACTATTGCTTTTCTGTTTTGAAGAAGGAAGAAGCT  800

seq1  TCATATTTTACAGAACCTCTATGAAATCGTTAATTGTTATTTGGATGGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTTTACAGAACCTCTATGAAATCGTTAATTGTTATTTGGATGGTT  850

seq1  GAAGACATCTATCCCTAGGTACAAAATTGAACAATAAGAATTTGCACAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACATCTATCCCTAGGTACAAAATTGAACAATAAGAATTTGCACAAT  900

seq1  CTTCTAAAGAAAATCTAGGAGATGTGGTTTTCCATTGTGTCTGGGAGAAG  950
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTTCTAAAGAAAATCTAGGAGATGTGG-TTTCCATTGTGTCTGGGAGAAG  949

seq1  CCCAAAAGACACCAGAACTGTTTAACATCTCTGTATTTGTCTCTTATTTT  1000
      ||||||||||||||| ||||||| ||||||||||||||||||||||||||
seq2  CCCAAAAGACACCAG-ACTGTTT-ACATCTCTGTATTTGTCTCTTATTTT  997

seq1  GATATTCTATATGTTGCATTAAACCCTTTACCACATGTCTGAGTTTGTCT  1050
      |||||||||||||||||| |||||||||||||||||||||||| |||| |
seq2  GATATTCTATATGTTGCA-TAAACCCTTTACCACATGTCTGAG-TTGTTT  1045

seq1  GAGTCTGTTCTTTGCTGTTCACTGTTGCAATACAGGTGTCACCCTGAGCA  1100
      ||||||||||||||||| ||||||||||||||||||||||| ||||||||
seq2  GAGTCTGTTCTTTGCTG-TCACTGTTGCAATACAGGTGTCA-CCTGAGCA  1093

seq1  TTGCTGAGACCATGACA-TTGCAGAATCAG-CACTGCTGTAAGCTTGTGA  1148
       |||||||| ||||| | |||||| ||||| |||||  |  ||| || ||
seq2  -TGCTGAGAACATGAAATTTGCAG-ATCAGACACTGTCG--AGC-TGGGA  1138

seq1  GTCAGTACTC-CTATTACTGACATC  1172
      |||||||||| ||| ||||||||||
seq2  GTCAGTACTCTCTA-TACTGACATC  1162

seq1: chr7_110145466_110146374
seq2: B6Ng01-132A19.g_66_974 (reverse)

seq1  CTCTCTCTTTCTATATATATATATATATATATATATATATATACACTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTTTCTATATATATATATATATATATATATATATATACACTTTA  50

seq1  AAAATATGATCTTTAAAGTAAATAAATAATAAAATAAAAATAAAAGGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATGATCTTTAAAGTAAATAAATAATAAAATAAAAATAAAAGGATA  100

seq1  TTTTTGTGATTGTCTGAAACAGACATGTAGATATTTAATGAGGTATTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTGATTGTCTGAAACAGACATGTAGATATTTAATGAGGTATTGGA  150

seq1  AAAAGAGTTAAATTATTAGAGAGTACATGAATGAGCCACAAAAAGTATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGTTAAATTATTAGAGAGTACATGAATGAGCCACAAAAAGTATTT  200

seq1  GTCTATGTTGTAAAAATGTGTATCTTTCCAATAAAGTTAGTGAACATTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATGTTGTAAAAATGTGTATCTTTCCAATAAAGTTAGTGAACATTAA  250

seq1  AAATGCTTATGTGGAGTAGTAGAGGGGGAGATATGAAGATTTGGGATGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTTATGTGGAGTAGTAGAGGGGGAGATATGAAGATTTGGGATGAG  300

seq1  CATTTTAAACTTGAGAGAGAGAGAGAGAGAGAGAAGAGACTAATTTTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAAACTTGAGAGAGAGAGAGAGAGAGAGAAGAGACTAATTTTACT  350

seq1  AATTTTCTTTTCAATCAAAAAGGGATGTATTCTTCAGATATATGTTTATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCTTTTCAATCAAAAAGGGATGTATTCTTCAGATATATGTTTATC  400

seq1  AACTTAAAATACATAAGTAAAAAGTTCTAAAACATAGTGTATACACATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAAAATACATAAGTAAAAAGTTCTAAAACATAGTGTATACACATGT  450

seq1  AAGCATAAATTAACTTTTAATCAGAGACAAATAAAATGAGCAACTGCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATAAATTAACTTTTAATCAGAGACAAATAAAATGAGCAACTGCAGC  500

seq1  ATGGCCATTTGTTATTCTTAAGATAACCATGAAGGTGTTGATAATGGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCATTTGTTATTCTTAAGATAACCATGAAGGTGTTGATAATGGTGC  550

seq1  ACACTGGAAACTCTAGCATCAGGAGGGAAAGGCAAGAGATTCTGAGTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGGAAACTCTAGCATCAGGAGGGAAAGGCAAGAGATTCTGAGTCCT  600

seq1  GATTGGCCTACATAGGGAAACGGTGAATAATAAAATAACTTTTGTTAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGCCTACATAGGGAAACGGTGAATAATAAAATAACTTTTGTTAATA  650

seq1  GTAATAAACAATAATTCCATTAGTTTAAAATTTATATCTAAATATGCTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAAACAATAATTCCATTAGTTTAAAATTTATATCTAAATATGCTGA  700

seq1  CAATCTATAGTTGTTAAAATTGTGTACATGTTTTCATTTGATTTTGGATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTATAGTTGTTAAAATTGTGTACATGTTTTCATTTGATTTTGGATA  750

seq1  GCCAGTTGGTGTGCTCTTCCCTGGGGGAAGCCTTCGTTCCTGCTGTCTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTTGGTGTGCTCTTCCCTGGGGGAAGCCTTCGTTCCTGCTGTCTGT  800

seq1  GTAGATATTTACGTATATTTGTAACAACTATTAAAAAAAAAGAGGTCAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATATTTACGTATATTTGTAACAACTATTAAAAAAAAAGAGGTCAAG  850

seq1  ATTTTGAAAGAGAGTAAGGAGAGATACAAGGGAGGATTGGGAGGAAGGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGAAAGAGAGTAAGGAGAGATACAAGGGAGGATTGGGAGGAAGGAA  900

seq1  AGAGAATTC  909
      |||||||||
seq2  AGAGAATTC  909