BAC Information

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BAC

Clone NameB6Ng01-134J02
Chromosome7 (Build37)
Map Location 10,711,010 - 10,712,228
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665582, EG434113, EG665577, LOC665571, LOC100042083, Gm1961, V2r4, LOC100042848, LOC100042096, LOC100042870, LOC100042105, LOC100042859, LOC100042113, LOC100042120, LOC100042126, LOC100042139, LOC100042894, Vmn2r47, 2810047C21Rik, LOC665625, LOC545911, EG625580, LOC100042163, LOC625605, EG434117, EG628152, LOC100042921
Downstream geneVmn2r52, LOC665663, V1re11, LOC628521, LOC628525, LOC100042206, Nlrp4d, LOC100042214, V1re10, Zik1, EG628580, V1re9, V1rl1, EG628596, Nlrp4b, LOC333184, V1re13, BQ559217, LOC637237, LOC236479, EG665879, Zscan4b, LOC665793, EG665798, Gm397, Zscan4-ps1, LOC635187, LOC100042997, LOC100042293
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134J02.bB6Ng01-134J02.g
ACCDH934832DH934833
length1,1981,224
definitionDH934832|Mus musculus domesticus DNA, BAC clone: B6Ng01-134J02, 5' end.DH934833|Mus musculus domesticus DNA, BAC clone: B6Ng01-134J02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggaaatggggtaacatttgaaatataaataaataaaatgacca
ataaaaataaaacaaaggggagggcaggatgaaaatatggcaagaacctg
agaaacaggacgtttgctgggagaatgcctctcctacaaatggtagaaat
atatcaatgatgtctgatcaatttggtacctaaacaaaaatggaaaaggt
gatgctgattgacatgggaacatggaagtgtttaacttcatgaaaactca
acagtatgcagagaactatagacaaccaaggaatactgaaatagggaaag
ataatctacccaagagaggagattttcagttggtaatgcaacaccaagag
ttcagccctgaagtatttatacatacaagttatttactcagtaattttaa
tttaaatatttagaacattcataaatgtatactatgaatatgaaagtgtt
tgaggagtgtgcatgggaatgattaaagtgttgaatgaaaaggggaagtg
atataattatatttaaatcttaaaagtaaaacgtatttcttaaacaagtt
agaaaagaaaaatattttcccagaatacattcatgttattattatgaatt
tttattatattatgctaagtgttctaatgatttctattgcttcacatgac
agcaagtttttccttttactcataattcattagaaattaattctgacatg
tagtactatgttcctttgatgattattttaaatttggggaggttagatgt
ttcaaagttaggaaataaattgagggcaactgtcttagttagggttttac
tgcagtgaacaaacaccatgaccaaggtaattcttatataaaaaaacaat
aattaattggggctggcttacgggttcagaggttcagtccattatcatca
aggtgggagcatggcagcatccaggcaggcatggcacaggcagagctgag
agttctacatcttcatccaaaggctgaaaatggaagactgactatagtgt
atagcagtctcaacaatggtataaatccaaggttcaagggctctttctga
gattcattcactaattaactgtatcctcaagcaatgcaggaaacagctga
gcaaactacaaactctgcatctccatggctgatatgaaagcagcttgcat
ctccatctttcaccttgtgctgaaactgctttcctggctagtcactcc
gaattccagggacagaatgaagaaattaattctgttatggtagatgctcc
tgggaagatattggtatggaagatctagaaaaatcagaatttatgcccat
gatcccaaaacaagatactgtatggattgaattttaaaatttaccaaagg
ggacactggtgaaatatcaatagctttgcccctaaaatagttatcaaaca
gactatttttgataagagtagtggccaataataaaagaaaaattgcaggt
acttgaacaactggtaaaagaaaccttcagcatatagaagagtctaccag
tcctttggaattcccctgtgtttgttttcaaaatagaaatctggaaatta
gaggatgataatggatttaagagcatttaaataattcaggcaataggccc
tttacagcctggacttcctttaccatctgtgatactgagaacctggcctg
taattataattgacttgaaagactgatatttgcaaaaccttcacatgagt
atgcaaagagaagatagtattaagggatagattttcttagctcataaaca
atgtacaaaacatggtaagatttcttagttaattataaaagattaagtaa
gattatgttaattgtcaggaacagatcaggccaaaattgtagtacatctt
acaaatgctgagattgtatcattacaagtggtcaatgaagactggcaaag
agctcatattaactacttgggagaaatgaataacaagtacccgaaaaaca
aaaatatacagcttataaaaagaaaaaaaattgtactctttaacttctag
taaagagaacaccaactccagaggcaccaacatatgaatgcaaataagat
ggagatggcaggttatgaatcagtcaaaagaagcaagtccacaaaagtcc
atttctatcagtttaaaatttgggaatcatatggattccttatagtatta
ttagtttatatgactattcttaacacaatcacagattattttgtatgcag
aaagagttgttttgcatatcgagtgctgaatttgtacctgatactcagaa
tttttccttacttttttgtgcattgcagatgccatcagaagtattacatc
agttatatacttgtatattcagtctccatatacgttttcagttcattagc
tgaagaaatccgaatgacaattattctagaaccaattaattggaaatctc
caaagggtttgaagaaaaataatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_10711010_10712228
seq2: B6Ng01-134J02.b_44_1241

seq1  GAATTCAGGAAATGGGGTAACATTTGAAATATAAATAAATAAAATGACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAAATGGGGTAACATTTGAAATATAAATAAATAAAATGACCA  50

seq1  ATAAAAATAAAACAAAGGGGAGGGCAGGATGAAAATATGGCAAGAACCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATAAAACAAAGGGGAGGGCAGGATGAAAATATGGCAAGAACCTG  100

seq1  AGAAACAGGACGTTTGCTGGGAGAATGCCTCTCCTACAAATGGTAGAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAGGACGTTTGCTGGGAGAATGCCTCTCCTACAAATGGTAGAAAT  150

seq1  ATATCAATGATGTCTGATCAATTTGGTACCTAAACAAAAATGGAAAAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAATGATGTCTGATCAATTTGGTACCTAAACAAAAATGGAAAAGGT  200

seq1  GATGCTGATTGACATGGGAACATGGAAGTGTTTAACTTCATGAAAACTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGATTGACATGGGAACATGGAAGTGTTTAACTTCATGAAAACTCA  250

seq1  ACAGTATGCAGAGAACTATAGACAACCAAGGAATACTGAAATAGGGAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTATGCAGAGAACTATAGACAACCAAGGAATACTGAAATAGGGAAAG  300

seq1  ATAATCTACCCAAGAGAGGAGATTTTCAGTTGGTAATGCAACACCAAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTACCCAAGAGAGGAGATTTTCAGTTGGTAATGCAACACCAAGAG  350

seq1  TTCAGCCCTGAAGTATTTATACATACAAGTTATTTACTCAGTAATTTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCCCTGAAGTATTTATACATACAAGTTATTTACTCAGTAATTTTAA  400

seq1  TTTAAATATTTAGAACATTCATAAATGTATACTATGAATATGAAAGTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATATTTAGAACATTCATAAATGTATACTATGAATATGAAAGTGTT  450

seq1  TGAGGAGTGTGCATGGGAATGATTAAAGTGTTGAATGAAAAGGGGAAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGTGTGCATGGGAATGATTAAAGTGTTGAATGAAAAGGGGAAGTG  500

seq1  ATATAATTATATTTAAATCTTAAAAGTAAAACGTATTTCTTAAACAAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATTATATTTAAATCTTAAAAGTAAAACGTATTTCTTAAACAAGTT  550

seq1  AGAAAAGAAAAATATTTTCCCAGAATACATTCATGTTATTATTATGAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGAAAAATATTTTCCCAGAATACATTCATGTTATTATTATGAATT  600

seq1  TTTATTATATTATGCTAAGTGTTCTAATGATTTCTATTGCTTCACATGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTATATTATGCTAAGTGTTCTAATGATTTCTATTGCTTCACATGAC  650

seq1  AGCAAGTTTTTCCTTTTACTCATAATTCATTAGAAATTAATTCTGACATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGTTTTTCCTTTTACTCATAATTCATTAGAAATTAATTCTGACATG  700

seq1  TAGTACTATGTTCCTTTGATGATTATTTTAAATTTGGGGAGGTTAGATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACTATGTTCCTTTGATGATTATTTTAAATTTGGGGAGGTTAGATGT  750

seq1  TTCAAAGTTAGGAAATAAATTGAGGGCAACTGTCTTAGTTAGGGTTTTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGTTAGGAAATAAATTGAGGGCAACTGTCTTAGTTAGGGTTTTAC  800

seq1  TGCAGTGAACAAACACCATGACCAAGGTAATTCTTATATAAAAAAACAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTGAACAAACACCATGACCAAGGTAATTCTTATATAAAAAAACAAT  850

seq1  AATTAATTGGGGCTGGCTTACGGGTTCAGAGGTTCAGTCCATTATCATCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATTGGGGCTGGCTTACGGGTTCAGAGGTTCAGTCCATTATCATCA  900

seq1  AGGTGGGAGCATGGCAGCATCCAGGCAGGCATGGCACAGGCAGAGCTGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGGAGCATGGCAGCATCCAGGCAGGCATGGCACAGGCAGAGCTGAG  950

seq1  AGTTCTACATCTTCATCCAAAGGCTGATAATGGAAGACTGACTATAGTGT  1000
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGTTCTACATCTTCATCCAAAGGCTGAAAATGGAAGACTGACTATAGTGT  1000

seq1  ATAGCAGTCTCAACAATGTTATAAATCCAAAGTTCAAGGGCTC-TTCTGA  1049
      |||||||||||||||||| ||||||||||| |||||||||||| ||||||
seq2  ATAGCAGTCTCAACAATGGTATAAATCCAAGGTTCAAGGGCTCTTTCTGA  1050

seq1  GATTCATCCAACTAATTAACTGTAATCCCCAAAGCAATGCAGGAAACCAG  1099
      ||||||| | ||||||||||||| |||| | ||||||||||||||| |||
seq2  GATTCATTC-ACTAATTAACTGT-ATCCTC-AAGCAATGCAGGAAA-CAG  1096

seq1  CTGAGCAAACTACAAACTCTGCATCTCCATGGCTGATATGAAAGCAGTCT  1149
      |||||||||||||||||||||||||||||||||||||||||||||||   
seq2  CTGAGCAAACTACAAACTCTGCATCTCCATGGCTGATATGAAAGCAG--C  1144

seq1  TTGCATCTCCATTCCTTTTTCATCTT-TGTTGCCTGCAACAAACTGCTTT  1198
      |||||||||||    | ||||| ||| || ||        ||||||||| 
seq2  TTGCATCTCCA----TCTTTCACCTTGTGCTG--------AAACTGCTT-  1181

seq1  CTCCTGGGCTAGTTCCACTCC  1219
       |||| |||||||  ||||||
seq2  -TCCT-GGCTAGT--CACTCC  1198