BAC Information

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BAC

Clone NameB6Ng01-134P11
Chromosome7 (Build37)
Map Location 103,110,102 - 103,234,023
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040132, LOC666823, Frda-ps
Downstream geneEG666836, Odz4, LOC670727, LOC666858, Nars2, Gab2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134P11.bB6Ng01-134P11.g
ACCDH935133DH935134
length957712
definitionDH935133|Mus musculus domesticus DNA, BAC clone: B6Ng01-134P11, 5' end.DH935134|Mus musculus domesticus DNA, BAC clone: B6Ng01-134P11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(103,110,102 - 103,111,058)(103,233,312 - 103,234,023)
sequence
gaattcagttactaatacagatgtaaaaagaaaaaaaaaagtctagtacc
tctattccaagagctagggaggctcgctagccagcccgtctagtgaactc
agcaagctgcaggctcagtgtgagactatatctttaaaaataagatcagc
gagcacagaagaagaaatgcagtgtcaacaacctctagcctccccatgca
cacatctgtaacatgaacctaaacatgagtgtacacacacaaatgaagca
acagaatagttacaagtcttgaaaaaggctaaaagaacataaccaggtga
tcgcagatcacaacaaagacacagtgacaaagggtcccatgaggcagtgt
tcagattagatgaatgaaaacctgtgagtgtggtggtggtgggagggtgc
tttgcatctcctgacaagggctggagggtctcttttgaggatgagggcca
cagagaactctggggaggttttacttgaggtaaataagggagtgacagtg
gtattgcttttgcccaaaggcaagtgttgcttgcatatctagctaataag
tacgaggagaacgcggtaaggcctaaacaaatctagttttttttccctcc
ctctctggccctgtggatgtggcagtctagggaggagagaaagatggaag
cctctcttttcatcgggggcaaaaagaaatgtatgccacagagatgggtt
ggaatcaacactttcagctttctcttttcccacacacacacacaaaaaaa
agatttaattttaacatgaaaatttgatgagcaaatatgcagccttgcct
gggtcgatatggacatttcagatgcattactgtcattactgagagaactt
ccagttcgtggaccattaggacgacgcactgaggaaattagctagatcat
gctagggttaacctctctgtggcattgtgggaagagatgctctccctgca
gtgtggt
gaattcattaaaggaactgcagatgaagaacatgagagatgtagcaggag
agacacaggctctctcagagtaggtagttctgcaaaaaggaagcaagcct
ggtctgttaaataaaaattatatcaactcaaagaaacagagaaatcattt
caaaaaacaagtgatgataattggatgttgagctttctttcataaaaatg
ttcagcaggagctggctgagactccaaggtagagatggggtaaatgcggt
gagtggggctgagctaggctgagctaggctgagctaggctgagctcagag
tctactctttggttaactgctgtgaagggagagctctgtcaccatgcagg
ttgatggtcagtcaggtacagtggtgaagaagaactcatgtggagacctc
aagatgtcacataggtgccataggtcctacaaatgcctcactagaaagtt
tggaaagttttgtttgtttgagttttgttgttgttttctcacaaaacaga
agaatacaaaaacttgagcttttgggaatgtggaaagtgatcaaaggtga
ttgggagcgaacacacacatttttttttccagtcaacattgcaaagatgg
atgcctgcctgttaggagataagtgagatccagcccctggatgaaaatgc
atctccagtttagtcaaaggcttacaaataagtgtgaggattggtgtgtg
tgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_103110102_103111058
seq2: B6Ng01-134P11.b_44_1000

seq1  GAATTCAGTTACTAATACAGATGTAAAAAGAAAAAAAAAAGTCTAGTACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTACTAATACAGATGTAAAAAGAAAAAAAAAAGTCTAGTACC  50

seq1  TCTATTCCAAGAGCTAGGGAGGCTCGCTAGCCAGCCCGTCTAGTGAACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTCCAAGAGCTAGGGAGGCTCGCTAGCCAGCCCGTCTAGTGAACTC  100

seq1  AGCAAGCTGCAGGCTCAGTGTGAGACTATATCTTTAAAAATAAGATCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGCTGCAGGCTCAGTGTGAGACTATATCTTTAAAAATAAGATCAGC  150

seq1  GAGCACAGAAGAAGAAATGCAGTGTCAACAACCTCTAGCCTCCCCATGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACAGAAGAAGAAATGCAGTGTCAACAACCTCTAGCCTCCCCATGCA  200

seq1  CACATCTGTAACATGAACCTAAACATGAGTGTACACACACAAATGAAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCTGTAACATGAACCTAAACATGAGTGTACACACACAAATGAAGCA  250

seq1  ACAGAATAGTTACAAGTCTTGAAAAAGGCTAAAAGAACATAACCAGGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATAGTTACAAGTCTTGAAAAAGGCTAAAAGAACATAACCAGGTGA  300

seq1  TCGCAGATCACAACAAAGACACAGTGACAAAGGGTCCCATGAGGCAGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCAGATCACAACAAAGACACAGTGACAAAGGGTCCCATGAGGCAGTGT  350

seq1  TCAGATTAGATGAATGAAAACCTGTGAGTGTGGTGGTGGTGGGAGGGTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTAGATGAATGAAAACCTGTGAGTGTGGTGGTGGTGGGAGGGTGC  400

seq1  TTTGCATCTCCTGACAAGGGCTGGAGGGTCTCTTTTGAGGATGAGGGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATCTCCTGACAAGGGCTGGAGGGTCTCTTTTGAGGATGAGGGCCA  450

seq1  CAGAGAACTCTGGGGAGGTTTTACTTGAGGTAAATAAGGGAGTGACAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAACTCTGGGGAGGTTTTACTTGAGGTAAATAAGGGAGTGACAGTG  500

seq1  GTATTGCTTTTGCCCAAAGGCAAGTGTTGCTTGCATATCTAGCTAATAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGCTTTTGCCCAAAGGCAAGTGTTGCTTGCATATCTAGCTAATAAG  550

seq1  TACGAGGAGAACGCGGTAAGGCCTAAACAAATCTAGTTTTTTTTCCCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGAGGAGAACGCGGTAAGGCCTAAACAAATCTAGTTTTTTTTCCCTCC  600

seq1  CTCTCTGGCCCTGTGGATGTGGCAGTCTAGGGAGGAGAGAAAGATGGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGGCCCTGTGGATGTGGCAGTCTAGGGAGGAGAGAAAGATGGAAG  650

seq1  CCTCTCTTTTCATCGGGGGCAAAAAGAAATGTATGCCACAGAGATGGGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTTTTCATCGGGGGCAAAAAGAAATGTATGCCACAGAGATGGGTT  700

seq1  GGAATCAACAC-TTCAGC-TTCTCTTTTCCCACACACACACACAAAAAAA  748
      ||||||||||| |||||| |||||||||||||||||||||||||||||||
seq2  GGAATCAACACTTTCAGCTTTCTCTTTTCCCACACACACACACAAAAAAA  750

seq1  AGATTTTAATTTTAACATGAAAATTTGATGAGCAAATATGCAGCCTTGCC  798
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGA-TTTAATTTTAACATGAAAATTTGATGAGCAAATATGCAGCCTTGCC  799

seq1  TGGGTCGATATGGACATTTCAGATGCATTTACTGTCATTACTGAGAGAAC  848
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TGGGTCGATATGGACATTTCAGATGCA-TTACTGTCATTACTGAGAGAAC  848

seq1  CTCCAGTTCGTGGACCATTAAGACAACGCACTGAGGAAATTAGCTAGATC  898
       ||||||||||||||||||| ||| |||||||||||||||||||||||||
seq2  TTCCAGTTCGTGGACCATTAGGACGACGCACTGAGGAAATTAGCTAGATC  898

seq1  ATGCTTAGGGTAACCACTCTGTGGGCATTGTGGGAAGAGATGCTCTTCCT  948
      |||||  || ||||| |||||| ||||||||||||||||||||||| |||
seq2  ATGCTAGGGTTAACCTCTCTGT-GGCATTGTGGGAAGAGATGCTCTCCCT  947

seq1  GCA-AGTGGT  957
      |||  |||||
seq2  GCAGTGTGGT  957

seq1: chr7_103233312_103234023
seq2: B6Ng01-134P11.g_69_780 (reverse)

seq1  CACACACACACACACACACCAATCCTCACACTTATTTGTAAGCCTTTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACCAATCCTCACACTTATTTGTAAGCCTTTGAC  50

seq1  TAAACTGGAGATGCATTTTCATCCAGGGGCTGGATCTCACTTATCTCCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTGGAGATGCATTTTCATCCAGGGGCTGGATCTCACTTATCTCCTA  100

seq1  ACAGGCAGGCATCCATCTTTGCAATGTTGACTGGAAAAAAAAATGTGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCAGGCATCCATCTTTGCAATGTTGACTGGAAAAAAAAATGTGTGT  150

seq1  GTTCGCTCCCAATCACCTTTGATCACTTTCCACATTCCCAAAAGCTCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCGCTCCCAATCACCTTTGATCACTTTCCACATTCCCAAAAGCTCAAG  200

seq1  TTTTTGTATTCTTCTGTTTTGTGAGAAAACAACAACAAAACTCAAACAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTATTCTTCTGTTTTGTGAGAAAACAACAACAAAACTCAAACAAA  250

seq1  CAAAACTTTCCAAACTTTCTAGTGAGGCATTTGTAGGACCTATGGCACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTTTCCAAACTTTCTAGTGAGGCATTTGTAGGACCTATGGCACCT  300

seq1  ATGTGACATCTTGAGGTCTCCACATGAGTTCTTCTTCACCACTGTACCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGACATCTTGAGGTCTCCACATGAGTTCTTCTTCACCACTGTACCTG  350

seq1  ACTGACCATCAACCTGCATGGTGACAGAGCTCTCCCTTCACAGCAGTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACCATCAACCTGCATGGTGACAGAGCTCTCCCTTCACAGCAGTTAA  400

seq1  CCAAAGAGTAGACTCTGAGCTCAGCCTAGCTCAGCCTAGCTCAGCCTAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGAGTAGACTCTGAGCTCAGCCTAGCTCAGCCTAGCTCAGCCTAGC  450

seq1  TCAGCCCCACTCACCGCATTTACCCCATCTCTACCTTGGAGTCTCAGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCCCACTCACCGCATTTACCCCATCTCTACCTTGGAGTCTCAGCCA  500

seq1  GCTCCTGCTGAACATTTTTATGAAAGAAAGCTCAACATCCAATTATCATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTGCTGAACATTTTTATGAAAGAAAGCTCAACATCCAATTATCATC  550

seq1  ACTTGTTTTTTGAAATGATTTCTCTGTTTCTTTGAGTTGATATAATTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTTTTTTGAAATGATTTCTCTGTTTCTTTGAGTTGATATAATTTTT  600

seq1  ATTTAACAGACCAGGCTTGCTTCCTTTTTGCAGAACTACCTACTCTGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAACAGACCAGGCTTGCTTCCTTTTTGCAGAACTACCTACTCTGAGA  650

seq1  GAGCCTGTGTCTCTCCTGCTACATCTCTCATGTTCTTCATCTGCAGTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTGTGTCTCTCCTGCTACATCTCTCATGTTCTTCATCTGCAGTTCC  700

seq1  TTTAATGAATTC  712
      ||||||||||||
seq2  TTTAATGAATTC  712