BAC Information

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BAC

Clone NameB6Ng01-135O15
Chromosome7 (Build37)
Map Location 62,852,016 - 62,852,951
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC622146, Luzp2, LOC668796
Downstream geneSiglech, Tubgcp5, Cyfip1, Nipa2, Nipa1, LOC672959, Herc2, p
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-135O15.bB6Ng01-135O15.g
ACCDH935834DH935835
length1,1591,055
definitionDH935834|Mus musculus domesticus DNA, BAC clone: B6Ng01-135O15, 5' end.DH935835|Mus musculus domesticus DNA, BAC clone: B6Ng01-135O15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactttacatcccagttgctatcctcttcctgattccctctcata
cagtcctttccctcccctctccccttctcctctgagagggtggaggcccc
ctctgggcatccctcctcccaggcacatcaagtctttacaggactaggca
catcctctcttactgagaccagacatggcaagcccagttagggtaacata
ttccatagatagacaacagctttagggaccagcttttgcacacactctag
ttgttggaggacccacatgaagaccaaactgcacatctgctatatatgtg
cagggggcctaggtccagtatgctctttggttggtggttcagtcccttag
agctcacaagtttccaggttagttgactctgttggtcttcctgtggagtt
tttaatccccttcagggccctcaattcttcccccaactcttctataagag
tacctgaactcctttcaatgtttgactgtatgtctctgcatctgtattag
tcagctgctgggtggagtctctcagaggacagtgatgctaggcttctgcc
tacaagcataacaaaatattgttaatagtttaagggattagtgctttccc
atgggatatatcttaagttggaccagtcatcggttggccattccttccat
aaattctaggttgaaagttttgtgggtgagttgctgtccttatctctcta
ctgggagttttgcctggccacagaaggtggctacttcaggctccatctcc
tccagtcttaggagtcacagctagagtcactcccatagactccctggggc
cttgccccatcccagtgccaaggaccagcctcgccttgggattgggtcct
gaggaaggtgtttaggagcggtggaagaacaactcaaagtcaatgatggg
ctgcaagttgacagctctgttgtctgcttgctagatcgctctctaggtag
ctcagaagccagttagaagattgcaaaaaattgtttagccctctgatagc
ttttgggtttcattcaagttcttgaaactactagcaactcttgaggaatg
tgttagctctcttagataagctctgattcacaagtagaaactggcaagaa
atctagaagcggaaatagcttcttgatagtccagcctctacataccaaga
acagtcttc
gaattccaggtaaaatatatttctaggcattgggacctaacatttaggaa
tgaggatgggctagaagggtggacctgagggtgtcaacagaagggaggaa
aacaggattttcaccaggatttgttcagtcaccctggaaatgaggccaga
gaggaaggaggggccacatcatttaatctgctacatagatggcagtgaga
ctggggtattggatctgtaacagaggagaaagagtaaaaactgaagtttg
cttgccagctttccttgcctacttgctgctggtgggttcccagatagctt
cctagagttgggggctaggacaacaggatgagcaatgggtagcagggagt
tagaggaaaagatatgcatgatctgttggagatgggggcagataggaaga
ggagggcacagcaggtgttccactacagagatgaggatgagacttgggga
ctggattttgaggagaggagagaatggtaaatatctacaattagcctgta
cctttctctggccagcatggtcagcaggctcccagggaatgcttgcagag
tcggtggctgagacaatgagatgagtagggaggaatgttgcagaagatct
gtgtgctccactggagatatttcaaaattcttccaatctttgaaaaatga
gcccttacctgacagggaaacctactttaaaaaagaatgctaactgatac
tccaccactggtaaaatgagccagttcaggccagattagattatattaaa
ggcaggtttattgagagactgctctcagcaggtgatttcactagccccaa
ggacaaaaggaaggtggagtagaggaagaagagaaaaagaaagggtcaca
tgcccaattgagagaagagagaaagagaggatagaagagtgagagaagag
agggagagagagagagagacagatagagatagtgagcatagagaaaaata
cagagaataaagcacaaaatgtttggattatatttggaagaccttctgga
aaacgggctggctcagtttccttaactagaacgtttcaaggtgggggaca
gggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_62852016_62852951
seq2: B6Ng01-135O15.g_188_1122

seq1  TTGTTCAGTCACCCTGGAAATGAGGCCAGAGAGGAAGGAGGGGCCACATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCAGTCACCCTGGAAATGAGGCCAGAGAGGAAGGAGGGGCCACATC  50

seq1  ATTTAATCTGCTACATAGATGGCAGTGAGACTGGGGTATTGGATCTGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATCTGCTACATAGATGGCAGTGAGACTGGGGTATTGGATCTGTAA  100

seq1  CAGAGGAGAAAGAGTAAAAACTGAAGTTTGCTTGCCAGCTTTCCTTGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGAGAAAGAGTAAAAACTGAAGTTTGCTTGCCAGCTTTCCTTGCCT  150

seq1  ACTTGCTGCTGGTGGGTTCCCAGATAGCTTCCTAGAGTTGGGGGCTAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCTGCTGGTGGGTTCCCAGATAGCTTCCTAGAGTTGGGGGCTAGGA  200

seq1  CAACAGGATGAGCAATGGGTAGCAGGGAGTTAGAGGAAAAGATATGCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGGATGAGCAATGGGTAGCAGGGAGTTAGAGGAAAAGATATGCATG  250

seq1  ATCTGTTGGAGATGGGGGCAGATAGGAAGAGGAGGGCACAGCAGGTGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTGGAGATGGGGGCAGATAGGAAGAGGAGGGCACAGCAGGTGTTC  300

seq1  CACTACAGAGATGAGGATGAGACTTGGGGACTGGATTTTGAGGAGAGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACAGAGATGAGGATGAGACTTGGGGACTGGATTTTGAGGAGAGGAG  350

seq1  AGAATGGTAAATATCTACAATTAGCCTGTACCTTTCTCTGGCCAGCATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGGTAAATATCTACAATTAGCCTGTACCTTTCTCTGGCCAGCATGG  400

seq1  TCAGCAGGCTCCCAGGGAATGCTTGCAGAGTCGGTGGCTGAGACAATGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAGGCTCCCAGGGAATGCTTGCAGAGTCGGTGGCTGAGACAATGAG  450

seq1  ATGAGTAGGGAGGAATGTTGCAGAAGATCTGTGTGCTCCACTGGAGATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTAGGGAGGAATGTTGCAGAAGATCTGTGTGCTCCACTGGAGATAT  500

seq1  TTCAAAATTCTTCCAATCTTTGAAAAATGAGCCCTTACCTGACAGGGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAATTCTTCCAATCTTTGAAAAATGAGCCCTTACCTGACAGGGAAA  550

seq1  CCTACTTTAAAAAAGAATGCTAACTGATACTCCACCACTGGTAAAATGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTTTAAAAAAGAATGCTAACTGATACTCCACCACTGGTAAAATGAG  600

seq1  CCAGTTCAGGCCAGATTAGATTATATTAAAGGCAGGTTTATTGAGAGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTCAGGCCAGATTAGATTATATTAAAGGCAGGTTTATTGAGAGACT  650

seq1  GCTCTCAGGCAGGTGAATTCACTAGCCCCAAGGAC-AAAGGAAGGTGGAG  699
      ||||||| |||||||| |||||||||||||||||| ||||||||||||||
seq2  GCTCTCA-GCAGGTGATTTCACTAGCCCCAAGGACAAAAGGAAGGTGGAG  699

seq1  TAGAGGAAGAAGAGAAAAAGAAAGGGTCACATGCACAA-TGAGAGAAGAG  748
      |||||||||||||||||||||||||||||||||| ||| |||||||||||
seq2  TAGAGGAAGAAGAGAAAAAGAAAGGGTCACATGCCCAATTGAGAGAAGAG  749

seq1  AGAAAAGAAGAGGAGTAGAAAGAGTGAGAGAAAGAGAGGGAGAGAGAGAG  798
      |||||   |||||| ||| ||||||||||| |||||||||||||||||||
seq2  AGAAA--GAGAGGA-TAG-AAGAGTGAGAG-AAGAGAGGGAGAGAGAGAG  794

seq1  AGAGACAGAGAGAGAGAGAGAGGCAGAGAGAGAGAGACAGAG-AGAGAGC  847
      ||||||||| ||||| || || ||| ||||| | | |||||| | | |||
seq2  AGAGACAGATAGAGATAGTGA-GCATAGAGAAAAATACAGAGAATAAAGC  843

seq1  ACAAAATGTCTGGATTATATATGGAAGAGCCTCTGGAAGACGGGCT-GCC  896
      ||||||||| |||||||||| ||||||| | ||||||| ||||||| || 
seq2  ACAAAATGTTTGGATTATATTTGGAAGACCTTCTGGAAAACGGGCTGGCT  893

seq1  CAG-TCCCTAGACTAGAACG-TTCAAGGTTGGGGACAGGGTA  936
      ||| | |||  ||||||||| |||||||| |||||||||| |
seq2  CAGTTTCCTTAACTAGAACGTTTCAAGGTGGGGGACAGGGGA  935