BAC Information

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BAC

Clone NameB6Ng01-137P05
Chromosome7 (Build37)
Map Location 95,234,830 - 95,352,199
singlet/doubletdoublet
Overlap geneGrm5
Upstream geneLOC621477, Nox4, Tyr
Downstream geneCtsc, LOC100039756, Rab38, LOC100039924, LOC666598, EG621562, Tmem135
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137P05.bB6Ng01-137P05.g
ACCDH937334DH937335
length1,081903
definitionDH937334|Mus musculus domesticus DNA, BAC clone: B6Ng01-137P05, 5' end.DH937335|Mus musculus domesticus DNA, BAC clone: B6Ng01-137P05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,234,830 - 95,235,917)(95,351,586 - 95,352,199)
sequence
gaattcacataatgaatatattgaagttaccaatagaaacatcatttatt
aaacagtctccatgtgtctcttcacattatttcatgtatttttgcatatt
atcattttatagaatcaaaaccctaagccctgaattcttaatttagtagg
tttgaaatgattaggggtcctgattgttgttttgtttgtttgctcatttg
tttgttgtttgtgtttgtttttgtcaacttgacacaagtcagtgttatct
gagaagaggaaacctgaactgacaaattgcctccatcatattgccctatg
ggaaattctgtggagcattttctttattagtgattgatgtagaagatcta
gcccactatgggaagaaccatttttatgtcctaaactacataaaaaggaa
atcttggtaagctatagggagcaaatcagtaatcagtgttccaccatagt
gtctgcccctaggtttctgccttaagtttctgcctcaaattttctcagtg
atgggctatgatctataagtcaaataaattctttctcaagttgcttttta
ttataatgcttaccacagaaatagaaaaattattagtacaagtttagaca
agaacgtctgtctatatatataatgaactcaggtgatgctgaaagtactg
gtttaagaataattttataactaggtatggtggcacaagcctttcatcct
gatacttgggagttaaagacaggcagatgtctgccaaggaccagcctcag
cttgggggaaggtccttaggaaaggttttttggaagtagaggaagaaaca
actttcagtcagtgatggggtgcaaattgattggtctgttttctgcttga
gacctctctaggtatctcatgggttttctaacaaaagtcagaaaacctgc
cagacaaatttctaaaagagatgttgttgactttctagagagcttttgtt
cttgcagaccaaagcccagctttatttatatatcatttcagtcatttacc
tttttccctttgattatctcatgaatagattgtatgaccttagcccttag
tttagactactagaaccatttttatttaaat
gaattctcttcttgtttgctagattctcacatatccttgcctgggctatt
gtcgtaagcaataaatgaatgtagtaccaaattatcattgcttgagtttt
aaaaatactctttcttttttattgtgagattataatgcttcatttctcca
ttccttttcttcacctcacatcctatcacatactaggccttatacctttt
caaactcatggcctcttctttttcattaattgttgatacatgtatatgta
tatttctatatagatgaatacagcctgctcagtctgtgtaagtttttaaa
atcaatgaataagataaaaataagttgaggccataagtgcaacttccata
acataagctgtctcttttctgttctctagatcagaaaactttattcacat
ttttgtgtaatgctcatagacttggactacttccaatttaatatgtactt
ttaaccaacctatcaattttttattaagtctatgtgcttgttaggttccc
ctccccccctctttacacaaggtatggtcatctgggaaagggaaacccag
ttgaaaaaatgtttcattaactacaggtttgtctgtagggaagtttgtcc
tgggtgctgtaagaaagaaagctgagtaagccatgaggagctagacaata
agcagcacgcctccatggtttctgcgtcagttccttcctccaggtttttg
ctggggacttctcttagcaatggactatgacttggaagtgtaagccaaat
gaatacttttctacccaagttgcttttggtaagtatgttttattgcagca
atggaaaacaatctagggaacattacatagtaaattaaacaaacatgtag
acaactagtatttgccaacttctgccgtaaaattcagctacagtgtgtgg
gtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_95234830_95235917
seq2: B6Ng01-137P05.b_46_1126

seq1  GAATTCACATAATGAATATATTGAAGTTACCAATAGAAACATCATTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATAATGAATATATTGAAGTTACCAATAGAAACATCATTTATT  50

seq1  AAACAGTCTCCATGTGTCTCTTCACATTATTTCATGTATTTTTGCATATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTCTCCATGTGTCTCTTCACATTATTTCATGTATTTTTGCATATT  100

seq1  ATCATTTTATAGAATCAAAACCCTAAGCCCTGAATTCTTAATTTAGTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTTATAGAATCAAAACCCTAAGCCCTGAATTCTTAATTTAGTAGG  150

seq1  TTTGAAATGATTAGGGGTCCTGATTGTTGTTTTGTTTGTTTGCTCATTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAATGATTAGGGGTCCTGATTGTTGTTTTGTTTGTTTGCTCATTTG  200

seq1  TTTGTTGTTTGTGTTTGTTTTTGTCAACTTGACACAAGTCAGTGTTATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGTTTGTGTTTGTTTTTGTCAACTTGACACAAGTCAGTGTTATCT  250

seq1  GAGAAGAGGAAACCTGAACTGACAAATTGCCTCCATCATATTGCCCTATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGAGGAAACCTGAACTGACAAATTGCCTCCATCATATTGCCCTATG  300

seq1  GGAAATTCTGTGGAGCATTTTCTTTATTAGTGATTGATGTAGAAGATCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTCTGTGGAGCATTTTCTTTATTAGTGATTGATGTAGAAGATCTA  350

seq1  GCCCACTATGGGAAGAACCATTTTTATGTCCTAAACTACATAAAAAGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACTATGGGAAGAACCATTTTTATGTCCTAAACTACATAAAAAGGAA  400

seq1  ATCTTGGTAAGCTATAGGGAGCAAATCAGTAATCAGTGTTCCACCATAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGGTAAGCTATAGGGAGCAAATCAGTAATCAGTGTTCCACCATAGT  450

seq1  GTCTGCCCCTAGGTTTCTGCCTTAAGTTTCTGCCTCAAATTTTCTCAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCCCCTAGGTTTCTGCCTTAAGTTTCTGCCTCAAATTTTCTCAGTG  500

seq1  ATGGGCTATGATCTATAAGTCAAATAAATTCTTTCTCAAGTTGCTTTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTATGATCTATAAGTCAAATAAATTCTTTCTCAAGTTGCTTTTTA  550

seq1  TTATAATGCTTACCACAGAAATAGAAAAATTATTAGTACAAGTTTAGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATGCTTACCACAGAAATAGAAAAATTATTAGTACAAGTTTAGACA  600

seq1  AGAACGTCTGTCTATATATATAATGAACTCAGGTGATGCTGAAAGTACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACGTCTGTCTATATATATAATGAACTCAGGTGATGCTGAAAGTACTG  650

seq1  GTTTAAGAATAATTTTATAACTAGGTATGGTGGCACAAGCCTTTCATCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAGAATAATTTTATAACTAGGTATGGTGGCACAAGCCTTTCATCCT  700

seq1  GATACTTGGGAGTTAAAGACAGGCAGATGTCTGCCAAGGACCAGCCTCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTTGGGAGTTAAAGACAGGCAGATGTCTGCCAAGGACCAGCCTCAG  750

seq1  CTTGGGGGAAGGTCCTGAGGAAAGGTTTTTTGGAAGTAGAGGAAGAAACA  800
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CTTGGGGGAAGGTCCTTAGGAAAGGTTTTTTGGAAGTAGAGGAAGAAACA  800

seq1  ACTTTCAGTCAGTGATGGGGTGCAAATTGATTGGTCTGTTTTCTGCTTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCAGTCAGTGATGGGGTGCAAATTGATTGGTCTGTTTTCTGCTTGA  850

seq1  GACCTCTCTAGGTATCTCATGGGTTTTCTAACAAAAGTCAGAAAACCTGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCTCTAGGTATCTCATGGGTTTTCTAACAAAAGTCAGAAAACCTGC  900

seq1  CAGACAAATTTCTAAAAGAGATG-TGTTGACTTTCTAGAGAGC-TCTGTT  948
      ||||||||||||||||||||||| ||||||||||||||||||| | ||||
seq2  CAGACAAATTTCTAAAAGAGATGTTGTTGACTTTCTAGAGAGCTTTTGTT  950

seq1  CTTGCAGACCAAAGCCCAGCCTTTATTTATATATCAATTCAGTCATTTAC  998
      ||||||||||||||||||| |||||||||||||||| |||||||||||||
seq2  CTTGCAGACCAAAGCCCAG-CTTTATTTATATATCATTTCAGTCATTTAC  999

seq1  CTGTTTCCCTTTTGATTATCTCATGAATTAGAATTGTATGACCTTAGCCC  1048
      || |||||| ||||||||||||||||| ||| ||||||||||||||| ||
seq2  CTTTTTCCC-TTTGATTATCTCATGAA-TAG-ATTGTATGACCTTAG-CC  1045

seq1  CTTAGGTATTAGACTTACTAAGACACATTTTTATATAAAT  1088
      |||||   |||||| |||| |||  ||||||||| |||||
seq2  CTTAG--TTTAGAC-TACT-AGAACCATTTTTATTTAAAT  1081

seq1: chr7_95351586_95352199
seq2: B6Ng01-137P05.g_69_682 (reverse)

seq1  TCTTACAGCACCCAGGACAAACTTCCCTACAGACAAACCTGTAGTTAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACAGCACCCAGGACAAACTTCCCTACAGACAAACCTGTAGTTAATG  50

seq1  AAACATTTTTTCAACTGGGTTTCCCTTTCCCAGATGACCATACCTTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTTTTTCAACTGGGTTTCCCTTTCCCAGATGACCATACCTTGTGT  100

seq1  AAAGAGGGGGGGAGGGGAACCTAACAAGCACATAGACTTAATAAAAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGGGGGGGAGGGGAACCTAACAAGCACATAGACTTAATAAAAAATT  150

seq1  GATAGGTTGGTTAAAAGTACATATTAAATTGGAAGTAGTCCAAGTCTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGTTGGTTAAAAGTACATATTAAATTGGAAGTAGTCCAAGTCTATG  200

seq1  AGCATTACACAAAAATGTGAATAAAGTTTTCTGATCTAGAGAACAGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTACACAAAAATGTGAATAAAGTTTTCTGATCTAGAGAACAGAAAA  250

seq1  GAGACAGCTTATGTTATGGAAGTTGCACTTATGGCCTCAACTTATTTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGCTTATGTTATGGAAGTTGCACTTATGGCCTCAACTTATTTTTA  300

seq1  TCTTATTCATTGATTTTAAAAACTTACACAGACTGAGCAGGCTGTATTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTCATTGATTTTAAAAACTTACACAGACTGAGCAGGCTGTATTCA  350

seq1  TCTATATAGAAATATACATATACATGTATCAACAATTAATGAAAAAGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATAGAAATATACATATACATGTATCAACAATTAATGAAAAAGAAG  400

seq1  AGGCCATGAGTTTGAAAAGGTATAAGGCCTAGTATGTGATAGGATGTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCATGAGTTTGAAAAGGTATAAGGCCTAGTATGTGATAGGATGTGAG  450

seq1  GTGAAGAAAAGGAATGGAGAAATGAAGCATTATAATCTCACAATAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGAAAAGGAATGGAGAAATGAAGCATTATAATCTCACAATAAAAAA  500

seq1  GAAAGAGTATTTTTAAAACTCAAGCAATGATAATTTGGTACTACATTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGTATTTTTAAAACTCAAGCAATGATAATTTGGTACTACATTCAT  550

seq1  TTATTGCTTACGACAATAGCCCAGGCAAGGATATGTGAGAATCTAGCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGCTTACGACAATAGCCCAGGCAAGGATATGTGAGAATCTAGCAAA  600

seq1  CAAGAAGAGAATTC  614
      ||||||||||||||
seq2  CAAGAAGAGAATTC  614