BAC Information

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BAC

Clone NameB6Ng01-139M22
Chromosome15 (Build37)7 (Build37)
Map Location 12,122,492 - 12,122,53730,324,442 - 30,325,503
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneAdamts12, Tars, LOC100039772, Npr3, LOC381002, Sub1, LOC100040027, Zfr, LOC100040052
Downstream geneLOC100040066, Mtmr12, LOC100039846, Golph3, Pdzd2, LOC100040109, 6030458C11Rik, Rnasen, Cdh6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-139M22.bB6Ng01-139M22.g
ACCDH938696DH938697
length2411,058
definitionDH938696|Mus musculus domesticus DNA, BAC clone: B6Ng01-139M22, 5' end.DH938697|Mus musculus domesticus DNA, BAC clone: B6Ng01-139M22, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(12,122,492 - 12,122,537)(30,324,442 - 30,325,503)
sequence
caaatatcacacaactgcagaaactatctgctgcaggcaaaaatcacacc
cctgctagagcacgaggcaaatcatagtcagttactgtctgcagcagccc
catatcccacacctgggaataaaatgaaaacatagttttataatagtgtt
ttttaaaaagagaccaaaattccaaaattcttacaacagagatccagctg
tctctgcctcccaagtgttgggattaaaggtgtgcaccgcc
gaattccaggccagcctggtctacaaagtgagttccaggacagccagggc
tacacagagaaaccctgtctcagaaaaaaaaaaaattgcacattgaagca
ataaaacctttaatcatttataccaatatatgcatgactatttgcaaatt
atatacttgttttgcttttacaatacatctattaaatatgactaactgga
tgctggagagagacctcaacaggtaagagcatagctagtgttttctattt
gttttgttttttgttttcctttttctttttgttttggcaaagggtttctc
tgtgtaacagcccttggccatcctggaactccctctgtagactaggctag
aatcaaactcagagatctgcctgcctctgcctccccggtgctgggactaa
agatgggtgccaccacatctgtcgagcacatgctatttctgaagagaagc
tgaattctgttgccagcagctgcatgccaacagccacctgcaattccagc
tctggggagtctgaagctccccgacttccgcaggtaccgcgctcacacat
ggtgcacataaatacataaaggtaaaaagacatgtacatgtcaaaacctt
ctgaaaattagtaacataggagctagagatgtgcagctcagggctaggat
ggatgctttccatgacaacagcatgggctcagttctcagagctagcatgc
atacctaaacttttttatgtttgttacaatttttactaatgcctttttaa
atgtttttttttatctctgtgtgtgtgatgtgcgtcttcggcaacaatgt
ctttatgaggtgtcttctggcctcaaattccttgtgtagccaagaataac
ttttttgagttcttttcctcagtaatgggattgcagcaccgttagggtct
tgtttagagacagatctggctatattacctggccaaacttgaactcacta
attacctggccggcttgattcactatgtaatcctgggcctgaactcacat
agtaactctggtcgggatttgaacaatgaacctgggccagccttgaattg
gggaaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_12122492_12122537
seq2: B6Ng01-139M22.b_254_293 (reverse)

seq1  GGCGGTGGTGGCACACGCCTTTAATCCCAGCACTTGGGAGGCAGAG  46
      |||||||      ||| |||||||||||| ||||||||||||||||
seq2  GGCGGTG------CACACCTTTAATCCCAACACTTGGGAGGCAGAG  40

seq1: chr7_30324442_30325503
seq2: B6Ng01-139M22.g_68_1125 (reverse)

seq1  GATTTCCACAAATTCAAGGCTGGCCAGGGTTACATAGTTCAAAACCAG-C  49
      ||||||| | |||||||||||||||  |||| ||| ||||||| || | |
seq2  GATTTCC-CCAATTCAAGGCTGGCCCAGGTT-CATTGTTCAAATCCCGAC  48

seq1  CAAGGTAACATAGTGAGTTCAAGGCCAGGATTACATAGTGAGTTCAAAGC  99
      ||  || ||   ||||||||| | ||||||||||||||||| |   ||||
seq2  CAGAGTTACTATGTGAGTTCAGGCCCAGGATTACATAGTGAAT--CAAGC  96

seq1  CGGCCAGGGTAATAGTGAGTTCAAGGTTGGCCAGGGTAATATAGCCAGAT  149
      ||||||||  | ||||||||||||| ||||||| ||||||||||||||| 
seq2  CGGCCAGGTAATTAGTGAGTTCAAGTTTGGCCA-GGTAATATAGCCAGA-  144

seq1  TCTGTCTCTAAACAAGGACCCTAACGGTGCTGCAATCCCATTACTTGAGG  199
      ||||||||||||||| |||||||||||||||||||||||||||| |||||
seq2  TCTGTCTCTAAACAA-GACCCTAACGGTGCTGCAATCCCATTAC-TGAGG  192

seq1  AAAAGGAACTCAAAAAAGTTATTCTTGGCTACACAAGGAATTTGAGGCCA  249
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAA-GAACTCAAAAAAGTTATTCTTGGCTACACAAGGAATTTGAGGCCA  241

seq1  GAAGACACCTCAT-AAGACATTGTTGCCGAAGACGCACATCACACACACA  298
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GAAGACACCTCATAAAGACATTGTTGCCGAAGACGCACATCACACACACA  291

seq1  GAGAT-AAAAAAAACATTT-AAAAGGCATTAGT-AAAATTGTAACAAACA  345
      ||||| ||||||||||||| ||||||||||||| ||||||||||||||||
seq2  GAGATAAAAAAAAACATTTAAAAAGGCATTAGTAAAAATTGTAACAAACA  341

seq1  TAAAAAAGTTTAGGTATGCATGCTAGCTCTGAGAACTGAGCCCATGCTGT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAGTTTAGGTATGCATGCTAGCTCTGAGAACTGAGCCCATGCTGT  391

seq1  TGTCATGGAAAGCATCCATCCTAGCCCTGAGCTGCACATCTCTAGCTCCT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATGGAAAGCATCCATCCTAGCCCTGAGCTGCACATCTCTAGCTCCT  441

seq1  ATGTTACTAATTTTCAGAAGGTTTTGACATGTACATGTCTTTTTACCTTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTACTAATTTTCAGAAGGTTTTGACATGTACATGTCTTTTTACCTTT  491

seq1  ATGTATTTATGTGCACCATGTGTGAGCGCGGTACCTGCGGAAGTCGGGGA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTTATGTGCACCATGTGTGAGCGCGGTACCTGCGGAAGTCGGGGA  541

seq1  GCTTCAGACTCCCCAGAGCTGGAATTGCAGGTGGCTGTTGGCATGCAGCT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAGACTCCCCAGAGCTGGAATTGCAGGTGGCTGTTGGCATGCAGCT  591

seq1  GCTGGCAACAGAATTCAGCTTCTCTTCAGAAATAGCATGTGCTCGACAGA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCAACAGAATTCAGCTTCTCTTCAGAAATAGCATGTGCTCGACAGA  641

seq1  TGTGGTGGCACCCATCTTTAGTCCCAGCACCGGGGAGGCAGAGGCAGGCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGGCACCCATCTTTAGTCCCAGCACCGGGGAGGCAGAGGCAGGCA  691

seq1  GATCTCTGAGTTTGATTCTAGCCTAGTCTACAGAGGGAGTTCCAGGATGG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCTGAGTTTGATTCTAGCCTAGTCTACAGAGGGAGTTCCAGGATGG  741

seq1  CCAAGGGCTGTTACACAGAGAAACCCTTTGCCAAAACAAAAAGAAAAAGG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGGCTGTTACACAGAGAAACCCTTTGCCAAAACAAAAAGAAAAAGG  791

seq1  AAAACAAAAAACAAAACAAATAGAAAACACTAGCTATGCTCTTACCTGTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAAAACAAAACAAATAGAAAACACTAGCTATGCTCTTACCTGTT  841

seq1  GAGGTCTCTCTCCAGCATCCAGTTAGTCATATTTAATAGATGTATTGTAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCTCTCTCCAGCATCCAGTTAGTCATATTTAATAGATGTATTGTAA  891

seq1  AAGCAAAACAAGTATATAATTTGCAAATAGTCATGCATATATTGGTATAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAACAAGTATATAATTTGCAAATAGTCATGCATATATTGGTATAA  941

seq1  ATGATTAAAGGTTTTATTGCTTCAATGTGCAATTTTTTTTTTTTCTGAGA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTAAAGGTTTTATTGCTTCAATGTGCAATTTTTTTTTTTTCTGAGA  991

seq1  CAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACC  1041

seq1  AGGCTGGCCTGGAATTC  1062
      |||||||||||||||||
seq2  AGGCTGGCCTGGAATTC  1058