BAC Information

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BAC

Clone NameB6Ng01-132J07
Chromosome7 (Build37)
Map Location 96,475,212 - 96,632,718
singlet/doubletdoublet
Overlap geneTmem135, Fzd4
Upstream geneLOC100039756, Rab38, LOC100039924, LOC666598, EG621562, LOC100039969
Downstream genePrss23, LOC100040001, Me3, Ccdc81, l7Rn6, Eed, E230029C05Rik, EG384719, 2310010J17Rik, Picalm, Ccdc83, Sytl2, Ccdc89, Crebzf, Tmem126a, Tmem126b, B230218P12Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132J07.bB6Ng01-132J07.g
ACCDH933348DH933349
length1,120993
definitionDH933348|Mus musculus domesticus DNA, BAC clone: B6Ng01-132J07, 5' end.DH933349|Mus musculus domesticus DNA, BAC clone: B6Ng01-132J07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(96,631,562 - 96,632,718)(96,475,212 - 96,476,005)
sequence
gaattctgtagttttgaagacttcctagaactgaagccagtcagctgagt
tcagagatactgtgctccaagagaaagaaaaaaactccaaatgccggctg
gaactcctctgtactcaagataactttcaagccaatggataaacaagagc
tttgggcgggtccttgatctgtgaaaataaatatgtgctttgtcaaaggc
ctgagggcacagcctccacccacctattctctggggctggggctggggag
gctgagccttctgccttcccccacagagtgtcgaggatgtcagtttagag
gaggctctctgctgccagcactgtggcagtactcaactctcacatctaca
tatcccccagtgtgtcaaccaatacttatgatgtacccactatgtcccaa
acaattagatagatgtggacataaatgtccaaatttcccaaatggggcat
ctatgcatatttagggaagggagattctaaattacaaatccctaagtaaa
agatttattctatggtgcagctgcaatggccagtcttcataaaagcacac
cattgttaaacacttttctaagcccctccatctaagttaaatcatcccta
acttaagagatgtgaaacttgacatgtaaaaagtaagcctaagttattgt
ccaaggtcagcttgactgctggaggaaaactcacttgaacaaatgtcagt
gttgctctagcatctgtgtggtcagaggcaaatcgccaacctccctgcct
ctccatttcctcatctataaaatgagacagtggtgtttaatttgaagtgt
ctcaccaggttcatgatgcctacagatagggtgaaactttgcttctgggt
gtgtctgtgtttgcagaacatttggttatataggccaggcagtggagcat
aggacacccatcttcagtgtgagctgcacatctatatctagtgggatggg
gaaaggagcagagagagtgggtgcttgctagtcttcagtgagagtccacc
tttttgtgactgctctcagctcagctcagcttcttctgtcttcaacctca
gactgtgctcagcctgagactctagctgagctaatagagtacatcactgg
tcccgatgagcctaggcttt
gaattcctaatgaccacacaaaaataatgtttagaaacattcaggattta
aaggccttctaagctccttttaatcaaataaatacatgttttattgagaa
tctgctggctccagaacagaagggaggatactatcttatcatctagaata
tggattcaaatccatgttacttcatccctgacctatggagcggctggggg
aacctgagccacctacactctgtagctgataagggaaaggctggattgag
aaagcgtttactgcaatagcaggctctcaactctcaactacaagtgatct
gttggcagtcgtactttgctctcaacagatcagaaaaaagaataacaaga
agtcatccaggaaaacaaggtcaagggactcaaactggaatgttaataaa
tacgctcattatttaaaaaaaaaaaaaaagacattgctacttttacaaat
gaacagtaacaaagcaagaagaggcatcattgacttaataagtcattcac
ttacactacataaatgagacctcaagtgaagtcaatttatgactccatga
tctcctagggtcagataagcaagacagtttttagcagtttgcattattta
atgattttcaaagattcttaattagctttgtttttaattttttaaagaac
ctcttaaaaaataatgtgataacacacttttaataccagatacaaacgtg
catttctgtgggttcaaatccaatgtgaattacacagagagttataagcc
agccagggatacatacgaaaaccctgtctgggggggggggggggaaaggc
gatgaatataataataggataactttataattacaataggaaaaatagaa
ttgaggactaaaaccatgctgtaaattctacaattgaaactgcattatat
atatttattaggaagcagtgatttcaagggagattggaaagcatgagata
cgtacttgcagaggtagcacagggaaatattcagatccatatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_96631562_96632718
seq2: B6Ng01-132J07.b_42_1161 (reverse)

seq1  AAAGCCTAGTGCTTCCAAACCGGGGGACCAGTGATGTACCTCCTGATTTA  50
      ||||||||| |||      |   ||||||||||||||| |||    | | 
seq2  AAAGCCTAG-GCT------CATCGGGACCAGTGATGTA-CTC----TATT  38

seq1  AGGCCTCAGGCTTAGAGTCTCCAGGGCTCTGAGGGCCACAAGTTCTTGAG  100
      ||  |||||   |||||||| ||||   |||||   ||| |||   ||||
seq2  AG--CTCAG--CTAGAGTCT-CAGG---CTGAG---CAC-AGT--CTGAG  74

seq1  TGTGAAGACAGAAGAAGCTGGAGCCTGAGGCCTGAGAGCAGTCACAAAAA  150
        ||||||||||||||||| ||| |||||  |||||||||||||||||||
seq2  GTTGAAGACAGAAGAAGCT-GAG-CTGAG--CTGAGAGCAGTCACAAAAA  120

seq1  GGTGGACTCTCACTGAAGACCAAGCAAGGCACCCACTCTCTTCTGCCTTC  200
      ||||||||||||||||||| | ||||| |||||||||||| |||||  ||
seq2  GGTGGACTCTCACTGAAGA-CTAGCAA-GCACCCACTCTC-TCTGC--TC  165

seq1  CTTTCCCCATCCCACTAGATAATAGAATGGTGCAGCTCACACTG-AGATG  249
      |||||||||||||||||||| |||||   ||||||||||||||| |||||
seq2  CTTTCCCCATCCCACTAGAT-ATAGA--TGTGCAGCTCACACTGAAGATG  212

seq1  GGTGTCCTATGCTCCACTGCCTGGCCTATATAACCAAATGTTCTGCAAAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCCTATGCTCCACTGCCTGGCCTATATAACCAAATGTTCTGCAAAC  262

seq1  ACAGACACACCCAGAAGCAAAGTTTCACCCTATCTGTAGGCATCCTGAAC  349
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ACAGACACACCCAGAAGCAAAGTTTCACCCTATCTGTAGGCATCATGAAC  312

seq1  CTGGTGAGACACTTCAAATTAAACACCACTGTCTCATTTTATAGATGAGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGAGACACTTCAAATTAAACACCACTGTCTCATTTTATAGATGAGG  362

seq1  AAATGGAGAGGCAGGGAGGTTGGCGATTTGCCTCTGACCACACAGATGCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGAGAGGCAGGGAGGTTGGCGATTTGCCTCTGACCACACAGATGCT  412

seq1  AGAGCAACACTGACATTTGTTCAAGTGAGTTTTCCTCCAGCAGTCAAGCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAACACTGACATTTGTTCAAGTGAGTTTTCCTCCAGCAGTCAAGCT  462

seq1  GACCTTGGACAATAACTTAGGCTTACTTTTTACATGTCAAGTTTCACATC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTGGACAATAACTTAGGCTTACTTTTTACATGTCAAGTTTCACATC  512

seq1  TCTTAAGTTAGGGATGATTTAACTTAGATGGAGGGGCTTAGAAAAGTGTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAGTTAGGGATGATTTAACTTAGATGGAGGGGCTTAGAAAAGTGTT  562

seq1  TAACAATGGTGTGCTTTTATGAAGACTGGCCATTGCAGCTGCACCATAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAATGGTGTGCTTTTATGAAGACTGGCCATTGCAGCTGCACCATAGA  612

seq1  ATAAATCTTTTACTTAGGGATTTGTAATTTAGAATCTCCCTTCCCTAAAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCTTTTACTTAGGGATTTGTAATTTAGAATCTCCCTTCCCTAAAT  662

seq1  ATGCATAGATGCCCCATTTGGGAAATTTGGACATTTATGTCCACATCTAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATAGATGCCCCATTTGGGAAATTTGGACATTTATGTCCACATCTAT  712

seq1  CTAATTGTTTGGGACATAGTGGGTACATCATAAGTATTGGTTGACACACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTGTTTGGGACATAGTGGGTACATCATAAGTATTGGTTGACACACT  762

seq1  GGGGGATATGTAGATGTGAGAGTTGAGTACTGCCACAGTGCTGGCAGCAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGATATGTAGATGTGAGAGTTGAGTACTGCCACAGTGCTGGCAGCAG  812

seq1  AGAGCCTCCTCTAAACTGACATCCTCGACACTCTGTGGGGGAAGGCAGAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCTCCTCTAAACTGACATCCTCGACACTCTGTGGGGGAAGGCAGAA  862

seq1  GGCTCAGCCTCCCCAGCCCCAGCCCCAGAGAATAGGTGGGTGGAGGCTGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCAGCCTCCCCAGCCCCAGCCCCAGAGAATAGGTGGGTGGAGGCTGT  912

seq1  GCCCTCAGGCCTTTGACAAAGCACATATTTATTTTCACAGATCAAGGACC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCAGGCCTTTGACAAAGCACATATTTATTTTCACAGATCAAGGACC  962

seq1  CGCCCAAAGCTCTTGTTTATCCATTGGCTTGAAAGTTATCTTGAGTACAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCAAAGCTCTTGTTTATCCATTGGCTTGAAAGTTATCTTGAGTACAG  1012

seq1  AGGAGTTCCAGCCGGCATTTGGAGTTTTTTTCTTTCTCTTGGAGCACAGT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTTCCAGCCGGCATTTGGAGTTTTTTTCTTTCTCTTGGAGCACAGT  1062

seq1  ATCTCTGAACTCAGCTGACTGGCTTCAGTTCTAGGAAGTCTTCAAAACTA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGAACTCAGCTGACTGGCTTCAGTTCTAGGAAGTCTTCAAAACTA  1112

seq1  CAGAATTC  1157
      ||||||||
seq2  CAGAATTC  1120

seq1: chr7_96475212_96476005
seq2: B6Ng01-132J07.g_67_860

seq1  GAATTCCTAATGACCACACAAAAATAATGTTTAGAAACATTCAGGATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAATGACCACACAAAAATAATGTTTAGAAACATTCAGGATTTA  50

seq1  AAGGCCTTCTAAGCTCCTTTTAATCAAATAAATACATGTTTTATTGAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCTTCTAAGCTCCTTTTAATCAAATAAATACATGTTTTATTGAGAA  100

seq1  TCTGCTGGCTCCAGAACAGAAGGGAGGATACTATCTTATCATCTAGAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGGCTCCAGAACAGAAGGGAGGATACTATCTTATCATCTAGAATA  150

seq1  TGGATTCAAATCCATGTTACTTCATCCCTGACCTATGGAGCGGCTGGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTCAAATCCATGTTACTTCATCCCTGACCTATGGAGCGGCTGGGGG  200

seq1  AACCTGAGCCACCTACACTCTGTAGCTGATAAGGGAAAGGCTGGATTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGAGCCACCTACACTCTGTAGCTGATAAGGGAAAGGCTGGATTGAG  250

seq1  AAAGCGTTTACTGCAATAGCAGGCTCTCAACTCTCAACTACAAGTGATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCGTTTACTGCAATAGCAGGCTCTCAACTCTCAACTACAAGTGATCT  300

seq1  GTTGGCAGTCGTACTTTGCTCTCAACAGATCAGAAAAAAGAATAACAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCAGTCGTACTTTGCTCTCAACAGATCAGAAAAAAGAATAACAAGA  350

seq1  AGTCATCCAGGAAAACAAGGTCAAGGGACTCAAACTGGAATGTTAATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATCCAGGAAAACAAGGTCAAGGGACTCAAACTGGAATGTTAATAAA  400

seq1  TACGCTCATTATTTAAAAAAAAAAAAAAAGACATTGCTACTTTTACAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGCTCATTATTTAAAAAAAAAAAAAAAGACATTGCTACTTTTACAAAT  450

seq1  GAACAGTAACAAAGCAAGAAGAGGCATCATTGACTTAATAAGTCATTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGTAACAAAGCAAGAAGAGGCATCATTGACTTAATAAGTCATTCAC  500

seq1  TTACACTACATAAATGAGACCTCAAGTGAAGTCAATTTATGACTCCATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACTACATAAATGAGACCTCAAGTGAAGTCAATTTATGACTCCATGA  550

seq1  TCTCCTAGGGTCAGATAAGCAAGACAGTTTTTAGCAGTTTGCATTATTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTAGGGTCAGATAAGCAAGACAGTTTTTAGCAGTTTGCATTATTTA  600

seq1  ATGATTTTCAAAGATTCTTAATTAGCTTTGTTTTTAATTTTTTAAAGAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTTCAAAGATTCTTAATTAGCTTTGTTTTTAATTTTTTAAAGAAC  650

seq1  CTCTTAAAAAATAATGTGATAACACACTTTTAATACCAGATACAAACGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAAAAAATAATGTGATAACACACTTTTAATACCAGATACAAACGTG  700

seq1  CATTTCTGTGGGTTCAAATCCAATGTGAATTACACAGAGAGTTATAAGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTGTGGGTTCAAATCCAATGTGAATTACACAGAGAGTTATAAGCC  750

seq1  AGCCAGGGATACATACGAAAACCCTGTCTGGGGGGGGGGGGGGG  794
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGGATACATACGAAAACCCTGTCTGGGGGGGGGGGGGGG  794