BAC Information

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BAC

Clone NameB6Ng01-137I17
Chromosome7 (Build37)
Map Location 152,344,987 - 152,504,225
singlet/doubletdoublet
Overlap gene1810010D01Rik, LOC100040049, Tpcn2, Mrgprf, Mrgprd
Upstream geneShank2, Cttn, Ppfia1, Fadd, Tmem16a, LOC669079, LOC677315, Fgf3, Fgf4, Fgf15, Oraov1, Ccnd1
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137I17.bB6Ng01-137I17.g
ACCDH937037DH937038
length2771,042
definitionDH937037|Mus musculus domesticus DNA, BAC clone: B6Ng01-137I17, 5' end.DH937038|Mus musculus domesticus DNA, BAC clone: B6Ng01-137I17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(152,503,949 - 152,504,225)(152,344,987 - 152,346,041)
sequence
cctgccctttcctagcatggtcttatcaaaaaagatggaaaggaagccaa
gatgggaccaaggaaagaaaggggctttggagagaggggaacctgtatct
gaaccaaaacagacagtttttgttttgtttctgggacagggtctcatgta
gcccaggctagcctcaaactccctgtgtagctgagggtaaacttaaattt
tttgtttttatttcagttatttgtttgtttatttttatgtgctagaacat
gcatgtgtgtgtgtgtgtgtgtgtgtg
gaattctgctgccctggcaagaaatggggcttctcacggtgtcactacct
atgtgcacaaagagagaggcagggaggaagtcagtggagcacaccatggt
gtgagggggtaggatacaagcctgatccaatgcattttgcctaaatccac
tttgagtcatgtctcctgtctctgaccaacattactcttaggtatggaga
agttaactcaaatcccagtggcctctgcctggcatgcccatcagggctgc
cactggtcttccacatggcagccggctgtgcctctctccccaggctgctc
agagtgaggggtgtaatttatggtaggaagctcttaacagcatgggtgct
ttgggagagcctgtgacaataggcataaagccggcatttaaccagtgtga
atggagcctagatttactgtctgggccagacgggatttttgtccacaagt
catctcggagtacattgaccactaaaggcttcaacagaagacgaggacca
aacaaaggaagtcaattttaaaaggaactttgtcaaggaggtttagatgt
ccaccagatagaaaaggcgcggctgtcctctccggtgacagccgacctgc
ccagttgcagcagatcagagggagatgctaatgaagtcgtttgaatgcca
tttgatggacctagagaataggacccatgtccccaatcctgcagcaaggt
gaagggatcaaagaaagtggtggcctttgggtttgctgcagggacaaggc
accattgtcccagctgccttttgcagctacgaagtgtttttagatacagt
gtttaccaacagagaagtgtgttttagattgtgtttaccaatggagacgc
acagccctgctggccagtccacagagtttatgaccaggaacaaatttctt
aagaagggaaagaaaacaactcttttgagcaagctgggaagggctgttca
ggagcctcagcactgcaggctgggctcagcctaacagggggagggcacac
agcaacttgcaaacagaaggcctggcctgcacaccaggatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_152503949_152504225
seq2: B6Ng01-137I17.b_46_322 (reverse)

seq1  CACACACACACACACACACACACATGCATGTTCTAGCACATAAAAATAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACATGCATGTTCTAGCACATAAAAATAAA  50

seq1  CAAACAAATAACTGAAATAAAAACAAAAAATTTAAGTTTACCCTCAGCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAATAACTGAAATAAAAACAAAAAATTTAAGTTTACCCTCAGCTA  100

seq1  CACAGGGAGTTTGAGGCTAGCCTGGGCTACATGAGACCCTGTCCCAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGGAGTTTGAGGCTAGCCTGGGCTACATGAGACCCTGTCCCAGAAA  150

seq1  CAAAACAAAAACTGTCTGTTTTGGTTCAGATACAGGTTCCCCTCTCTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAAAAACTGTCTGTTTTGGTTCAGATACAGGTTCCCCTCTCTCCA  200

seq1  AAGCCCCTTTCTTTCCTTGGTCCCATCTTGGCTTCCTTTCCATCTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCCTTTCTTTCCTTGGTCCCATCTTGGCTTCCTTTCCATCTTTTTT  250

seq1  GATAAGACCATGCTAGGAAAGGGCAGG  277
      |||||||||||||||||||||||||||
seq2  GATAAGACCATGCTAGGAAAGGGCAGG  277

seq1: chr7_152344987_152346041
seq2: B6Ng01-137I17.g_67_1108

seq1  GAATTCTGCTGCCCTGGCAAGAAATGGGGCTTCTCACGGTGTCACTACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCTGCCCTGGCAAGAAATGGGGCTTCTCACGGTGTCACTACCT  50

seq1  ATGTGCACAAAGAGAGAGGCAGGGAGGAAGTCAGTGGAGCACACCATGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCACAAAGAGAGAGGCAGGGAGGAAGTCAGTGGAGCACACCATGGT  100

seq1  GTGAGGGGGTAGGATACAAGCCTGATCCAATGCATTTTGCCTAAATCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGGGGTAGGATACAAGCCTGATCCAATGCATTTTGCCTAAATCCAC  150

seq1  TTTGAGTCATGTCTCCTGTCTCTGACCAACATTACTCTTAGGTATGGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTCATGTCTCCTGTCTCTGACCAACATTACTCTTAGGTATGGAGA  200

seq1  AGTTAACTCAAATCCCAGTGGCCTCTGCCTGGCATGCCCATCAGGGCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAACTCAAATCCCAGTGGCCTCTGCCTGGCATGCCCATCAGGGCTGC  250

seq1  CACTGGTCTTCCACATGGCAGCCGGCTGTGCCTCTCTCCCCAGGCTGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGTCTTCCACATGGCAGCCGGCTGTGCCTCTCTCCCCAGGCTGCTC  300

seq1  AGAGTGAGGGGTGTAATTTATGGTAGGAAGCTCTTAACAGCATGGGTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGAGGGGTGTAATTTATGGTAGGAAGCTCTTAACAGCATGGGTGCT  350

seq1  TTGGGAGAGCCTGTGACAATAGGCATAAAGCCGGCATTTAACCAGTGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAGAGCCTGTGACAATAGGCATAAAGCCGGCATTTAACCAGTGTGA  400

seq1  ATGGAGCCTAGATTTACTGTCTGGGCCAGACGGGATTTTTGTCCACAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGCCTAGATTTACTGTCTGGGCCAGACGGGATTTTTGTCCACAAGT  450

seq1  CATCTCGGAGTACATTGACCACTAAAGGCTTCAACAGAAGACGAGGACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCGGAGTACATTGACCACTAAAGGCTTCAACAGAAGACGAGGACCA  500

seq1  AACAAAGGAAGTCAATTTTAAAAGGAACTTTGTCAAGGAGGTTTAGATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGGAAGTCAATTTTAAAAGGAACTTTGTCAAGGAGGTTTAGATGT  550

seq1  CCACCAGATAGAAAAGGCGCGGCTGTCCTCTCCGGTGACAGCCGACCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAGATAGAAAAGGCGCGGCTGTCCTCTCCGGTGACAGCCGACCTGC  600

seq1  CCAGTTGCAGCAGATCAGAGGGAGATGCTAATGAAGTCGTTTGAATGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTGCAGCAGATCAGAGGGAGATGCTAATGAAGTCGTTTGAATGCCA  650

seq1  TTTGATGGACCTAGAGAATAGGACCCATGTCCCCAATCCTGCAGCAAGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGGACCTAGAGAATAGGACCCATGTCCCCAATCCTGCAGCAAGGT  700

seq1  GAAGGGATCAAAGAAGGTGGTGGCCTTTGGGTTTGCTGCAGGGACAAGGC  750
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GAAGGGATCAAAGAAAGTGGTGGCCTTTGGGTTTGCTGCAGGGACAAGGC  750

seq1  ACCATTGTCCCAGCTGCCTTTTGCAGCTACGAAGTGTTTTTAGATACAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTGTCCCAGCTGCCTTTTGCAGCTACGAAGTGTTTTTAGATACAGT  800

seq1  GTTTACCAACAGAGAAGTGTGTTTTTAGATTGTGTTTACCAATGGAGACG  850
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GTTTACCAACAGAGAAGTGTG-TTTTAGATTGTGTTTACCAATGGAGACG  849

seq1  CACAGCCCTGCTGGCCCAGTCCCACAGAGTTTATGACCAGGAACAAACTT  900
      |||||||||||||| ||||| |||||||||||||||||||||||||| ||
seq2  CACAGCCCTGCTGG-CCAGT-CCACAGAGTTTATGACCAGGAACAAATTT  897

seq1  CTT-AGAAGGGAAAAGAAAACAACTCTTTTGGAGCAAGCTGGGAAAGGCC  949
      ||| ||||||| |||||||||||||||||| |||||||||||| |||| |
seq2  CTTAAGAAGGG-AAAGAAAACAACTCTTTT-GAGCAAGCTGGG-AAGGGC  944

seq1  TGTTCAAGAGCCTCAGCACTGCAGGGCTGGGCTCAGCCTAACAGGGGGGA  999
      |||||| |||||||||||||||| ||||||||||||||||||||||||  
seq2  TGTTCAGGAGCCTCAGCACTGCA-GGCTGGGCTCAGCCTAACAGGGGG--  991

seq1  GGGGCACACAGCAGCCTGGCAAAACAGAAGGCCTGGCCTGGCACACACAA  1049
       |||||||||||| | ||   |||||||||||||||||||   ||||| |
seq2  AGGGCACACAGCAACTTG--CAAACAGAAGGCCTGGCCTG---CACACCA  1036

seq1  GGATCT  1055
      ||||||
seq2  GGATCT  1042