BAC Information

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BAC

Clone NameB6Ng01-138O08
Chromosome7 (Build37)
Map Location 8,295,257 - 8,296,094
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041866, LOC100042577, Vmn2r31, Vmn2r-ps36, V2r5, LOC100041883, EG628117, Vmn2r33, LOC665470, EG665474, EG628368, LOC100042636, LOC665485, EG625353, Vmn2r-ps40, Vmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688
Downstream geneLOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989, LOC100041998, LOC100042009, LOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145, EG545909, LOC100042039, LOC100042781, LOC665539
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-138O08.bB6Ng01-138O08.g
ACCDH938023DH938024
length8381,170
definitionDH938023|Mus musculus domesticus DNA, BAC clone: B6Ng01-138O08, 5' end.DH938024|Mus musculus domesticus DNA, BAC clone: B6Ng01-138O08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcagattgaaaggagggacattcttctcgcttggattgactcca
gctgtgatggtttcaatgaactcaccctccaaacagtcatagacttgcat
acttgttccttattggtggaacactttggagatattaatgatgtatagcc
ttgttggaggaggtgtgtcactggggttgggctagtacatctcaaaagct
cttgccattccctgttaactctctctgcctggtactgtactatggattag
gatgtaagctctcagcaaatgttccagtgctgtgtttgcctgtatccatc
ctccctgacatggaggttacagattgaccctctgaggtgttaggcccaat
aaactccttgttatcataagttgccttggtcatggtgtctcttcacagta
atagaaaagtaattaagccactatgtcaactgttgttgctaagtgatgag
cacagtagtcggtgggacctcaaggacagactaggtatcagtagaatagg
ttcacagcctggtaccctctgaggtaggaagctcagtgggaatgacataa
ggataccaggaatacctgacaaggaggattcatataatttcaactttctg
ttgaactgttcaggactgtttatcctttgaggatgtggctgtgtacttct
cctgggaggaatgaacactgcttgatgactctcaaaagatcctgcaccag
actgtgatgtcagagatctgaacactcatgtctttgatgggtaagaccct
accatcatttatgagcatgtctagactttcgtttggtttttgttttgttt
tgttttgttttggtttggtttggtttggtttggtttgg
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttataaaattcctagccaa
ttggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccaa
tggagagctagagaagtagcctaggagctaaaggatctgcaaccctatag
tggacaacattatgagctaccagtaccctggagctcttgacttctagctg
cttttatcaagatgctagtcgcatcactggaagagagagcccatgacttg
caactttatatgccagtacgggaatacaaggcccaaagggggaatggtgt
ggcacaggagagatgggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_8295257_8296094
seq2: B6Ng01-138O08.b_48_885

seq1  GAATTCTCAGATTGAAAGGAGGGACATTCTTCTCGCTTGGATTGACTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGATTGAAAGGAGGGACATTCTTCTCGCTTGGATTGACTCCA  50

seq1  GCTGTGATGGTTTCAATGAACTCACCCTCCAAACAGTCATAGACTTGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGATGGTTTCAATGAACTCACCCTCCAAACAGTCATAGACTTGCAT  100

seq1  ACTTGTTCCTTATTGGTGGAACACTTTGGAGATATTAATGATGTATAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTTCCTTATTGGTGGAACACTTTGGAGATATTAATGATGTATAGCC  150

seq1  TTGTTGGAGGAGGTGTGTCACTGGGGTTGGGCTAGTACATCTCAAAAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGGAGGAGGTGTGTCACTGGGGTTGGGCTAGTACATCTCAAAAGCT  200

seq1  CTTGCCATTCCCTGTTAACTCTCTCTGCCTGGTACTGTACTATGGATTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCATTCCCTGTTAACTCTCTCTGCCTGGTACTGTACTATGGATTAG  250

seq1  GATGTAAGCTCTCAGCAAATGTTCCAGTGCTGTGTTTGCCTGTATCCATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTAAGCTCTCAGCAAATGTTCCAGTGCTGTGTTTGCCTGTATCCATC  300

seq1  CTCCCTGACATGGAGGTTACAGATTGACCCTCTGAGGTGTTAGGCCCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGACATGGAGGTTACAGATTGACCCTCTGAGGTGTTAGGCCCAAT  350

seq1  AAACTCCTTGTTATCATAAGTTGCCTTGGTCATGGTGTCTCTTCACAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCCTTGTTATCATAAGTTGCCTTGGTCATGGTGTCTCTTCACAGTA  400

seq1  ATAGAAAAGTAATTAAGCCACTATGTCAACTGTTGTTGCTAAGTGATGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAAGTAATTAAGCCACTATGTCAACTGTTGTTGCTAAGTGATGAG  450

seq1  CACAGTAGTCGGTGGGACCTCAAGGACAGACTAGGTATCAGTAGAATAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTAGTCGGTGGGACCTCAAGGACAGACTAGGTATCAGTAGAATAGG  500

seq1  TTCACAGCCTGGTACCCTCTGAGGTAGGAAGCTCAGTGGGAATGACATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGCCTGGTACCCTCTGAGGTAGGAAGCTCAGTGGGAATGACATAA  550

seq1  GGATACCAGGAATACCTGACAAGGAGGATTCATATAATTTCAACTTTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACCAGGAATACCTGACAAGGAGGATTCATATAATTTCAACTTTCTG  600

seq1  TTGAACTGTTCAGGACTGTTTATCCTTTGAGGATGTGGCTGTGTACTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTGTTCAGGACTGTTTATCCTTTGAGGATGTGGCTGTGTACTTCT  650

seq1  CCTGGGAGGAATGAACACTGCTTGATGACTCTCAAAAGATCCTGCACCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGAGGAATGAACACTGCTTGATGACTCTCAAAAGATCCTGCACCAG  700

seq1  ACTGTGATGTCAGAGATCTGAACACTCATGTCTTTGATGGGTAAGACCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGATGTCAGAGATCTGAACACTCATGTCTTTGATGGGTAAGACCCT  750

seq1  ACCATCATTTATGAGCATGTCTAGACTTTCGTTTGGTTTTTGTTTTGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCATTTATGAGCATGTCTAGACTTTCGTTTGGTTTTTGTTTTGTTT  800

seq1  TGTTTTGTTTTGGTTTGGTTTGGTTTGGTTTGGTTTGG  838
      ||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTTTTGGTTTGGTTTGGTTTGGTTTGGTTTGG  838