BAC Information

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BAC

Clone NameB6Ng01-141J01
Chromosome7 (Build37)
Map Location 74,387,118 - 74,569,708
singlet/doubletdoublet
Overlap geneMef2a
Upstream geneLrrk1, Aldh1a3, Asb7, Lins2, Lass3, Adamts17, Lysmd4
Downstream geneEG665304, Lrrc28, Ttc23, Dmn, LOC665319, LOC100041771, Igf1r, C330024D12Rik, EG434197, LOC100041800
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141J01.bB6Ng01-141J01.g
ACCDH939992DH939993
length1,155898
definitionDH939992|Mus musculus domesticus DNA, BAC clone: B6Ng01-141J01, 5' end.DH939993|Mus musculus domesticus DNA, BAC clone: B6Ng01-141J01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,568,526 - 74,569,708)(74,387,118 - 74,388,007)
sequence
gaattctttcaaaggtcattttaataatccaaaccagccacataaccaag
aaagtattctagcctagagcagttgaaaacaccccccaccccaggtagac
gctggtttggggaatgggtaaggcatatacttttagagcctcaattccag
ataatgggatgtttctgtttgtcccttcatggcacactagctgtgggtct
tttactggacacaatcaccctacatcaagttgaataaatcataaacacaa
cacaaaagaaactcatagatgaacagggaggatgcttcactacacaacta
catcaaaggcaggaatgtagctaccagatcaaggacaaacagctaggaga
gaacagaagagagaggcggcctgtcttccaaggataaagtcatcccagta
ggtttggtccatgtcctcagattccctttcttgaggtttccacattaata
gttgccttggccaccctcgttctcacctcctcagagtggcgagagagctc
aggtaatccctagaaccactcacattcaaatgtgaagggtcagtatcagc
caattggagaactaaaactaaatcaggaactcaaggaaagacacactcag
aggaaccagagatgcccactggagcacctggatggggcagttcttcacgg
tcagcatttcaggggcgggagggacagcacagcccctcactgagcagagg
tggaaatcccagctctgagctttcttacacttgtgatgtctgtgaagatt
ctgctgggggatgaaatgggatcctacttgtgaagattcccaggcacatc
cgttgttcatagtaccaaggggccattcagaaacacaggtgaccagaatg
tagcttcctcttcggtatcatcagcaccagtgaggttcagcaggaccttg
cctggactatttagaggttggtatatgcagagaaagccacctcactcagt
ctcagagtaccccaaagccatcatgcaagtgtctctgtctcagggtgtga
tcatcagtctcctaacataatatagcacttattcgggtgctctagaatgt
ccctggaggctttgtctcatcaacaactacttgacccactcctttactca
gactatatcggacatggaagttccttgtatagcgaatatttagccacagg
cttat
gaattccagggaactgcgtttctgattcttccctgcattctgaactgatt
tcatttttagatgctgaattagcttaaacttttttaaagaacaatttttt
attagatattttcttcatttacaattcaaatgctatcccaaaagtcccct
ataccctcccaaccccctgccctgccctccaacccacccactcccacttc
ctggccctggcattaccctgtactgaggcatataaagtttgcacgaccaa
ggggcctctcttcccaatgatgtccgactaggccattttctgctacacat
gcagctagagacacgagctcagggtgtactggttagttcatattgttgtt
ccacctatagggctgcagaccccttcagctccttgggtactttctctaga
tcctccattgggggccctgttttccatccaatagctgactgtgagcatcc
acttctgtatttgccaggcactggcatagcctcacaagagacagctatat
tagggtcatgtcagcaaaatcttgctggcatatgcaatagtgtctgcatt
tggtggctgattatggtatggatgccccgggtggggcagtcgcagtctct
ggatgctccttccttccttccgtctcagctccaaactttgtctctgtaac
tccttccatgggtgttttatgaagttgtaaagagtgtgattgactacact
ttttagcgatcttttcttatctttcatgatttccacatttcaacacactc
agaaacctatctctgagattctgtcgtttagtgtcattttaaggaaggca
aagtcacacagtgtcacacattggtatgacaggtggaaaaaacagtttaa
ggcttcatcactgatgtaataatttcaatggattttttaagggagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_74568526_74569708
seq2: B6Ng01-141J01.b_48_1202 (reverse)

seq1  ATAAGCCATTGTGGCTAAATTAATTTTGAGCTAATTACATGGGAACTCCA  50
      |||||||  |||||||||||  |||    ||||  |||| || |  ||||
seq2  ATAAGCC--TGTGGCTAAAT--ATT---CGCTA--TACAAGGAACTTCCA  41

seq1  TGTCCCGTATAGCTCCTGAAGTAAAGAGTTGGGTGTCAGGTAGTGTGTTG  100
      |||||  |||||   ||| |||||||   |||  |||| ||||| |||||
seq2  TGTCCGATATAG--TCTG-AGTAAAGGAGTGG--GTCAAGTAGT-TGTTG  85

seq1  AATGGAGGCCAAAGCCTCCAGGGACAATTCTAGAAGGCACACGAATAAAG  150
      |   ||   |||||||||||||||| ||||||||  |||| ||||| |||
seq2  ATGAGA---CAAAGCCTCCAGGGAC-ATTCTAGA--GCACCCGAAT-AAG  128

seq1  TGCTATATTATGTTAGGAGACTGATGATCAACACCCCTGGAGACCAGAGA  200
      ||||||||||||||||||||||||||||| ||||||   |||| ||||||
seq2  TGCTATATTATGTTAGGAGACTGATGATC-ACACCC--TGAGA-CAGAGA  174

seq1  CACTTGCATGATGGCTTTGGGGTACTCTGGAGACTGAGTGGGGTGGCTTT  250
      |||||||||||||||||||||||||||| ||||||||||| |||||||||
seq2  CACTTGCATGATGGCTTTGGGGTACTCT-GAGACTGAGTGAGGTGGCTTT  223

seq1  CTCTGCATATACCAACCTCTAAATAGTCCAGGCAAGGTCCTGCCTGAACC  300
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CTCTGCATATACCAACCTCTAAATAGTCCAGGCAAGGTCCTG-CTGAACC  272

seq1  TCACTGGTGCTGATGATACCGAAGAGGAAGCTACATTCTGGTCACCTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGGTGCTGATGATACCGAAGAGGAAGCTACATTCTGGTCACCTGTG  322

seq1  TTTCTGAATGGCCCCTTGGTACTATGAACAACGGATGTGCCTGGGAATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGAATGGCCCCTTGGTACTATGAACAACGGATGTGCCTGGGAATCT  372

seq1  TCACAAGTAGGATCCCATTTCATCCCCCAGCAGAATCTTCACAGACATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAGTAGGATCCCATTTCATCCCCCAGCAGAATCTTCACAGACATCA  422

seq1  CAAGTGTAAGAAAGCTCAGAGCTGGGATTTCCACCTCTGCTCAGTGAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGTAAGAAAGCTCAGAGCTGGGATTTCCACCTCTGCTCAGTGAGGG  472

seq1  GCTGTGCTGTCCCTCCCGCCCCTGAAATGCTGACCGTGAAGAACTGCCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGCTGTCCCTCCCGCCCCTGAAATGCTGACCGTGAAGAACTGCCCC  522

seq1  ATCCAGGTGCTCCAGTGGGCATCTCTGGTTCCTCTGAGTGTGTCTTTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGGTGCTCCAGTGGGCATCTCTGGTTCCTCTGAGTGTGTCTTTCCT  572

seq1  TGAGTTCCTGATTTAGTTTTAGTTCTCCAATTGGCTGATACTGACCCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCCTGATTTAGTTTTAGTTCTCCAATTGGCTGATACTGACCCTTC  622

seq1  ACATTTGAATGTGAGTGGTTCTAGGGATTACCTGAGCTCTCTCGCCACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGAATGTGAGTGGTTCTAGGGATTACCTGAGCTCTCTCGCCACTC  672

seq1  TGAGGAGGTGAGAACGAGGGTGGCCAAGGCAACTATTAATGTGGAAACCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGGTGAGAACGAGGGTGGCCAAGGCAACTATTAATGTGGAAACCT  722

seq1  CAAGAAAGGGAATCTGAGGACATGGACCAAACCTACTGGGATGACTTTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAAGGGAATCTGAGGACATGGACCAAACCTACTGGGATGACTTTAT  772

seq1  CCTTGGAAGACAGGCCGCCTCTCTCTTCTGTTCTCTCCTAGCTGTTTGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGAAGACAGGCCGCCTCTCTCTTCTGTTCTCTCCTAGCTGTTTGTC  822

seq1  CTTGATCTGGTAGCTACATTCCTGCCTTTGATGTAGTTGTGTAGTGAAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATCTGGTAGCTACATTCCTGCCTTTGATGTAGTTGTGTAGTGAAGC  872

seq1  ATCCTCCCTGTTCATCTATGAGTTTCTTTTGTGTTGTGTTTATGATTTAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCCCTGTTCATCTATGAGTTTCTTTTGTGTTGTGTTTATGATTTAT  922

seq1  TCAACTTGATGTAGGGTGATTGTGTCCAGTAAAAGACCCACAGCTAGTGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTTGATGTAGGGTGATTGTGTCCAGTAAAAGACCCACAGCTAGTGT  972

seq1  GCCATGAAGGGACAAACAGAAACATCCCATTATCTGGAATTGAGGCTCTA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGAAGGGACAAACAGAAACATCCCATTATCTGGAATTGAGGCTCTA  1022

seq1  AAAGTATATGCCTTACCCATTCCCCAAACCAGCGTCTACCTGGGGTGGGG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATATGCCTTACCCATTCCCCAAACCAGCGTCTACCTGGGGTGGGG  1072

seq1  GGTGTTTTCAACTGCTCTAGGCTAGAATACTTTCTTGGTTATGTGGCTGG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTTCAACTGCTCTAGGCTAGAATACTTTCTTGGTTATGTGGCTGG  1122

seq1  TTTGGATTATTAAAATGACCTTTGAAAGAATTC  1183
      |||||||||||||||||||||||||||||||||
seq2  TTTGGATTATTAAAATGACCTTTGAAAGAATTC  1155

seq1: chr7_74387118_74388007
seq2: B6Ng01-141J01.g_68_965

seq1  GAATTCCAGGGAACTGCGTTTCTGATTCTTCCCTGCATTCTGAACTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGAACTGCGTTTCTGATTCTTCCCTGCATTCTGAACTGATT  50

seq1  TCATTTTTAGATGCTGAATTAGCTTAAACTTTTTTAAAGAACAATTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTTAGATGCTGAATTAGCTTAAACTTTTTTAAAGAACAATTTTTT  100

seq1  ATTAGATATTTTCTTCATTTACAATTCAAATGCTATCCCAAAAGTCCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGATATTTTCTTCATTTACAATTCAAATGCTATCCCAAAAGTCCCCT  150

seq1  ATACCCTCCCAACCCCCTGCCCTGCCCTCCAACCCACCCACTCCCACTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCTCCCAACCCCCTGCCCTGCCCTCCAACCCACCCACTCCCACTTC  200

seq1  CTGGCCCTGGCATTACCCTGTACTGAGGCATATAAAGTTTGCACGACCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCCTGGCATTACCCTGTACTGAGGCATATAAAGTTTGCACGACCAA  250

seq1  GGGGCCTCTCTTCCCAATGATGTCCGACTAGGCCATTTTCTGCTACACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCCTCTCTTCCCAATGATGTCCGACTAGGCCATTTTCTGCTACACAT  300

seq1  GCAGCTAGAGACACGAGCTCAGGGTGTACTGGTTAGTTCATATTGTTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTAGAGACACGAGCTCAGGGTGTACTGGTTAGTTCATATTGTTGTT  350

seq1  CCACCTATAGGGCTGCAGACCCCTTCAGCTCCTTGGGTACTTTCTCTAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTATAGGGCTGCAGACCCCTTCAGCTCCTTGGGTACTTTCTCTAGA  400

seq1  TCCTCCATTGGGGGCCCTGTTTTCCATCCAATAGCTGACTGTGAGCATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCATTGGGGGCCCTGTTTTCCATCCAATAGCTGACTGTGAGCATCC  450

seq1  ACTTCTGTATTTGCCAGGCACTGGCATAGCCTCACAAGAGACAGCTATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTGTATTTGCCAGGCACTGGCATAGCCTCACAAGAGACAGCTATAT  500

seq1  TAGGGTCATGTCAGCAAAATCTTGCTGGCATATGCAATAGTGTCTGCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTCATGTCAGCAAAATCTTGCTGGCATATGCAATAGTGTCTGCATT  550

seq1  TGGTGGCTGATTATGGTATGGATGCCCCGGGTGGGGCAGTCGCAGTCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGCTGATTATGGTATGGATGCCCCGGGTGGGGCAGTCGCAGTCTCT  600

seq1  GGATGCTCCTTCCTTCCTTCCGTCTCAGCTCCAAACTTTGTCTCTGTAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCTCCTTCCTTCCTTCCGTCTCAGCTCCAAACTTTGTCTCTGTAAC  650

seq1  TCCTTCCATGGGTG-TTTATGAAGTTGTAAAGAGTGTGATTGACTACACT  699
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TCCTTCCATGGGTGTTTTATGAAGTTGTAAAGAGTGTGATTGACTACACT  700

seq1  TTTTAGCGATC-TTTCTTATC-TTCATGATTTCTACATTTCAACACACTC  747
      ||||||||||| ||||||||| ||||||||||| ||||||||||||||||
seq2  TTTTAGCGATCTTTTCTTATCTTTCATGATTTCCACATTTCAACACACTC  750

seq1  AGAAA-CTATCTCTGAGATTCTGCAGTTAAGTGTCATTTTAAGGAAGGCA  796
      ||||| |||||||||||||||||  ||| |||||||||||||||||||||
seq2  AGAAACCTATCTCTGAGATTCTGTCGTTTAGTGTCATTTTAAGGAAGGCA  800

seq1  AAGTCACACAGTGTCACACATTGGTATGACAGGTGG-AGAAACAG-TTCA  844
      |||||||||||||||||||||||||||||||||||| | |||||| || |
seq2  AAGTCACACAGTGTCACACATTGGTATGACAGGTGGAAAAAACAGTTTAA  850

seq1  GGC-TCAGCACTGAGTCAACAATTTCAAT-GAGTTTTTGAGGGAGAGA  890
      ||| ||| ||||||   || ||||||||| || ||||| |||||||||
seq2  GGCTTCATCACTGATGTAATAATTTCAATGGATTTTTTAAGGGAGAGA  898