BAC Information

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BAC

Clone NameB6Ng01-142A01
Chromosome7 (Build37)
Map Location 67,508,280 - 67,617,856
singlet/doubletdoublet
Overlap genenone
Upstream geneUbe3a, LOC100040985, LOC100041010, LOC100041029, LOC100041051, Pwcr1, LOC664788, Snrpn, Snurf, EG664849
Downstream geneLOC100041201, LOC100041211, LOC664896, LOC100041229, LOC625287, D0Kist2, LOC100041248, LOC100041259, EG664943
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-142A01.bB6Ng01-142A01.g
ACCDH940312DH940313
length9651,164
definitionDH940312|Mus musculus domesticus DNA, BAC clone: B6Ng01-142A01, 5' end.DH940313|Mus musculus domesticus DNA, BAC clone: B6Ng01-142A01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,617,246 - 67,617,856)(67,508,280 - 67,509,463)
sequence
gaattcatttatagccaaagggcattgaagggccagtgggtagaaaatta
ttgaatactgaggaagactgtctcaagaaggatcagagtgataagatatc
atcttgaaagagggagggatgagaaatatattcagatgagtatgatggtg
gattatttcacattgaaaatggtccttattaaggtagaatttaaagtgaa
agtacatacataacataaaaatatcctgtataaaatttaactgtggaaag
aatgtcatttttaggacatttaagaggcttgttgttgttgttcttattgt
ttctgcatttttcattattaattacttttattacatttcaaactttgtcc
ccttcccagtctcccctgtgttacccctcacctcattgccctcccatttt
cctctaagagtatgctgccccacccactcactaagcacctcacccctcta
gcatctccctttgatgaggcaacaaacctccacaggaccaagagtctccc
ctcccaatgatgccagataagtcagtcctccactaaatatatagccagag
ccatggactgactcatgtatactctttggttgtggtttagtccttgggag
ctctgaggcatctggttagtagatactgttgttcttcctatagggttaca
ttccccttcagctccttcagaccttcccctaactcttccattggggtgcc
caggctcattcccatggttggctgtaagtatctacatctgtcttagtcag
gtgctagaagagtatctcagaagacagctataccaaactcctatctgtaa
gcacttcttggcatcagcaacccagatgcccttcaatggaagaatggata
cagaaatgtggtactgtacacaataaaatactactcagctattagaatca
atgacttcagaattttgcagataatggttggaactaaaatattatcccaa
gtgagataacccaga
gaattcaatgactatgtaacatgggcactagaagagttgtagcaaagtga
aattaatagatctcaaaattgacccaaagagcagggtacattactgtgta
cttactgtttttgtttctctccagagatctctaattttatatgctcaatt
tttccaaaaactcactcattcacataccagagaagtctagtttgcatgtg
acaatgatttaactcatgtgtcttgagattttaattgtatctgaatatta
gaggcctctcattcttcctcctcctctttacttaatttttccttttgttc
actccttctttatgtttggaactttgagaaagaatctcattctgtatcca
aggatagtatcaaacatttagtaatcattttgtttatatctcttgaatta
tatggttacaaatgtaagccaatatacaatgattttttttcattttaaat
gtgcatttggctttaatcattaattatatttacaattaatattttagtga
aaaagtccaggcatcatggcacatatatttaagccatatatagagagtgc
atattgtgtttaactacagccaggattacatttttgaaccctgtattaac
aataaaatataaataataaaattaaaattatagtagcaaaagattatgtc
cagtctttctctatttgagtggcaagcagatggttgctgaagtagcagct
tatatctcaaaccacagagaggaagaagagagaatgctttgaaacatcat
gagatttttgaaagatagaaagctatccccagggatatcttttgtccagc
aatgctgcatcttctaatcttccccaaacagccatcaactaggagtcaag
tatttgaaaattcgagacaaatagtgggcatctcattcaaaacactgcac
tgtacaccttattatcaccagtctcacaaccatatcataataaaattgta
tactgtaaaactttaaagagctcatcatcttccagagaatgataatgttt
aaagttcaaagtgtctcctgagcttcagtcaattgttctatgtactctat
taaatcaaagcaagtacatttctccagcactaacggcaagatctctatta
cctctctctgcatgactcaggctgtctgagaatgctaaggtgactataag
ctcacttttcttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_67617246_67617856
seq2: B6Ng01-142A01.b_41_651 (reverse)

seq1  ATGCCTCAGAGCTCCCAAGGACTAAACCACAACCAAAGAGTATACATGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTCAGAGCTCCCAAGGACTAAACCACAACCAAAGAGTATACATGAG  50

seq1  TCAGTCCATGGCTCTGGCTATATATTTAGTGGAGGACTGACTTATCTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCCATGGCTCTGGCTATATATTTAGTGGAGGACTGACTTATCTGGC  100

seq1  ATCATTGGGAGGGGAGACTCTTGGTCCTGTGGAGGTTTGTTGCCTCATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTGGGAGGGGAGACTCTTGGTCCTGTGGAGGTTTGTTGCCTCATCA  150

seq1  AAGGGAGATGCTAGAGGGGTGAGGTGCTTAGTGAGTGGGTGGGGCAGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGATGCTAGAGGGGTGAGGTGCTTAGTGAGTGGGTGGGGCAGCAT  200

seq1  ACTCTTAGAGGAAAATGGGAGGGCAATGAGGTGAGGGGTAACACAGGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTAGAGGAAAATGGGAGGGCAATGAGGTGAGGGGTAACACAGGGGA  250

seq1  GACTGGGAAGGGGACAAAGTTTGAAATGTAATAAAAGTAATTAATAATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGGAAGGGGACAAAGTTTGAAATGTAATAAAAGTAATTAATAATGA  300

seq1  AAAATGCAGAAACAATAAGAACAACAACAACAAGCCTCTTAAATGTCCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGCAGAAACAATAAGAACAACAACAACAAGCCTCTTAAATGTCCTA  350

seq1  AAAATGACATTCTTTCCACAGTTAAATTTTATACAGGATATTTTTATGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGACATTCTTTCCACAGTTAAATTTTATACAGGATATTTTTATGTT  400

seq1  ATGTATGTACTTTCACTTTAAATTCTACCTTAATAAGGACCATTTTCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGTACTTTCACTTTAAATTCTACCTTAATAAGGACCATTTTCAAT  450

seq1  GTGAAATAATCCACCATCATACTCATCTGAATATATTTCTCATCCCTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAATAATCCACCATCATACTCATCTGAATATATTTCTCATCCCTCCC  500

seq1  TCTTTCAAGATGATATCTTATCACTCTGATCCTTCTTGAGACAGTCTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCAAGATGATATCTTATCACTCTGATCCTTCTTGAGACAGTCTTCC  550

seq1  TCAGTATTCAATAATTTTCTACCCACTGGCCCTTCAATGCCCTTTGGCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTATTCAATAATTTTCTACCCACTGGCCCTTCAATGCCCTTTGGCTA  600

seq1  TAAATGAATTC  611
      |||||||||||
seq2  TAAATGAATTC  611

seq1: chr7_67508280_67509463
seq2: B6Ng01-142A01.g_65_1228

seq1  GAATTCAATGACTATGTAACATGGGCACTAGAAGAGTTGTAGCAAAGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGACTATGTAACATGGGCACTAGAAGAGTTGTAGCAAAGTGA  50

seq1  AATTAATAGATCTCAAAATTGACCCAAAGAGCAGGGTACATTACTGTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATAGATCTCAAAATTGACCCAAAGAGCAGGGTACATTACTGTGTA  100

seq1  CTTACTGTTTTTGTTTCTCTCCAGAGATCTCTAATTTTATATGCTCAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTGTTTTTGTTTCTCTCCAGAGATCTCTAATTTTATATGCTCAATT  150

seq1  TTTCCAAAAACTCACTCATTCACATACCAGAGAAGTCTAGTTTGCATGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAAAAACTCACTCATTCACATACCAGAGAAGTCTAGTTTGCATGTG  200

seq1  ACAATGATTTAACTCATGTGTCTTGAGATTTTAATTGTATCTGAATATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGATTTAACTCATGTGTCTTGAGATTTTAATTGTATCTGAATATTA  250

seq1  GAGGCCTCTCATTCTTCCTCCTCCTCTTTACTTAATTTTTCCTTTTGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCTCTCATTCTTCCTCCTCCTCTTTACTTAATTTTTCCTTTTGTTC  300

seq1  ACTCCTTCTTTATGTTTGGAACTTTGAGAAAGAATCTCATTCTGTATCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTTCTTTATGTTTGGAACTTTGAGAAAGAATCTCATTCTGTATCCA  350

seq1  AGGATAGTATCAAACATTTAGTAATCATTTTGTTTATATCTCTTGAATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAGTATCAAACATTTAGTAATCATTTTGTTTATATCTCTTGAATTA  400

seq1  TATGGTTACAAATGTAAGCCAATATACAATGATTTTTTTTCATTTTAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTTACAAATGTAAGCCAATATACAATGATTTTTTTTCATTTTAAAT  450

seq1  GTGCATTTGGCTTTAATCATTAATTATATTTACAATTAATATTTTAGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATTTGGCTTTAATCATTAATTATATTTACAATTAATATTTTAGTGA  500

seq1  AAAAGTCCAGGCATCATGGCACATATATTTAAGCCATATATAGAGAGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTCCAGGCATCATGGCACATATATTTAAGCCATATATAGAGAGTGC  550

seq1  ATATTGTGTTTAACTACAGCCAGGATTACATTTTTGAACCCTGTATTAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGTGTTTAACTACAGCCAGGATTACATTTTTGAACCCTGTATTAAC  600

seq1  AATAAAATATAAATAATAAAATTAAAATTATAGTAGCAAAAGATTATGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATATAAATAATAAAATTAAAATTATAGTAGCAAAAGATTATGTC  650

seq1  CAGTCTTTCTCTATTTGAGTGGCAAGCAGATGGTTGCTGAAGTAGCAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTTCTCTATTTGAGTGGCAAGCAGATGGTTGCTGAAGTAGCAGCT  700

seq1  TATATCTCAAACCACAGAGAGGAAGAAGAGAGAATGCTTTGAAACATCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTCAAACCACAGAGAGGAAGAAGAGAGAATGCTTTGAAACATCAT  750

seq1  GAGATTTTTGAAAGATAGAAAGCTATCCCCAGGGATATCTTTTGTCCAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTTTTGAAAGATAGAAAGCTATCCCCAGGGATATCTTTTGTCCAGC  800

seq1  AATGCTGCATCTTCTAATCTTCCCCAAACAGCCATCAACTAGGAGTCAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTGCATCTTCTAATCTTCCCCAAACAGCCATCAACTAGGAGTCAAG  850

seq1  TATTTGAAAATTCGAGACAAATAGTGGGCATCTCATTCAAAACACTGCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGAAAATTCGAGACAAATAGTGGGCATCTCATTCAAAACACTGCAC  900

seq1  TGTACACCTTATTATCA-CAGTCTCACAACCATATCATAATAAAATTGTA  949
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TGTACACCTTATTATCACCAGTCTCACAACCATATCATAATAAAATTGTA  950

seq1  TACTGTAAAACTTTAAAAGAGCTCATCATCTTTCAGAGAATGAATAATGT  999
      |||||||||||||| ||||||||||||||||| ||||||||| |||||||
seq2  TACTGTAAAACTTT-AAAGAGCTCATCATCTTCCAGAGAATG-ATAATGT  998

seq1  TTAAAAGTTCAAAGTGTCTTCTGAGCCTCAAGTCAATATGTTCTATGTAA  1049
      || |||||||||||||||| |||||| || ||||||| |||||||||| |
seq2  TT-AAAGTTCAAAGTGTCTCCTGAGCTTC-AGTCAAT-TGTTCTATGT-A  1044

seq1  CTCCTATAAAATCAAAAGCAAGTTACATTTCTCCAGCACATAACGGCACA  1099
      || |||| ||||| |||||||| |||||||||||||||| |||||||| |
seq2  CT-CTATTAAATC-AAAGCAAG-TACATTTCTCCAGCAC-TAACGGCA-A  1089

seq1  GATCTCATATTACCTCTACTCTGCAATGGACTCAGGCTGTCCTGAGAAAT  1149
      |||||| |||||||||| |||||||   |||||||||||| ||||| |||
seq2  GATCTC-TATTACCTCT-CTCTGCA--TGACTCAGGCTGT-CTGAG-AAT  1133

seq1  GCTTAGGTTGACTTTAAGCTTCAACTTTTTCTTCC  1184
      ||| ||| ||||| ||||| |||   |||||||||
seq2  GCTAAGG-TGACTATAAGC-TCA--CTTTTCTTCC  1164