BAC Information

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BAC

Clone NameB6Ng01-140B21
Chromosome7 (Build37)
Map Location 141,693,702 - 141,835,431
singlet/doubletdoublet
Overlap genenone
Upstream gene4930404H21Rik, LOC100043237, 2700050L05Rik, Mmp21, Uros, Bccip, Dhx32, LOC100043695, Fank1, Adam12, A130023I24Rik, 4933400E14Rik, LOC100043248, LOC100043699
Downstream geneLOC668750, Dock1, B830028B13Rik, EG668693, LOC100043254, Foxi2, Clrn3, Ptpre
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140B21.bB6Ng01-140B21.g
ACCDH938931DH938932
length1,0911,067
definitionDH938931|Mus musculus domesticus DNA, BAC clone: B6Ng01-140B21, 5' end.DH938932|Mus musculus domesticus DNA, BAC clone: B6Ng01-140B21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(141,693,702 - 141,694,800)(141,834,363 - 141,835,431)
sequence
gaattcttgacttccacagaaaagaatttcatgttgaatgaatatggggt
tagagctggagtttgtcaaggagagattgttatatgaactgaagcactag
gttaatagagagaacttttgggaaggacagtgcacacataagcattgatg
tgtgcttttcaatagatagtcgtaccagatgacttagcagtggccatatg
tattattgtggaaagtctcaagtttctaagttctaaggttgctaagaaac
cccctctccctgttttcggttgacaggataggattacattctgataacgt
gagatttgttatgagattcctaggatttagtgccagagagatggctcatg
cctggttgctcttctagaggaccagggttcaattcccaatacccacatgg
caaatcacaaccatctgtaactccagacccagaggatccaatgcccttct
ggtctccatgggaacagcactcatatggtacatatccatttgtgcagaca
aaacacctatacacataaagtaaaataatttttttaaaaaaattattcct
agaaaaattgtaggtttatatctaggaaaggcaaaaggtcatgcctggtt
gtatacatttaggccattttaacactcttatttgcaatatttctaggaaa
gaaagaaaacagtgttgtctctgtgtaggcaacttcgtagcaaattttgt
taactgaggtagaatttctgactctcagctggtgaaaggcttcagtcgca
ctccagagcaagtcattctgtctctctcagtcccctctgtcccctgcctt
ctctagtgcctcagcagcaacgccttccttcttccatggatgctgtgaag
tctggaggagaaggcataaaccaagctctcgggcagagctggctctagcg
actccagagatagctgctgtcatgctcaaagggcaaagactgaaactaag
aggtggtaaacatgttcacacttgagaggacagctgctaaagaagacaga
aactggagctggggagatggctcagtcagtcccacagcgggagtgactga
atagatcctagaatcaaataagaaactggcatatggcttga
gaattctttgttcagctctgagccccattttgggaaaggatctttaccta
tcccaaatcagatagggaactaatatccaatatatataaagaactcaaga
aggtgggctccagaaaattgataatctttttctaagtaagttgattgttt
gacaatgcacacagatatataatgtgtgttaaatatactctgactatgtc
aagtggtatcatataagggcttttgaatatatttcttttttttttttttt
ggtttttcgagacagggtttctctgtatagccctggctgtcctggaactc
actttgtagaccaggctggcctcgaactcagaaatccgcctgcctctgcc
tcccaagtgctgggattaaaggcatgtgccaccactgcccggcattgaat
atatttcttaatgattcatttttaatattttatgctcttttactatactt
aactcccaaagaccattttgtatgttttgagacaatttagtaaagaaaga
aaggaagcaagcaagcaagccaggggaagcaagccagtaagcaacatccc
tgcatggcttctgcatcagcccctgcttcctgacctgcttgtgttccagt
ctcgatttcctttggtgatgaacagcagtgtggaagtataagctgaataa
acccttcccccttccaacttgcttcttggtcaaaatgtttgtgcaggaac
agaaaccctgactaagaccattagaaaggttgggaactactgttctatat
tacttgaggtgagaagacccactctgaatgcggggcaacactgcttcatg
agctgggtcctgaaatgaccaaagatggagcaagaatgaatacccacatt
cacagctgtctgctcctccacctgcggatccaaatggtgaccagccacct
cactctcttgcttgccatcccttcccagttgtgaggactatatcttcaac
cattagcaaaagaaaccattcttgctcacttacttttgctgagtggttta
gtcaggagcacaggaatgtaggctatacaaatggtatcactggtagttat
cttactgtgtactggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_141693702_141694800
seq2: B6Ng01-140B21.b_40_1130

seq1  GAATTCTTGACTTCCACAGAAAAGAATTTCATGTTGAATGAATATGGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGACTTCCACAGAAAAGAATTTCATGTTGAATGAATATGGGGT  50

seq1  TAGAGCTGGAGTTTGTCAAGGAGAGATTGTTATATGAACTGAAGCACTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCTGGAGTTTGTCAAGGAGAGATTGTTATATGAACTGAAGCACTAG  100

seq1  GTTAATAGAGAGAACTTTTGGGAAGGACAGTGCACACATAAGCATTGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATAGAGAGAACTTTTGGGAAGGACAGTGCACACATAAGCATTGATG  150

seq1  TGTGCTTTTCAATAGATAGTCGTACCAGATGACTTAGCAGTGGCCATATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTTTCAATAGATAGTCGTACCAGATGACTTAGCAGTGGCCATATG  200

seq1  TATTATTGTGGAAAGTCTCAAGTTTCTAAGTTCTAAGGTTGCTAAGAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTGTGGAAAGTCTCAAGTTTCTAAGTTCTAAGGTTGCTAAGAAAC  250

seq1  CCCCTCTCCCTGTTTTCGGTTGACAGGATAGGATTACATTCTGATAACGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCTCCCTGTTTTCGGTTGACAGGATAGGATTACATTCTGATAACGT  300

seq1  GAGATTTGTTATGAGATTCCTAGGATTTAGTGCCAGAGAGATGGCTCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTTGTTATGAGATTCCTAGGATTTAGTGCCAGAGAGATGGCTCATG  350

seq1  CCTGGTTGCTCTTCTAGAGGACCAGGGTTCAATTCCCAATACCCACATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTTGCTCTTCTAGAGGACCAGGGTTCAATTCCCAATACCCACATGG  400

seq1  CAAATCACAACCATCTGTAACTCCAGACCCAGAGGATCCAATGCCCTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCACAACCATCTGTAACTCCAGACCCAGAGGATCCAATGCCCTTCT  450

seq1  GGTCTCCATGGGAACAGCACTCATATGGTACATATCCATTTGTGCAGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCCATGGGAACAGCACTCATATGGTACATATCCATTTGTGCAGACA  500

seq1  AAACACCTATACACATAAAGTAAAATAATTTTTTTAAAAAAATTATTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACCTATACACATAAAGTAAAATAATTTTTTTAAAAAAATTATTCCT  550

seq1  AGAAAAATTGTAGGTTTATATCTAGGAAAGGCAAAAGGTCATGCCTGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATTGTAGGTTTATATCTAGGAAAGGCAAAAGGTCATGCCTGGTT  600

seq1  GTATACATTTAGGCCATTTTAACACTCTTATTTGCAATATTTCTAGGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACATTTAGGCCATTTTAACACTCTTATTTGCAATATTTCTAGGAAA  650

seq1  GAAAGAAAACAGTGTTGTCTCTGTGTAGGCAACTTCGTAGCAAATTTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAACAGTGTTGTCTCTGTGTAGGCAACTTCGTAGCAAATTTTGT  700

seq1  TAACTGAGGTAGAATTTCTGACTCTCAGCTGGTGAAAGGCTTCAGTCGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGAGGTAGAATTTCTGACTCTCAGCTGGTGAAAGGCTTCAGTCGCA  750

seq1  CTCCAGAGCAAGTCATTCTGTCTCTCTCAGTCCCCTCTGTCCCCTGCCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGAGCAAGTCATTCTGTCTCTCTCAGTCCCCTCTGTCCCCTGCCTT  800

seq1  CTCTAGTGCCTCAGCAGCAACGCCTTCCTTCTTCCATGGATGCTGTGAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGTGCCTCAGCAGCAACGCCTTCCTTCTTCCATGGATGCTGTGAAG  850

seq1  TCTGGAGGAGAAGGCATAAACCAAGCTCTCGGGCAGAGCTGGCTCTAGCG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGGAGAAGGCATAAACCAAGCTCTCGGGCAGAGCTGGCTCTAGCG  900

seq1  ACTCCAGAGATAGCTGCTGTCATGCCCAAAGGGCAAAGACTGAAACTAAG  950
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ACTCCAGAGATAGCTGCTGTCATGCTCAAAGGGCAAAGACTGAAACTAAG  950

seq1  AGGTGGTAAACATGTTCACACTTGAGAAGGACAGCTGCTAAAG-AGACAG  999
      |||||||||||||||||||||||||| |||||||||||||||| ||||||
seq2  AGGTGGTAAACATGTTCACACTTGAG-AGGACAGCTGCTAAAGAAGACAG  999

seq1  AAACTGGAGCTGGGGAGATGGCTCAGTCAGTCCCACAAGCGGAGTGACCT  1049
      |||||||||||||||||||||||||||||||||||||   ||||||| ||
seq2  AAACTGGAGCTGGGGAGATGGCTCAGTCAGTCCCACAGCGGGAGTGA-CT  1048

seq1  GAATTAGATCCCAAGAATTCAAATAAGAAAAACTGGGCATAATGGCTTGA  1099
      ||| ||||| || |||| |||||||||  ||||| ||||| |||||||||
seq2  GAA-TAGAT-CCTAGAA-TCAAATAAG--AAACT-GGCAT-ATGGCTTGA  1091

seq1: chr7_141834363_141835431
seq2: B6Ng01-140B21.g_66_1132 (reverse)

seq1  AGCCAGT-CACAGTAAGATAAACTACAAGTGATACCATTTGTATTAGCTA  49
      ||||||| ||||||||||| |||||| |||||||||||||||||   |||
seq2  AGCCAGTACACAGTAAGAT-AACTACCAGTGATACCATTTGTATAGCCTA  49

seq1  CATTCCTGTTGCT-CTGACTAAA-CACTCAGCAAAAGTAAGTTGAGCAAG  97
      |||||||| |||| ||||||||| ||||||||||||||||| ||||||| 
seq2  CATTCCTG-TGCTCCTGACTAAACCACTCAGCAAAAGTAAG-TGAGCAA-  96

seq1  GAATGGTTTCTTTTGGCTAATGGTTTGAGATTATAGTCCTTCACAACTGG  147
      |||||||||||||| ||||||||||  ||| |||||||| ||||||||||
seq2  GAATGGTTTCTTTT-GCTAATGGTTGAAGA-TATAGTCC-TCACAACTGG  143

seq1  GAAGGGATGGC-AGCAGGAGAGTGAGGTGGCTGGTCA-CATTTGGATCCG  195
      ||||||||||| |||| |||||||||||||||||||| ||||||||||||
seq2  GAAGGGATGGCAAGCAAGAGAGTGAGGTGGCTGGTCACCATTTGGATCCG  193

seq1  CAGGTGG-GGAGCAGACAGCTGTGAATGTTGGTATTCATTCTTGCTCCAT  244
      ||||||| ||||||||||||||||||||| ||||||||||||||||||||
seq2  CAGGTGGAGGAGCAGACAGCTGTGAATGTGGGTATTCATTCTTGCTCCAT  243

seq1  CTTTTGGTCATTTCAGGACCCAGCTCATGGAGCAGTGTTGCCCCGCATTC  294
      | ||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  C-TTTGGTCATTTCAGGACCCAGCTCATGAAGCAGTGTTGCCCCGCATTC  292

seq1  AGAGTGGGTCTTCTCACCTCAAGTAATATAGAACAGTAGTTCCCAACCTT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGGGTCTTCTCACCTCAAGTAATATAGAACAGTAGTTCCCAACCTT  342

seq1  TCTAATGGTCTTAGTCAGGGTTTCTGTTCCTGCACAAACATTTTGACCAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATGGTCTTAGTCAGGGTTTCTGTTCCTGCACAAACATTTTGACCAA  392

seq1  GAAGCAAGTTGGAAGGGGGAAGGGTTTATTCAGCTTATACTTCCACACTG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAAGTTGGAAGGGGGAAGGGTTTATTCAGCTTATACTTCCACACTG  442

seq1  CTGTTCATCACCAAAGGAAATCGAGACTGGAACACAAGCAGGTCAGGAAG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCATCACCAAAGGAAATCGAGACTGGAACACAAGCAGGTCAGGAAG  492

seq1  CAGGGGCTGATGCAGAAGCCATGCAGGGATGTTGCTTACTGGCTTGCTTC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGCTGATGCAGAAGCCATGCAGGGATGTTGCTTACTGGCTTGCTTC  542

seq1  CCCTGGCTTGCTTGCTTGCTTCCTTTCTTTCTTTACTAAATTGTCTCAAA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGCTTGCTTGCTTGCTTCCTTTCTTTCTTTACTAAATTGTCTCAAA  592

seq1  ACATACAAAATGGTCTTTGGGAGTTAAGTATAGTAAAAGAGCATAAAATA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACAAAATGGTCTTTGGGAGTTAAGTATAGTAAAAGAGCATAAAATA  642

seq1  TTAAAAATGAATCATTAAGAAATATATTCAATGCCGGGCAGTGGTGGCAC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATGAATCATTAAGAAATATATTCAATGCCGGGCAGTGGTGGCAC  692

seq1  ATGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGT  742

seq1  TCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTATA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTATA  792

seq1  CAGAGAAACCCTGTCTCGAAAAACCAAAAAAAAAAAAAAAGAAATATATT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAACCCTGTCTCGAAAAACCAAAAAAAAAAAAAAAGAAATATATT  842

seq1  CAAAAGCCCTTATATGATACCACTTGACATAGTCAGAGTATATTTAACAC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGCCCTTATATGATACCACTTGACATAGTCAGAGTATATTTAACAC  892

seq1  ACATTATATATCTGTGTGCATTGTCAAACAATCAACTTACTTAGAAAAAG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATATATCTGTGTGCATTGTCAAACAATCAACTTACTTAGAAAAAG  942

seq1  ATTATCAATTTTCTGGAGCCCACCTTCTTGAGTTCTTTATATATATTGGA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCAATTTTCTGGAGCCCACCTTCTTGAGTTCTTTATATATATTGGA  992

seq1  TATTAGTTCCCTATCTGATTTGGGATAGGTAAAGATCCTTTCCCAAAATG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGTTCCCTATCTGATTTGGGATAGGTAAAGATCCTTTCCCAAAATG  1042

seq1  GGGCTCAGAGCTGAACAAAGAATTC  1069
      |||||||||||||||||||||||||
seq2  GGGCTCAGAGCTGAACAAAGAATTC  1067