BAC Information

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BAC

Clone NameB6Ng01-136O15
Chromosome7 (Build37)
Map Location 7,207,389 - 7,329,755
singlet/doubletdoublet
Overlap gene6430701C03Rik, Clcn4-2, V2r15, LOC100041866, LOC100042577
Upstream geneEG627821, Zfp667, Zfp583, LOC100042467, LOC100042459, Zfp78, Zfp28, LOC100042450, Olfr1344, GA_x5J8B7W3DQU-679632-679375, Olfr1336, Olfr1346, Olfr5, Olfr1347, Olfr1348, Olfr1349, LOC665328, Olfr1350, Zim2, Zim1, Peg3, Usp29, LOC627961, Aurkc, LOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik, Vmn2r-ps35, Zfp418, BC023179
Downstream geneVmn2r31, Vmn2r-ps36, V2r5, LOC100041883, EG628117, Vmn2r33, LOC665470, EG665474, EG628368, LOC100042636, LOC665485, EG625353, Vmn2r-ps40, Vmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688, LOC100042695
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136O15.bB6Ng01-136O15.g
ACCDH936563DH936564
length5931,077
definitionDH936563|Mus musculus domesticus DNA, BAC clone: B6Ng01-136O15, 5' end.DH936564|Mus musculus domesticus DNA, BAC clone: B6Ng01-136O15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,207,389 - 7,207,981)(7,328,668 - 7,329,755)
sequence
gaattcaaaccatctcactatgtttatcctgattttattttccatcacat
tgttttgttagaaattagccctgtattattactatttattatttttagta
catttacataatggagcattactcagctattaaaaagaatgaatttatga
aattcctaggcaaatggatggacctggaggctatcatcctgagtgaggta
tcccaatcacaaaggaactcacaatttgtactcactgagaagtggatatt
atcccagaaacttaggatacccaagatataagatacaatttgtgaaacac
atgaaactcaagaagaacgaagaccaaagtgtggacactttgccacttct
tagaattgggaacaaaagacccatggaaggagttacagtgacaaagtttg
gagctgtgtcaaaaggatggactatctaaaacctgccttatccagggttc
catcccataatcagcttccaaacgctgacaccattgcatatactagcaag
attttgctgaaaggacccagatatagctgtctcttgtgagactatgctgg
ggcctagcaaacacagaagtggatgctcacagtcagttattgg
gaattcaatgctaacagggtctacagacagagttccatggacagccaggg
agggctacatggagagatcctgcctcaaacaacaacaaaaacaacacaac
ttcaaacaaaaatacaatgacggtcagaagacataacactctagcacgtt
ggttctcaacatgtggatcatgatctcttaggggatatgtaagaccatca
ggaaacacagatatttacactaagattcatgacagtagtgaaactacagt
tatgaggtagaaatgatcatttatggctgggggtcaccataacaagagga
actgtgataaagggtcctaggattagaaagagtgagcaccactactcttg
cacatggttgcctaaagtagaaattcagcataagtgatatgataaggggg
aaagcagctacataaatttaatcgtctgaatcgacatggtaggtgaaaaa
aagtgacttttccaaattgtactctgacttgcataagtgtagggacatac
acacgcacacaccttttttaggtgagtaagaactcatgaatttattgtct
tcattacaaaatcagcatagaactagatcactgtgcattggtgtttgcta
catctctgtctgcatctgtctctttgtctctctctgtctctcagtcactc
tggttggtttgttttttgtttgctttttgagacagggtttctctgtgtag
ctctggctgtcctgaaactcactctgtagtccaggctggccttgaacttt
atcatctgcctgacatgtgtgccactgccacacggctgcaaacaaaatct
ttataagagtaaaattaataaataaataggactgtaagactggatcacta
tcagggacatcagccctctgcctgggcttaggacccacacaccaggtgct
gcaacaccaggtaagctagaattctctgctacacatcagcatcacagtca
gcagacagggatgtccagagggcacatgatagggcgtttgtacccagctt
agaccagtaattgtgtgtgcagacttagactgtatcagctcagggaattc
tttctctctccttccttcttctccctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_7207389_7207981
seq2: B6Ng01-136O15.b_50_642

seq1  GAATTCAAACCATCTCACTATGTTTATCCTGATTTTATTTTCCATCACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACCATCTCACTATGTTTATCCTGATTTTATTTTCCATCACAT  50

seq1  TGTTTTGTTAGAAATTAGCCCTGTATTATTACTATTTATTATTTTTAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTTAGAAATTAGCCCTGTATTATTACTATTTATTATTTTTAGTA  100

seq1  CATTTACATAATGGAGCATTACTCAGCTATTAAAAAGAATGAATTTATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTACATAATGGAGCATTACTCAGCTATTAAAAAGAATGAATTTATGA  150

seq1  AATTCCTAGGCAAATGGATGGACCTGGAGGCTATCATCCTGAGTGAGGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTAGGCAAATGGATGGACCTGGAGGCTATCATCCTGAGTGAGGTA  200

seq1  TCCCAATCACAAAGGAACTCACAATTTGTACTCACTGAGAAGTGGATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATCACAAAGGAACTCACAATTTGTACTCACTGAGAAGTGGATATT  250

seq1  ATCCCAGAAACTTAGGATACCCAAGATATAAGATACAATTTGTGAAACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAGAAACTTAGGATACCCAAGATATAAGATACAATTTGTGAAACAC  300

seq1  ATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCACTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCACTTCT  350

seq1  TAGAATTGGGAACAAAAGACCCATGGAAGGAGTTACAGTGACAAAGTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTGGGAACAAAAGACCCATGGAAGGAGTTACAGTGACAAAGTTTG  400

seq1  GAGCTGTGTCAAAAGGATGGACTATCTAAAACCTGCCTTATCCAGGGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGTGTCAAAAGGATGGACTATCTAAAACCTGCCTTATCCAGGGTTC  450

seq1  CATCCCATAATCAGCTTCCAAACGCTGACACCATTGCATATACTAGCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCATAATCAGCTTCCAAACGCTGACACCATTGCATATACTAGCAAG  500

seq1  ATTTTGCTGAAAGGACCCAGATATAGCTGTCTCTTGTGAGACTATGCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCTGAAAGGACCCAGATATAGCTGTCTCTTGTGAGACTATGCTGG  550

seq1  GGCCTAGCAAACACAGAAGTGGATGCTCACAGTCAGTTATTGG  593
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTAGCAAACACAGAAGTGGATGCTCACAGTCAGTTATTGG  593

seq1: chr7_7328668_7329755
seq2: B6Ng01-136O15.g_68_1144 (reverse)

seq1  GAGGGAGAAG---------GAGAAAAGGATTTCCCCTGGAGCTGATACAG  41
      ||||||||||         |||| || || |||||   ||||||||||| 
seq2  GAGGGAGAAGAAGGAAGGAGAGAGAAAGAATTCCC--TGAGCTGATACA-  47

seq1  GTCTAAAGTCTGCACCACCACAATATAACTGGTCTAAGCCTTGGGTACAA  91
      |||| |||||||||    ||||  || ||||||||||||  |||||||||
seq2  GTCT-AAGTCTGCA----CACACAATTACTGGTCTAAGC--TGGGTACAA  90

seq1  ACGCCCCTATTCATGTGCCCCTCTGGACATCCCTGTCTGCTGGCCTGTTG  141
      ||| ||||| ||||||| ||||||||||||||||||||||| | ||| ||
seq2  ACG-CCCTA-TCATGTG-CCCTCTGGACATCCCTGTCTGCT-GACTG-TG  135

seq1  ATGCTGGATGTGGTAGCAGAGAATTCTTAGCTTACCTGGTTGTTGCAGCA  191
      ||||| ||||| |||||||||||||| |||||||||||| ||||||||||
seq2  ATGCT-GATGT-GTAGCAGAGAATTC-TAGCTTACCTGG-TGTTGCAGCA  181

seq1  CCCTGGTGTGTGGGTCCTAAGCCCAGGCAGAGGGCTGATGTCCCTGATAG  241
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -CCTGGTGTGTGGGTCCTAAGCCCAGGCAGAGGGCTGATGTCCCTGATAG  230

seq1  TGATCCAGTCTTACAGTCCTATTTATTTATTAATTTTACTCTTATAAAGA  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCAGTCTTACAGTCCTATTTATTTATTAATTTTACTCTTATAAAGA  280

seq1  TTTTGTTTGCAGCCGTGTGGCAGTGGCACACATGTCAGGCAGATGATAAA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTGCAGCCGTGTGGCAGTGGCACACATGTCAGGCAGATGATAAA  330

seq1  GTTCAAGGCCAGCCTGGACTACAGAGTGAGTTTCAGGACAGCCAGAGCTA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAGGCCAGCCTGGACTACAGAGTGAGTTTCAGGACAGCCAGAGCTA  380

seq1  CACAGAGAAACCCTGTCTCAAAAAGCAAACAAAAAACAAACCAACCAGAG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGAAACCCTGTCTCAAAAAGCAAACAAAAAACAAACCAACCAGAG  430

seq1  TGACTGAGAGACAGAGAGAGACAAAGAGACAGATGCAGACAGAGATGTAG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGAGAGACAGAGAGAGACAAAGAGACAGATGCAGACAGAGATGTAG  480

seq1  CAAACACCAATGCACAGTGATCTAGTTCTATGCTGATTTTGTAATGAAGA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACCAATGCACAGTGATCTAGTTCTATGCTGATTTTGTAATGAAGA  530

seq1  CAATAAATTCATGAGTTCTTACTCACCTAAAAAAGGTGTGTGCGTGTGTA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAATTCATGAGTTCTTACTCACCTAAAAAAGGTGTGTGCGTGTGTA  580

seq1  TGTCCCTACACTTATGCAAGTCAGAGTACAATTTGGAAAAGTCACTTTTT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCTACACTTATGCAAGTCAGAGTACAATTTGGAAAAGTCACTTTTT  630

seq1  TTCACCTACCATGTCGATTCAGACGATTAAATTTATGTAGCTGCTTTCCC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCTACCATGTCGATTCAGACGATTAAATTTATGTAGCTGCTTTCCC  680

seq1  CCTTATCATATCACTTATGCTGAATTTCTACTTTAGGCAACCATGTGCAA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATCATATCACTTATGCTGAATTTCTACTTTAGGCAACCATGTGCAA  730

seq1  GAGTAGTGGTGCTCACTCTTTCTAATCCTAGGACCCTTTATCACAGTTCC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGTGGTGCTCACTCTTTCTAATCCTAGGACCCTTTATCACAGTTCC  780

seq1  TCTTGTTATGGTGACCCCCAGCCATAAATGATCATTTCTACCTCATAACT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTATGGTGACCCCCAGCCATAAATGATCATTTCTACCTCATAACT  830

seq1  GTAGTTTCACTACTGTCATGAATCTTAGTGTAAATATCTGTGTTTCCTGA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTTCACTACTGTCATGAATCTTAGTGTAAATATCTGTGTTTCCTGA  880

seq1  TGGTCTTACATATCCCCTAAGAGATCATGATCCACATGTTGAGAACCAAC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTTACATATCCCCTAAGAGATCATGATCCACATGTTGAGAACCAAC  930

seq1  GTGCTAGAGTGTTATGTCTTCTGACCGTCATTGTATTTTTGTTTGAAGTT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAGAGTGTTATGTCTTCTGACCGTCATTGTATTTTTGTTTGAAGTT  980

seq1  GTGTTGTTTTTGTTGTTGTTTGAGGCAGGATCTCTCCATGTAGCCCTCCC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGTTTTTGTTGTTGTTTGAGGCAGGATCTCTCCATGTAGCCCTCCC  1030

seq1  TGGCTGTCCATGGAACTCTGTCTGTAGACCCTGTTAGCATTGAATTC  1088
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTCCATGGAACTCTGTCTGTAGACCCTGTTAGCATTGAATTC  1077