BAC Information

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BAC

Clone NameB6Ng01-135B03
Chromosome7 (Build37)
Map Location 112,701,469 - 112,762,299
singlet/doubletdoublet
Overlap geneSmpd1, Apbb1, Hpxn, Trim3
Upstream geneOlfr651, Olfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a, Dub1, Olfr665, Olfr666, Olfr667, Olfr668, Olfr669, EG545987, Olfr670, Olfr671, Olfr672, GA_x5J8B7W6B6J-189947-189022, Olfr674-ps1, Olfr675, Olfr676, Olfr677, LOC667987, Olfr678, Olfr679, Olfr680-ps1, Olfr681, Olfr682-ps1, Olfr683, Olfr684, Olfr685, Olfr686, EG668035, Olfr688, Olfr689, Olfr690, Olfr691, Olfr692, EG545989, 4632419K20Rik, Cnga4, EG244189, Cckbr, Prkcdbp
Downstream geneArfip2, Fxc1, Dnhd1, LOC100042811, LOC672646, 1500003O22Rik, Ilk, Taf10, Tpp1, Dchs1, Mrpl17, 9130208D14Rik, LOC626055, LOC100042856, LOC100042047, EG668108, EG668117, Gvin1, LOC672660, LOC100042097, LOC668128, LOC634394, EG209380, EG668139, Gm1966
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-135B03.bB6Ng01-135B03.g
ACCDH935206DH935207
length1,0561,086
definitionDH935206|Mus musculus domesticus DNA, BAC clone: B6Ng01-135B03, 5' end.DH935207|Mus musculus domesticus DNA, BAC clone: B6Ng01-135B03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,761,228 - 112,762,299)(112,701,469 - 112,702,565)
sequence
gaattcctgtcaactactccagccacaccagtgaggtcctcaaacagggc
tggtgctagtgagcctctgggcctgtcatggattcttctggttggtacct
cagttgatatctttattggctgttggctcacatgtctccttctcttggtg
ccttttcccaccaaacccttggtcccttttgtgttttcatactcccgtca
gtcacacctgtcctgcatgtccttaaggtagccctctcgtgatccctctg
tacccctggcctggtgtcagcacatacttgttgaatgaatgggatcttgc
taggaccctttcctctatacccacagtgttcccctcctccctgcaccctc
ccttgctcctctactccaggttttctccaatgagggccagttcaagttcc
gatttggggtccgtgggcgctcacctgggcaactacagcgtcctacaggt
gtggcagtggacaccaatggagacattattgtggcagactatgacaaccg
ttgggtcagcatcttctctcctgaaggcaagttcaaggtgagaagcttgc
tgttgctgtactacaaacccctggtgacctgctcagatggccatgctact
gggtcaggccctgaagtggtctatcaccagctcaagattctgctttgatc
ccaggccaagacttttctttctactatactagtcaggataaagtccctta
tggtatgccttccctacagaccaagattggagctggccgcctcatgggac
ccaagggagtggctgtggaccgaaatggacatatcattgtggtggataac
aaatcttgctgtgtcttcacctttccagcccaatggcaagcttgttgggc
gttttggaggccgtggggccactgaccgccactttgcaggtatagaagca
accccagattagactgagatgctgcgattcatagaatttcccagggttcc
tctggctgtaaaggccccttctatatcttgaccctgattcctttctacta
ctagtcatctccagagacagggtatctcaccctcagagatctaccctcac
tgactt
gaattctgaattaaagctttgttagaagattggctggctcccgaactgtg
gatcctggggcaagacatagtgagatcctgtctcaaaaacaaaacaaaca
aacaacaacagataaaataggattaaaaacacttaagaagacctttgaga
gatgagatgtaacccatacctggcaccattatcagtgtaagggcctgtgg
ctagataggtcataacccccatagcggggcagagaacctactactattat
tctgctaataggcacagtatttaaatgactttagtgtacccgtagatcag
agcacttagcagtcctcaccagtgaagcttcttgaagcaggagagagtta
aacacagacacctacaaatgatcatcagagaacaagagacttcgaagtga
tcctccctaaatggggtctatatcacacctctccttacaaggctaagtga
ttgaaagtgggactgaaagactggaagagccagaggcagcgggtgactaa
aggaaacttttctggcacgacagggaagttgcatgcagtgaaatcgccat
gattgtgacagcacgcacaggatgttcaagcgagacaaaattccaaaggc
tcactcctagctaaggcgtattggcatcggagagctcctagaagaggcag
ttttctttttaaggatatgacgacccctggtaggttgaccaggctccagg
gcaggtcccacacctaatagtgttgggacctgggtagaattcccagcacg
cagcacgggcgtggcgacctcaatacatctataactccagtccaggtgga
tcctcttccggcctccagcagcaccacgcacgtggtgcacacacatacaa
aatacccatacacataaataaataataatgcaaattttaaattaaaagaa
agacacattacaaaaccttaagtgattcaagctgctgtaatggtggcaga
gcatagaaatctaggggagaccgtccatggcagtcaatcgctcaaatgca
agcatcgctgctccagccctctctagttatcttcctcagttatgaccagc
tgagccggcatctattctagaatctgaatgtttaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_112761228_112762299
seq2: B6Ng01-135B03.b_46_1101 (reverse)

seq1  AAGTCAGGTGAGGGGTAGGATCTCTGGGAGGGGTGAGATACCCTGTCTCT  50
      |||||| |||| ||||| ||||||||    ||||||||||||||||||||
seq2  AAGTCA-GTGA-GGGTA-GATCTCTG---AGGGTGAGATACCCTGTCTCT  44

seq1  GGGAGGATGGAACTAGGTAGTAGGAAAGGGGAATCAGGGTCAAGATATAG  100
      ||   ||||  |||| ||||||| ||   |||||||||||||||||||||
seq2  GG--AGATG--ACTA-GTAGTAGAAA---GGAATCAGGGTCAAGATATAG  86

seq1  AAGGGGCCTTTACAGCCAGAGG-ACCCTGGGAAATTCTATGGAATCGCAG  149
      |||||||||||||||||||||| ||||||||||||||||| |||||||||
seq2  AAGGGGCCTTTACAGCCAGAGGAACCCTGGGAAATTCTAT-GAATCGCAG  135

seq1  CATCTCAGTCTAATCTTGGGGTTGCTTTCTTATACCTGCAAAGTGGCGGT  199
      ||||||||||||||| |||||||||||   ||||||||||||||||||||
seq2  CATCTCAGTCTAATC-TGGGGTTGCTT--CTATACCTGCAAAGTGGCGGT  182

seq1  CAGTGGCCCCACGGCCTCCAAAACGCCCAACAAGCTTGCCATTGGGCTGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGCCCCACGGCCTCCAAAACGCCCAACAAGCTTGCCATTGGGCTGG  232

seq1  -AAGGTGAAGACACAGCAAGATTTGTTATCCACCACAATGATATGTCCAT  298
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTGAAGACACAGCAAGATTTGTTATCCACCACAATGATATGTCCAT  282

seq1  TTCGGTCCACAGCCACTCCCTTGGGTCCCATGAGGCGGCCAGCTCCAATC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGTCCACAGCCACTCCCTTGGGTCCCATGAGGCGGCCAGCTCCAATC  332

seq1  TTGGTCTGTAGGGAAGGCATACCATAAGGGACTTTATCCTGACTAGTATA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCTGTAGGGAAGGCATACCATAAGGGACTTTATCCTGACTAGTATA  382

seq1  GTAGAAAGAAAAGTCTTGGCCTGGGATCAAAGCAGAATCTTGAGCTGGTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAAGAAAAGTCTTGGCCTGGGATCAAAGCAGAATCTTGAGCTGGTG  432

seq1  ATAGACCACTTCAGGGCCTGACCCAGTAGCATGGCCATCTGAGCAGGTCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACCACTTCAGGGCCTGACCCAGTAGCATGGCCATCTGAGCAGGTCA  482

seq1  CCAGGGGTTTGTAGTACAGCAACAGCAAGCTTCTCACCTTGAACTTGCCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGGTTTGTAGTACAGCAACAGCAAGCTTCTCACCTTGAACTTGCCT  532

seq1  TCAGGAGAGAAGATGCTGACCCAACGGTTGTCATAGTCTGCCACAATAAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAGAGAAGATGCTGACCCAACGGTTGTCATAGTCTGCCACAATAAT  582

seq1  GTCTCCATTGGTGTCCACTGCCACACCTGTAGGACGCTGTAGTTGCCCAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCATTGGTGTCCACTGCCACACCTGTAGGACGCTGTAGTTGCCCAG  632

seq1  GTGAGCGCCCACGGACCCCAAATCGGAACTTGAACTGGCCCTCATTGGAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCGCCCACGGACCCCAAATCGGAACTTGAACTGGCCCTCATTGGAG  682

seq1  AAAACCTGGAGTAGAGGAGCAAGGGAGGGTGCAGGGAGGAGGGGAACACT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTGGAGTAGAGGAGCAAGGGAGGGTGCAGGGAGGAGGGGAACACT  732

seq1  GTGGGTATAGAGGAAAGGGTCCTAGCAAGATCCCATTCATTCAACAAGTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTATAGAGGAAAGGGTCCTAGCAAGATCCCATTCATTCAACAAGTA  782

seq1  TGTGCTGACACCAGGCCAGGGGTACAGAGGGATCACGAGAGGGCTACCTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTGACACCAGGCCAGGGGTACAGAGGGATCACGAGAGGGCTACCTT  832

seq1  AAGGACATGCAGGACAGGTGTGACTGACGGGAGTATGAAAACACAAAAGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACATGCAGGACAGGTGTGACTGACGGGAGTATGAAAACACAAAAGG  882

seq1  GACCAAGGGTTTGGTGGGAAAAGGCACCAAGAGAAGGAGACATGTGAGCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAGGGTTTGGTGGGAAAAGGCACCAAGAGAAGGAGACATGTGAGCC  932

seq1  AACAGCCAATAAAGATATCAACTGAGGTACCAACCAGAAGAATCCATGAC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCCAATAAAGATATCAACTGAGGTACCAACCAGAAGAATCCATGAC  982

seq1  AGGCCCAGAGGCTCACTAGCACCAGCCCTGTTTGAGGACCTCACTGGTGT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCAGAGGCTCACTAGCACCAGCCCTGTTTGAGGACCTCACTGGTGT  1032

seq1  GGCTGGAGTAGTTGACAGGAATTC  1072
      ||||||||||||||||||||||||
seq2  GGCTGGAGTAGTTGACAGGAATTC  1056

seq1: chr7_112701469_112702565
seq2: B6Ng01-135B03.g_69_1154

seq1  GAATTCTGAATTAAAGCTTTGTTAGAAGATTGGCTGGCTCCCGAACTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAATTAAAGCTTTGTTAGAAGATTGGCTGGCTCCCGAACTGTG  50

seq1  GATCCTGGGGCAAGACATAGTGAGATCCTGTCTCAAAAACAAAACAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTGGGGCAAGACATAGTGAGATCCTGTCTCAAAAACAAAACAAACA  100

seq1  AACAACAACAGATAAAATAGGATTAAAAACACTTAAGAAGACCTTTGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAACAGATAAAATAGGATTAAAAACACTTAAGAAGACCTTTGAGA  150

seq1  GATGAGATGTAACCCATACCTGGCACCATTATCAGTGTAAGGGCCTGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGATGTAACCCATACCTGGCACCATTATCAGTGTAAGGGCCTGTGG  200

seq1  CTAGATAGGTCATAACCCCCATAGCGGGGCAGAGAACCTACTACTATTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATAGGTCATAACCCCCATAGCGGGGCAGAGAACCTACTACTATTAT  250

seq1  TCTGCTAATAGGCACAGTATTTAAATGACTTTAGTGTACCCGTAGATCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTAATAGGCACAGTATTTAAATGACTTTAGTGTACCCGTAGATCAG  300

seq1  AGCACTTAGCAGTCCTCACCAGTGAAGCTTCTTGAAGCAGGAGAGAGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTTAGCAGTCCTCACCAGTGAAGCTTCTTGAAGCAGGAGAGAGTTA  350

seq1  AACACAGACACCTACAAATGATCATCAGAGAACAAGAGACTTCGAAGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGACACCTACAAATGATCATCAGAGAACAAGAGACTTCGAAGTGA  400

seq1  TCCTCCCTAAATGGGGTCTATATCACACCTCTCCTTACAAGGCTAAGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCTAAATGGGGTCTATATCACACCTCTCCTTACAAGGCTAAGTGA  450

seq1  TTGAAAGTGGGACTGAAAGACTGGAAGAGCCAGAGGCAGCGGGTGACTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGTGGGACTGAAAGACTGGAAGAGCCAGAGGCAGCGGGTGACTAA  500

seq1  AGGAAACTTTTCTGGCACGACAGGGAAGTTGCATGCAGTGAAATCGCCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAACTTTTCTGGCACGACAGGGAAGTTGCATGCAGTGAAATCGCCAT  550

seq1  GATTGTGACAGCACGCACAGGATGTTCAAGCGAGACAAAATTCCAAAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTGACAGCACGCACAGGATGTTCAAGCGAGACAAAATTCCAAAGGC  600

seq1  TCACTCCTAGCTAAGGCGTATTGGCATCGGAGAGCTCCTAGAAGAGGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCCTAGCTAAGGCGTATTGGCATCGGAGAGCTCCTAGAAGAGGCAG  650

seq1  TTTTCTTTTTAAGGATATGACGACCCCTGGTAGGTTGACCAGGCTCCAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTTAAGGATATGACGACCCCTGGTAGGTTGACCAGGCTCCAGG  700

seq1  GCAGGTCCCACACCTAATAGTGTTGGGACCTGGGTAGAATTCCCAGCACG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTCCCACACCTAATAGTGTTGGGACCTGGGTAGAATTCCCAGCACG  750

seq1  CAGCACGGGCGTGGCGACCTCAATACATCTATAACTCCAGTCCAGGTGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACGGGCGTGGCGACCTCAATACATCTATAACTCCAGTCCAGGTGGA  800

seq1  TCCTCTTCCGGCCTCCAGCAGGCACCACGCACGTGGTGCACACACATACA  850
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TCCTCTTCCGGCCTCCAGCA-GCACCACGCACGTGGTGCACACACATACA  849

seq1  AAATACCCATACACATAAATAAATAATAATGCAAAATTTTAAATTAAAAG  900
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AAATACCCATACACATAAATAAATAATAATGC-AAATTTTAAATTAAAAG  898

seq1  AAAGACACATTAACAAAACCTTAAGTGATTCAAGGCTGCTGTAATGGTGG  950
      ||||||||||| ||||||||||||||||||||| ||||||||||||||||
seq2  AAAGACACATT-ACAAAACCTTAAGTGATTCAA-GCTGCTGTAATGGTGG  946

seq1  CAGAGCATAGGAAATCGAGGGGAGGACCGTCCATGGCAGGTCAATCCGCT  1000
      ||||||||| |||||| |||||| |||||||||||||| |||||| ||||
seq2  CAGAGCATA-GAAATCTAGGGGA-GACCGTCCATGGCA-GTCAAT-CGCT  992

seq1  C-AATGCAAGCATCGCTGCCCCAGCCCTCTCTAGTTAATCTT-CTCAGTT  1048
      | ||||||||||||||||| |||||||||||||||| ||||| |||||||
seq2  CAAATGCAAGCATCGCTGCTCCAGCCCTCTCTAGTT-ATCTTCCTCAGTT  1041

seq1  TAATGACCAGCTGAGCCGGGCATCTATTCTAGGAATCTGAATGTTTAAA  1097
        ||||||||||||||| ||||||||||||| |||||||||||||||||
seq2  --ATGACCAGCTGAGCC-GGCATCTATTCTA-GAATCTGAATGTTTAAA  1086