BAC Information

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BAC

Clone NameB6Ng01-134A21
Chromosome7 (Build37)
Map Location 3,192,917 - 3,194,013
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041028, LOC627003, EG664817, Speer9-ps1, AU018091, LOC100041503
Downstream geneNlrp12, GA_x5J8B7W3939-136239-135295, LOC384710, Myadm, Prkcc, Cacng7, LOC672553, Cacng8, Cacng6, LOC100041095, 9930022N03Rik, LOC100041109, Oscar, Ndufa3, Tfpt, Prpf31, Cnot3, Leng1, Tmc4, Leng4, Tsen34, Rps9, Lilrb3, Pira1, LOC100041137, LOC100041146, Pira2, LOC675749, LOC100038908, LOC100038909, Pira11, Pira3, LOC100041186, LOC664841, Lair1, Ttyh1, Leng8, Leng9, Cdc42ep5, LOC384521, EG232801
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134A21.bB6Ng01-134A21.g
ACCDH934447DH934448
length1,0931,148
definitionDH934447|Mus musculus domesticus DNA, BAC clone: B6Ng01-134A21, 5' end.DH934448|Mus musculus domesticus DNA, BAC clone: B6Ng01-134A21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgaccccctggaaatgctgctgagcacgttttttgtgaagact
tgtctctaaagagcatagattttgctcttgcctctcttttgcctctttcc
ccaccttgctccccctctctccacgtggtcatggctgacctctcctctct
ctctctctctctctctctctctctctctctctccctttctctgcctctac
tactctactactcttttttaactcccctccccatgccctaaataaactct
attctatgctaaaaaaaagaaaagaagcatagatttttacaagcacttct
gggacagattctagaatccagagctccctgaatggattctagcttttgtt
ctcatgtttatttgaatatggggtctcactgtgccagttcatccggatga
ctttcatcccatgaccctccaccctcattgtagtacactgcatagtcagc
tactattccttactggcttgggtggtgtaagctggcaggtgcatttttcc
ttctcaaaataggacttcagaagcctcattattttcaggcagaattcccc
taatctgctgagcatcagttagcacggggcccttctgaggctgcatccta
tccgtctctccagccctagacctaaaccttttgttaaccttggtgttgtc
tgggaactcagaacccctgagatggtaatagcccacacacttaaaggaat
aaatgaagaattaaaatttgtatagcaccaattaccccactttgttgtgt
tcactaccaccctcctgtctccactgctagccaacaatgtaggaccctcc
catggctgcagagaaatgtcaggaagaaaatctcccctcctctactctcc
ttagacacaaggatacatagatgaagacattaaagagtgatgttggctgg
agagatggcttagtgggtaagagcaccaactgttcttccgaaggtcctgg
gttcaaatcccagcaaccaaatggtagctcaccacccgtgaggaatctga
tgccttttttgtggcggctgaagacagctacaggtgtaatacctttaaca
aataaataattttttttttttttgagacaggatttctctgtat
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaaacttgtacaacctctctggaaatcagtctggtggttcctca
gaaaattggacatagtactaccggaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacaagctccactat
gttcatagcagccttgtttataatagccagaagctggaaaaaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gaatactactcagctattaaaaaatgaatttatgaaattcctaggcaaat
ggatggacctggagagtatcatcctgagtgaggtaatccaatcacaaagg
aactcgcacaatatgtactcactgataagtggatattagcccagaaactt
aggatacccaagatataagatacaacttgccaaacgcatgaaattcaaga
agaacgaagaccaaagtgtggacactttgccctttcttagaaatgggaac
aaaacacccatggaaggagttacagagacaaaatttggagctgtgacgaa
agaatggaccatctagtgattgccatatgcaggaatccatcccataatca
gtttccaaatgctgacaccattgcttacactagcaagattttgctgaaag
gacccagatatagctctctcttctgagactatgccagggcctagcaaaca
cagaagtggatgatcacagtcagctattggatgggtcacacggccccaat
ggaggagctagagaaattaccagagctatgggaactgcaccctatagtga
acacatatgactacagtaccccggagctcttgtctctagctgcatatgta
tcaaaggatgggctagtcggcatcattgcaaggagaggcccattgactgc
caactttatattgctcagtacatggaactctcatggccaaaagggaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_3192917_3194013
seq2: B6Ng01-134A21.b_40_1132 (reverse)

seq1  ATACAGAGAAATCCTGTATCAAAAAAAAAAAAAATTATTTA-TTGTTATA  49
      ||||||||||||||||| ||||||||||||||||||||||| |||||| |
seq2  ATACAGAGAAATCCTGTCTCAAAAAAAAAAAAAATTATTTATTTGTTA-A  49

seq1  AGTAATTACA-CTGTAGCTGTCTTCAGCCGCACCAGAAGAGGGCATCAGA  98
      ||  |||||| ||||||||||||||||||||  || || | |||||||||
seq2  AGGTATTACACCTGTAGCTGTCTTCAGCCGCCACA-AAAAAGGCATCAGA  98

seq1  TTCCTCACGGGTGGTGAGCTACCATGTGGTTGCTGGGATTTGAACCCAGG  148
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTCCTCACGGGTGGTGAGCTACCATTTGGTTGCTGGGATTTGAACCCAGG  148

seq1  ACCTTCGGAAGAACAGTTGGTGCTCTTACCCACTAAGCCATCTCTCCAGC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCGGAAGAACAGTTGGTGCTCTTACCCACTAAGCCATCTCTCCAGC  198

seq1  CAACATCACTCTTTAATGTCTTCATCTATGTATCCTTGTGTCTAAGGAGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATCACTCTTTAATGTCTTCATCTATGTATCCTTGTGTCTAAGGAGA  248

seq1  GTAGAGGAGGGGAGATTTTCTTCCTGACATTTCTCTGCAGCCATGGGAGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGGAGGGGAGATTTTCTTCCTGACATTTCTCTGCAGCCATGGGAGG  298

seq1  GTCCTACATTGTGGGCTAGCAGTGGAGACAGGAGGGTGGTAGTGAACACA  348
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTCCTACATTGTTGGCTAGCAGTGGAGACAGGAGGGTGGTAGTGAACACA  348

seq1  ACAAAGTGGGGTAATTGGTGCTATACAAATTTTAATTCTTCATTTATTCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGTGGGGTAATTGGTGCTATACAAATTTTAATTCTTCATTTATTCC  398

seq1  TTTAAGTGTGTGGGCTATTACCATCTCAGGGGTTCTGAGTTCCCAGACAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTGTGTGGGCTATTACCATCTCAGGGGTTCTGAGTTCCCAGACAA  448

seq1  CACCAAGGTTAACAAAAGGTTTAGGTCTAGGGCTGGAGAGACGGATAGGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAGGTTAACAAAAGGTTTAGGTCTAGGGCTGGAGAGACGGATAGGA  498

seq1  TGCAGCCTCAGAAGGGCCCCGTGCTAACTGATGCTCAGCAGATTAGGGGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCCTCAGAAGGGCCCCGTGCTAACTGATGCTCAGCAGATTAGGGGA  548

seq1  ATTCTGCCTGAAAATAATGAGGCTTCTGAAGTCCTATTTTGAGAAGGAAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGCCTGAAAATAATGAGGCTTCTGAAGTCCTATTTTGAGAAGGAAA  598

seq1  AATGCACCTGCCAGCTTACACCACCCAAGCCAGTAAGGAATAGTAGCTGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCACCTGCCAGCTTACACCACCCAAGCCAGTAAGGAATAGTAGCTGA  648

seq1  CTATGCAGTGTACTACAATGAGGGTGGAGGGTCATGGGATGAAAGTCATC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCAGTGTACTACAATGAGGGTGGAGGGTCATGGGATGAAAGTCATC  698

seq1  CGGATGAACTGGCACAGTGAGACCCCATATTCAAATAAACATGAGAACAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGATGAACTGGCACAGTGAGACCCCATATTCAAATAAACATGAGAACAA  748

seq1  AAGCTAGAATCCATTCAGGGAGCTCTGGATTCTAGAATCTGTCCCAGAAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAGAATCCATTCAGGGAGCTCTGGATTCTAGAATCTGTCCCAGAAG  798

seq1  TGCTTGTAAAAATCTATGCTTCTTTTCTTTTTTTTAGCATAGAATAGAGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTAAAAATCTATGCTTCTTTTCTTTTTTTTAGCATAGAATAGAGT  848

seq1  TTATTTAGGGCATGGGGAGGGGAGTTAAAAAAGAGTAAGTAGAGTAGTAG  898
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTATTTAGGGCATGGGGAGGGGAGTTAAAAAAGAGT-AGTAGAGTAGTAG  897

seq1  AGGCAGAGCAAAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAA  948
      |||||||| ||||||||||||||||||||||||||||||||||||||  |
seq2  AGGCAGAG-AAAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG--A  944

seq1  GAGAGGAGAGGTCAGCCATGACCACGTGGAGAGAGGGGGAGCAAGGTGGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGAGAGGTCAGCCATGACCACGTGGAGAGAGGGGGAGCAAGGTGGG  994

seq1  GAAAGAGGCAAAAGAGAGGCAAGAGCAAAATCTATGCTCTTTAGAGACAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGGCAAAAGAGAGGCAAGAGCAAAATCTATGCTCTTTAGAGACAA  1044

seq1  GTCTTCACAAAAAACGTGCTCAGCAGCATTTCCAGGGGGTCAAGAATTC  1097
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCACAAAAAACGTGCTCAGCAGCATTTCCAGGGGGTCAAGAATTC  1093