BAC Information

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BAC

Clone NameB6Ng01-134L20
Chromosome7 (Build37)
Map Location 125,231,220 - 125,232,096
singlet/doubletsinglet
Overlap genenone
Upstream geneXylt1, LOC669758
Downstream geneRps15a, Arl6ip1, 2610207I05Rik, LOC100043339, Syt17, LOC100042845, E030018N11Rik, Coq7, Tmc7, B230311B06Rik, Tmc5, Mir16, 6330503K22Rik, 9030624J02Rik, 2310008H09Rik, Iqck, Gprc5b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134L20.g
ACCDH934961
length876
definitionDH934961|Mus musculus domesticus DNA, BAC clone: B6Ng01-134L20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttcttttctgtctataagtcctttgcacctgttggcgaaccca
cttgaatagggcaccggatctctttacagatggttgtgagccatcatgtg
gtttctgggaattgaactcaggacctctggaagaacactcactcattgtt
cttaaccacatagccatcctttgcatgccaatttcttccaaactttaaaa
cctgtgtgtgcctttacttccattctttggttacaatgtctagaacccac
aaacacctggtccaaagatcaactcccatgaacaaaaaggcctcttgagg
gttgagtctactgagaaattcaagtacagacacataatcactttagaaag
ttacccccgggtctcctcgcggcttttggagctgataactggccatagga
ggctattgggaagccccataagggttcccacttacgccaggggctggttg
tgaccaggtgactatgtcactgtgtaggtgcctgcttgactattcattca
taaatcttgtgcacactctacatgaatgagacatccatagtctgtacatt
tatgatggacaatctaaagagtgtgttaactcttaaaaatggagggctag
ggaaacagggacatggcttggcgcgtaacgagctgctgcccaaacatgag
ggcctgagctcagacccccataactccgcaaaaggccaggaatgatgacg
tacgctaacggttctggccctgtgcgaggcagggacaggagggtccccat
aaaattatcccttaaaagctctctggacccccatggagccgactggtcag
catgttttattgagagattctatctctcatataatcttctttacacacag
ataaagacatgagtgcaacttctggc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_125231220_125232096
seq2: B6Ng01-134L20.g_69_944

seq1  GAATTCTTTCTTTTATGTATATAAGTCCATTGTAGCTGTATTCAGACACA  50
      |||||||||||||| ||| ||||||||| ||| | ||||   |  || ||
seq2  GAATTCTTTCTTTTCTGTCTATAAGTCCTTTGCACCTGTTGGCGAACCCA  50

seq1  CTAGAAGAGGGCACCTGATCACTTTACAGATGGTTGTGAGCCACCATGTG  100
      || ||| |||||||| |||| |||||||||||||||||||||| ||||||
seq2  CTTGAATAGGGCACCGGATCTCTTTACAGATGGTTGTGAGCCATCATGTG  100

seq1  GTTTCTGGGAATTGAACTCAGGACCTCTGGAAGAACACTCACTCAGTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GTTTCTGGGAATTGAACTCAGGACCTCTGGAAGAACACTCACTCATTGTT  150

seq1  CTTAACCACGTAGCCATCCTTTGCATGCCAGTTTCTTCCAAACTTTAAAA  200
      ||||||||| |||||||||||||||||||| |||||||||||||||||||
seq2  CTTAACCACATAGCCATCCTTTGCATGCCAATTTCTTCCAAACTTTAAAA  200

seq1  CCTGTGTGTGCCTTTACTTCCATTCTTTGGTTACAATGTCAAGAACCCAC  250
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCTGTGTGTGCCTTTACTTCCATTCTTTGGTTACAATGTCTAGAACCCAC  250

seq1  AAACACATGGTCCAAAGAGCAACTCCCAGGAACAAAAAGGCCTCTTGAGG  300
      |||||| ||||||||||| ||||||||| |||||||||||||||||||||
seq2  AAACACCTGGTCCAAAGATCAACTCCCATGAACAAAAAGGCCTCTTGAGG  300

seq1  GTTGAGTCTACTGAGAAATTCAAGTACAGAGACATAATCACTTTAGAAAG  350
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GTTGAGTCTACTGAGAAATTCAAGTACAGACACATAATCACTTTAGAAAG  350

seq1  TTACCCCCAGGTCTCCTCACAGCAGCTGGAGCTGAGAACTGGCCAGAGGA  400
      |||||||| ||||||||| | ||   ||||||||| ||||||||| ||||
seq2  TTACCCCCGGGTCTCCTCGCGGCTTTTGGAGCTGATAACTGGCCATAGGA  400

seq1  GGCTATTGGGAAGCCCCAGAAGGGTTCCCACAGAGGCCAGGGGCTGGCAG  450
      |||||||||||||||||| ||||||||||||  | ||||||||||||  |
seq2  GGCTATTGGGAAGCCCCATAAGGGTTCCCACTTACGCCAGGGGCTGGTTG  450

seq1  TGACCAGGTGACTATGTCACTGTGTAGGTGCCTGCTTGACTATTCATTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAGGTGACTATGTCACTGTGTAGGTGCCTGCTTGACTATTCATTCA  500

seq1  TAAGTCTTGTGCACTCTCTACATGAATGAGACATCCATAGTCTGTACATT  550
      ||| |||||||||| |||||||||||||||||||||||||||||||||||
seq2  TAAATCTTGTGCACACTCTACATGAATGAGACATCCATAGTCTGTACATT  550

seq1  TATGATGGACAATCTAAAGAGTGTGTTAAGGTTTAAAAATGGAGGGCTAG  600
      |||||||||||||||||||||||||||||   ||||||||||||||||||
seq2  TATGATGGACAATCTAAAGAGTGTGTTAACTCTTAAAAATGGAGGGCTAG  600

seq1  GGAAACAGGGAAATGGCTTGGCAGGTAAGGAGCTGCTGCCCAAACATGAG  650
      ||||||||||| ||||||||||  |||| |||||||||||||||||||||
seq2  GGAAACAGGGACATGGCTTGGCGCGTAACGAGCTGCTGCCCAAACATGAG  650

seq1  GGCCTGAGCTCAGACCCCCATATCCATGCAAAAAGCCAGGAATGATGACG  700
      |||||||||||||||||||||| |   |||||| ||||||||||||||||
seq2  GGCCTGAGCTCAGACCCCCATAACTCCGCAAAAGGCCAGGAATGATGACG  700

seq1  TACACCAGTGGTTCTGGCCCTGTG-GAGGCAGGGACAGGAGGGTCCCCAG  749
      ||| | |  ||||||||||||||| |||||||||||||||||||||||| 
seq2  TACGCTAACGGTTCTGGCCCTGTGCGAGGCAGGGACAGGAGGGTCCCCAT  750

seq1  AGAAGTATACCCTAGAAGCTCTCTGGACAGCCATGTAGCCAACTGGTCAG  799
      | || ||| || || |||||||||||||  ||||| |||| |||||||||
seq2  AAAATTATCCCTTAAAAGCTCTCTGGACCCCCATGGAGCCGACTGGTCAG  800

seq1  CAAGTTTTAGTGAGAGATTCTATCTCTAAAATAATAATAATTACACAGAG  849
      || |||||| ||||||||||||||||| | |||||  |  ||||||| ||
seq2  CATGTTTTATTGAGAGATTCTATCTCTCATATAATCTTCTTTACACACAG  850

seq1  ATAAAGACACAAAGTGCCAACTTCTGGC  877
      |||||||||   |||| |||||||||||
seq2  ATAAAGACA-TGAGTG-CAACTTCTGGC  876