BAC Information

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BAC

Clone NameB6Ng01-136J03
Chromosome7 (Build37)
Map Location 21,487,734 - 21,488,783
singlet/doubletsinglet
Overlap geneEG667292
Upstream genePvr, 2210010C17Rik, EG243872, Ceacam20, Nlrp9b, EG667040, EG667067, LOC620401, V1rd21, EG620537, LOC100043519, EG620574, LOC100043523, EG545926, LOC100043528, LOC100042964, LOC100042966, LOC100043533, EG435949, LOC100043536, LOC100042968, LOC100042971, EG667129, EG667135, EG435946, LOC100042976, LOC100043550, LOC667156, LOC673977, LOC667166, LOC100042980, EG381936, LOC100043559, LOC667311, LOC100043561, LOC667302
Downstream geneLOC100043566, LOC100043569, EG436135, LOC100042996, EG667273, EG667268, EG667262, EG667259, LOC100043574, LOC100043576, Gm1447, LOC100043006, LOC100043583, EG435953, LOC673902, EG667240, EG435951, Gm1446, LOC381937, LOC100043588, LOC670764, EG667215, LOC100043013, LOC621561, EG667199, EG621510, LOC667186, EG628475, LOC100043595, LOC100043596, LOC667358, LOC100043016, LOC100043602, LOC100043604, EG667378
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136J03.bB6Ng01-136J03.g
ACCDH936310DH936311
length1,0451,045
definitionDH936310|Mus musculus domesticus DNA, BAC clone: B6Ng01-136J03, 5' end.DH936311|Mus musculus domesticus DNA, BAC clone: B6Ng01-136J03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacccaaggaataccgaatgactgagaaacacctgaaaaatgt
tcagcatccttaatcatcggggaaatgcaaatcaaaacaaccctgagatt
ccatctcacaccagtcagaatggctaagatcattcaggtgacagcagatg
ctggtgaggatgtggagaaagaggaacactcctccattgttggtgggatt
gcaagcttgtataaccactctggaaatcagtctggtggtttctcagaaaa
ttgaacatggtactaccggaggatcctgcaatacctctcctgggcatata
tccagaagatattccaactagtaagaaagaaacatgctccactctgttca
tagcagccttatttataacagccagaagatggaaagaacccagatgcccc
tcagcagagaatggataccgaaaatgcggtatacttacagaatcgagtac
tactcagctattaaacagaatgcttttatgaaattcctaggcaaatgaat
ggacctggagggcatcatcctgagtgaggtaactcaatcacaaaagaact
cacatgatatgtactgtctgataagtggatattagtccagaagctagaat
actcacgatacaagattcaaagaacatgaaactcaagaagaacgaaaatc
aaagtgtggacactttgcgccttctcagaattgggaacaaaacacccatg
gaaggagttacaaatcaaagtttgaagctgagacaaaaggatggactatc
tagagattaccatatccgggaatccatcccataatcagcttccaaacact
gacaccattgcatacactaggaagattttgcttaaaggaccctgatatag
ctgtctcttgtgagactattccagggcctagcaaacagagaaatgaatgc
tcgcagtcagctattgggatggatcacaggcctccattgaagagctgaag
aagtaccctatggagtttaatgaatctgcagctctataggggaaataaca
gttattaactaccagacccccccggagcctgggtctcttgcttca
gaattcaattacacaattttaatattagcaatcttacatgttattctgat
acacataatttttaatatgttgctataacataaggaaattcaattaatag
tttttatgctgcatttatatattgttttatttttaatgatttagttatat
cccaattgaagcctcccctccctcctaattgtattgaattctgatgatgg
gatcacatgttcaaattactctctttcctgtctgtattcatatgcaagaa
ccaatgtgtgttaaaattgtgttattgtgttcttgagctactggaccaat
aaatttttagttgcattacaaaatttatctcaaggccagagtaataaaat
caggataaaattttatttgagttattatatatacattgttttccaggcaa
tttacctgtagtgtgatagaatagtgtctcacttatcaagtgaagaaatt
gtgtcaaatcaattggtaagtgtggacaataaaacagagaccctagaaga
gtagtgtccgacctaatcatcactccagggtcctgtaaagccctctccat
gtctgttcatgataaatccgtgaaaaccactgaggaagtggctcttcagc
tcctcttgctttgccagtttggggttgggactgtggccaatgtctttctg
tttgtccataatttctctccagtcttgactggttataaacagagacccag
acaggtgattttaagccacatggctgtggccaatgccttgactctattcc
tcactatatttccaaacaacattgatggctttttgctcccaaaactcctc
caaatgactcaaatgtaattagaatcccttcagtcgcctggtggcaagaa
gaaaaacttgtgttccacctgtgtcctgagtatccaatcagttttgtcac
tctttttcctctttagtagaagtaaaggtaacttattatcagaagcaagt
gtccatatttggcgagttattcttggtaacagtgttggttttcaggctta
agtaacatccacattccaatagggcatggtccacagatacagaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_21487734_21488783
seq2: B6Ng01-136J03.g_64_1108 (reverse)

seq1  TGTCTGTTATCTGTGGACCAGTGACCCTAATTGGAATGTGGATGTTACTT  50
      |||||| ||||||||||||| || |||| |||||||||||||||||||||
seq2  TGTCTG-TATCTGTGGACCA-TG-CCCT-ATTGGAATGTGGATGTTACTT  46

seq1  AAGACACTGAAAAACCAACAACTG-TAACAAGAATAACTCGCCAAATTTT  99
      |||   ||| ||||||||| |||| || |||||||||||||||||| | |
seq2  AAG--CCTG-AAAACCAAC-ACTGTTACCAAGAATAACTCGCCAAA-TAT  91

seq1  GGACACTTGC-TCTGAGTATAAGTTTACCTTTACCTCTACT-AAGAGGAA  147
      |||||||||| |||||  ||||| |||||||||| |||||| ||||||||
seq2  GGACACTTGCTTCTGATAATAAG-TTACCTTTACTTCTACTAAAGAGGAA  140

seq1  AAAGAGTGAC-AAACTGA-TGGATACTCAGGACACAGGTGGAACACAAGT  195
      |||||||||| ||||||| |||||||||||||||||||||||||||||||
seq2  AAAGAGTGACAAAACTGATTGGATACTCAGGACACAGGTGGAACACAAGT  190

seq1  TTGTGCTTCTTGCCACCAGGCGACTGAA-GGATTCTAATTTACATTTGAG  244
      || | ||||||||||||||||||||||| ||||||||| |||||||||||
seq2  TT-TTCTTCTTGCCACCAGGCGACTGAAGGGATTCTAA-TTACATTTGAG  238

seq1  TTCATTTGGAGGAGTTTTGGGAGC-AAAAGCCATC-ATGTTGTTTGGAAA  292
       ||||||||||||||||||||||| |||||||||| ||||||||||||||
seq2  -TCATTTGGAGGAGTTTTGGGAGCAAAAAGCCATCAATGTTGTTTGGAAA  287

seq1  TATAGTGAGGAATAGAGTCAAGGCATTGGCCACAGCCATGTGGCTTAAAA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTGAGGAATAGAGTCAAGGCATTGGCCACAGCCATGTGGCTTAAAA  337

seq1  TCACCTGTCTGGGTCTCTGTTTATAACCAGTCAAGACTGGAGAGAAATTA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTGTCTGGGTCTCTGTTTATAACCAGTCAAGACTGGAGAGAAATTA  387

seq1  TGGACAAACAGAAAGACATTGGCCACAGTCCCAACCCCAAACTGGCAAAG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAAACAGAAAGACATTGGCCACAGTCCCAACCCCAAACTGGCAAAG  437

seq1  CAAGAGGAGCTGAAGAGCCACTTCCTCAGTGGTTTTCACGGATTTATCAT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGGAGCTGAAGAGCCACTTCCTCAGTGGTTTTCACGGATTTATCAT  487

seq1  GAACAGACATGGAGAGGGCTTTACAGGACCCTGGAGTGATGATTAGGTCG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGACATGGAGAGGGCTTTACAGGACCCTGGAGTGATGATTAGGTCG  537

seq1  GACACTACTCTTCTAGGGTCTCTGTTTTATTGTCCACACTTACCAATTGA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTACTCTTCTAGGGTCTCTGTTTTATTGTCCACACTTACCAATTGA  587

seq1  TTTGACACAATTTCTTCACTTGATAAGTGAGACACTATTCTATCACACTA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACACAATTTCTTCACTTGATAAGTGAGACACTATTCTATCACACTA  637

seq1  CAGGTAAATTGCCTGGAAAACAATGTATATATAATAACTCAAATAAAATT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTAAATTGCCTGGAAAACAATGTATATATAATAACTCAAATAAAATT  687

seq1  TTATCCTGATTTTATTACTCTGGCCTTGAGATAAATTTTGTAATGCAACT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCTGATTTTATTACTCTGGCCTTGAGATAAATTTTGTAATGCAACT  737

seq1  AAAAATTTATTGGTCCAGTAGCTCAAGAACACAATAACACAATTTTAACA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTTATTGGTCCAGTAGCTCAAGAACACAATAACACAATTTTAACA  787

seq1  CACATTGGTTCTTGCATATGAATACAGACAGGAAAGAGAGTAATTTGAAC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTGGTTCTTGCATATGAATACAGACAGGAAAGAGAGTAATTTGAAC  837

seq1  ATGTGATCCCATCATCAGAATTCAATACAATTAGGAGGGAGGGGAGGCTT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGATCCCATCATCAGAATTCAATACAATTAGGAGGGAGGGGAGGCTT  887

seq1  CAATTGGGATATAACTAAATCATTAAAAATAAAACAATATATAAATGCAG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGGGATATAACTAAATCATTAAAAATAAAACAATATATAAATGCAG  937

seq1  CATAAAAACTATTAATTGAATTTCCTTATGTTATAGCAACATATTAAAAA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAAACTATTAATTGAATTTCCTTATGTTATAGCAACATATTAAAAA  987

seq1  TTATGTGTATCAGAATAACATGTAAGATTGCTAATATTAAAATTGTGTAA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTGTATCAGAATAACATGTAAGATTGCTAATATTAAAATTGTGTAA  1037

seq1  TTGAATTC  1050
      ||||||||
seq2  TTGAATTC  1045