BAC Information

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BAC

Clone NameB6Ng01-142E24
Chromosome7 (Build37)
Map Location 134,182,310 - 134,291,084
singlet/doubletdoublet
Overlap geneKif22, 1810010M01Rik, AI467606, Qprt, Spn
Upstream geneGsg1l, Xpo6, Sbk1, LOC100043495, Lat, 2210013K02Rik, Nfatc2ip, Cd19, Rabep2, Atp2a1, Sh2b1, Tufm, Atxn2l, Eif3s8, Cln3, Apob48r, Il27, Nupr1, Ccdc101, Sult1a1, LOC629029, Giyd2, Bola2, Coro1a, Snrp1c-ps1, LOC100043044, Mapk3, Gdpd3, Ypel3, Tbx6, Ppp4c, Aldoa, 1500016O10Rik, 4930451I11Rik, Doc2a, Ccdc95, Hirip3, 1110032O16Rik, Kctd13, A830007L07Rik, Sez6l2, D830044I16Rik, Cdipt, Mvp, 2900092E17Rik, Maz
Downstream geneCd2bp2, Tbc1d10b, Mylpf, Sept1, LOC100043580, Zfp553, Zfp771, 2410015N17Rik, Sephs2, Itgal, Zfp768, LOC100043097, LOC100043589, 6430604K15Rik, 9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764, Zfp688, Zfp689, Prr14, Fbs1, 1700008J07Rik, LOC100043597, D030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus, Pycard, Trim72, LOC436010, EG668675, Itgam, Itgax
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-142E24.bB6Ng01-142E24.g
ACCDH940540DH940541
length1,176736
definitionDH940540|Mus musculus domesticus DNA, BAC clone: B6Ng01-142E24, 5' end.DH940541|Mus musculus domesticus DNA, BAC clone: B6Ng01-142E24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,289,923 - 134,291,084)(134,182,310 - 134,183,039)
sequence
gaattccacacacaccccatcatccttaaatctctctcaggtacagccct
gagttgtattttgaactttatttatttatttttgagagcttttttttttt
tttttttttttttttttgtagccctggttttcctagtacgctctctgtag
accaggctagcctagaattcaaagctttacctgcttctgtctcttgagtg
ctgggattaagtgtgtaccaccactgccctgtgactttaagcaatttaaa
cagagacaggagactgcaattctgaccgcttgggcagatggaagacttat
acagcaaaaatattgtcaggattatttttctttcctggctgtcctggaac
tagatttatagaccaaactggccttgaatgcagatcctgcctctgccttt
aagtgctaggattaaagcatgtgtcacaatacctggctgcaggattattt
aagtgcccctgggctgttcctttggagtgcttgctacccaggtccattct
acccaccaggcaggattatgcttttcttggtaggagggcaggggacttaa
aagattgaccaggacttaatggaggctgtgaccctgtgctgccccccttg
agctgccccctagaggaatgttctttgaactgggatagttgtattctact
ttgtgtaccttaatgttttcccaaaagaatttattaataggtcctctatt
aacatcggttttcctgaatcttgtggccgtgtatataggttcctgtggag
aactggtgttaacggcctctgttcttctcaatcacctcccctcccataag
ggcatcctcccccttcccacccccatcataaaggcgtatgtgggcaaagc
catcttggagaagggtgacaattgaaatcaccctgtgagaaggggggaac
atccagacaatcttgaagtgaaaggccttttcaataagccaagcaggcag
tgcaaatcctctgaaggctcctgcacttcccaggaaacaaaggtggaagg
tctgtgggtggtatccttcgttgtcagctttgctgggagaaggagtcacc
taggaaacaagcccttgaaccacaaggagagctattccagtcaaggcaat
ttctgaaactcttccctggtggttatgctagttgggcaaggtgaagactt
accgactaaacctgaggagggatgca
gaattcaaaacccagcacacttgtgagacaagtttcccagccatccattt
ccctggttatcttattagttttcctgactattcctcagtttagcaatctt
aattaaatgctttccctatgtcccatcctctgtcaacttttgtattacta
gcattctgagttgtatagttctttgtttcgaggctgtcacactgtaaact
gttcaaccccggtagcactctccttattcacctccaagttgtaatgagca
aaccgtctccagacgcttccacatgttcactggggtacaaacgtccctag
gtgagatagctcagattcacttcacaggcacagtcacctgctctcttggc
accaattatcttttgttccttttaaaaatattatcttcacccgggtggtg
gtggtgcacgcctttaatcccagcactcgggcgggaggcagaggcaggag
gattttctgagtttgaggccagtctggtctacacagtgagttccaggaca
gcagggctatacagagaaaccctgtcttgaaaaaccggaaaaaaaaaaca
caaaaaaacaaaccatcttcaagttgatgactcctcctttagcacttcct
attaaagagctgtctctgggctgggcagagcttccgcccaagctaccatc
tagcttctcctggatgttcttaggtacctcaaaattcaactgtactaaaa
ctcttcccttgcccatctctgcaactgtttcctcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_134289923_134291084
seq2: B6Ng01-142E24.b_47_1222 (reverse)

seq1  TGCATCCCTCCCTTAGGGTTCTGGTCCGCTA-TGCTCA-CTTGCCCTACT  48
      ||||||||| ||| |||  | | ||| |  | |  ||| ||||||| || 
seq2  TGCATCCCT-CCTCAGG--TTTAGTCGGTAAGTCTTCACCTTGCCCAAC-  46

seq1  TAGCATAACCCAACAGG--AGAG-GTCAGAAATTTGCCTGACCTGGATAG  95
      |||||||| ||| ||||  ||||  |||||||||  | ||||  | ||||
seq2  TAGCATAA-CCACCAGGGAAGAGTTTCAGAAATTGCCTTGACTGGAATAG  95

seq1  CTCTCCTGTGT-GTCCAAAGGCTTGTTTCCTAGGTGACTCCATCTCCCAG  144
      ||||||| ||| || ||| |||||||||||||||||||||| ||||||||
seq2  CTCTCCT-TGTGGTTCAAGGGCTTGTTTCCTAGGTGACTCCTTCTCCCAG  144

seq1  C-AAGCTGACAACGAAGGGTAACCACCACAGACC-TCCA-CTTTGTTCCT  191
      | |||||||||||||||| || |  ||||||||| |||| ||||||| | 
seq2  CAAAGCTGACAACGAAGGATACCACCCACAGACCTTCCACCTTTGTTTCC  194

seq1  GGGGAAGTGCAGGAGCC-TCAGGGGATTTGCACTGCCTGCTTGGCCTATC  240
       |||||||||||||||| |||| |||||||||||||||||||||| ||| 
seq2  TGGGAAGTGCAGGAGCCTTCAGAGGATTTGCACTGCCTGCTTGGCTTATT  244

seq1  G-AAAGGCCTTTCACT--CAGA-TGTCTGGATGGT-CCCCCATCTCACAG  285
      | ||||||||||||||   ||| |||||||||| | ||||| ||||||||
seq2  GAAAAGGCCTTTCACTTCAAGATTGTCTGGATGTTCCCCCCTTCTCACAG  294

seq1  GGTGA-TTCAATTGTCACCC-TCTCCAAGATGGCTTTGCCCACATACGCC  333
      ||||| |||||||||||||| |||||||||||||||||||||||||||||
seq2  GGTGATTTCAATTGTCACCCTTCTCCAAGATGGCTTTGCCCACATACGCC  344

seq1  TTATGTATG--GGGGGTGGGGAGGGGGAGGATGGCCTTATGGGA-GGGAG  380
      ||   ||||  ||||||||| |||||||||||| |||||||||| |||||
seq2  TT---TATGATGGGGGTGGGAAGGGGGAGGATGCCCTTATGGGAGGGGAG  391

seq1  GTGATTGAG-AGGACAGAGGCCGTCAACACCAGGTCTCCACAGGAACCTA  429
      ||||||||| || ||||||||||| |||||||| ||||||||||||||||
seq2  GTGATTGAGAAGAACAGAGGCCGTTAACACCAGTTCTCCACAGGAACCTA  441

seq1  TATACACGGGCACAAGATTCAGGAAAACCGATGTT-ATAGAGGACCTACT  478
      ||||||||| ||||||||||||||||||||||||| |||||||||||| |
seq2  TATACACGGCCACAAGATTCAGGAAAACCGATGTTAATAGAGGACCTATT  491

seq1  AATAAACTCCTTTAGG-AAACATTAAGGTACACAAAGTAGAATACAACTA  527
      |||||| || ||| || |||||||||||||||||||||||||||||||||
seq2  AATAAATTCTTTTGGGAAAACATTAAGGTACACAAAGTAGAATACAACTA  541

seq1  TCCCAGTTCAAAGAACAGTCCTCTAGGGGGCAGCTCAAGGGGGGCAGCAC  577
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TCCCAGTTCAAAGAACATTCCTCTAGGGGGCAGCTCAAGGGGGGCAGCAC  591

seq1  AGGGTCACAGCCTCCATTAAGTCCTGGTCAATCTTTTAAGTCCCCTGCCC  627
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCACAGCCTCCATTAAGTCCTGGTCAATCTTTTAAGTCCCCTGCCC  641

seq1  TCCTACCAAGAAAAGCATAATCCTGCCTGGTGGGTAGAATGGACCTGGGT  677
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACCAAGAAAAGCATAATCCTGCCTGGTGGGTAGAATGGACCTGGGT  691

seq1  AGCAAGCACTCCAAAGGAACAGCCCAGGGGCACTTAAATAATCCTGCAGC  727
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGCACTCCAAAGGAACAGCCCAGGGGCACTTAAATAATCCTGCAGC  741

seq1  CAGGTATTGTGACACATGCTTTAATCCTAGCACTTAAAGGCAGAGGCAGG  777
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTATTGTGACACATGCTTTAATCCTAGCACTTAAAGGCAGAGGCAGG  791

seq1  ATCTGCATTCAAGGCCAGTTTGGTCTATAAATCTAGTTCCAGGACAGCCA  827
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCATTCAAGGCCAGTTTGGTCTATAAATCTAGTTCCAGGACAGCCA  841

seq1  GGAAAGAAAAATAATCCTGACAATATTTTTGCTGTATAAGTCTTCCATCT  877
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGAAAAATAATCCTGACAATATTTTTGCTGTATAAGTCTTCCATCT  891

seq1  GCCCAAGCGGTCAGAATTGCAGTCTCCTGTCTCTGTTTAAATTGCTTAAA  927
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAGCGGTCAGAATTGCAGTCTCCTGTCTCTGTTTAAATTGCTTAAA  941

seq1  GTCACAGGGCAGTGGTGGTACACACTTAATCCCAGCACTCAAGAGACAGA  977
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAGGGCAGTGGTGGTACACACTTAATCCCAGCACTCAAGAGACAGA  991

seq1  AGCAGGTAAAGCTTTGAATTCTAGGCTAGCCTGGTCTACAGAGAGCGTAC  1027
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGTAAAGCTTTGAATTCTAGGCTAGCCTGGTCTACAGAGAGCGTAC  1041

seq1  TAGGAAAACCAGGGCTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCTC  1077
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAAACCAGGGCTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCTC  1091

seq1  TCAAAAATAAATAAATAAAGTTCAAAATACAACTCAGGGCTGTACCTGAG  1127
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAATAAATAAATAAAGTTCAAAATACAACTCAGGGCTGTACCTGAG  1141

seq1  AGAGATTTAAGGATGATGGGGTGTGTGTGGAATTC  1162
      |||||||||||||||||||||||||||||||||||
seq2  AGAGATTTAAGGATGATGGGGTGTGTGTGGAATTC  1176

seq1: chr7_134182310_134183039
seq2: B6Ng01-142E24.g_66_801

seq1  GAATTCAAAACCCAGCACACTTGTGAGACAAGTTTCCCAGCCATCCATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAACCCAGCACACTTGTGAGACAAGTTTCCCAGCCATCCATTT  50

seq1  CCCTGGTTATCTTATTAGTTTTCCTGACTATTCCTCAGTTTAGCAATCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGTTATCTTATTAGTTTTCCTGACTATTCCTCAGTTTAGCAATCTT  100

seq1  AATTAAATGCTTTCCCTATGTCCCATCCTCTGTCAACTTTTGTATTACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAATGCTTTCCCTATGTCCCATCCTCTGTCAACTTTTGTATTACTA  150

seq1  GCATTCTGAGTTGTATAGTTCTTTGTTTCGAGGCTGTCACACTGTAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCTGAGTTGTATAGTTCTTTGTTTCGAGGCTGTCACACTGTAAACT  200

seq1  GTTCAACCCCGGTAGCACTCTCCTTATTCACCTCCAAGTTGTAATGAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAACCCCGGTAGCACTCTCCTTATTCACCTCCAAGTTGTAATGAGCA  250

seq1  AACCGTCTCCAGACGCTTCCACATGTTCACTGGGGTACAAACGTCCCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGTCTCCAGACGCTTCCACATGTTCACTGGGGTACAAACGTCCCTAG  300

seq1  GTGAGATAGCTCAGATTCACTTCACAGGCACAGTCACCTGCTCTCTTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGATAGCTCAGATTCACTTCACAGGCACAGTCACCTGCTCTCTTGGC  350

seq1  ACCAATTATCTTTTGTTCCTTTTAAAAATATTATCTTCACCCGGGTGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATTATCTTTTGTTCCTTTTAAAAATATTATCTTCACCCGGGTGGTG  400

seq1  GTGGTGCACGCCTTTAATCCCAGCACTCGGGCGGGAGGCAGAGGCAGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGCACGCCTTTAATCCCAGCACTCGGGCGGGAGGCAGAGGCAGGAG  450

seq1  GA-TTTCTGAGTTTGAGGCCAGTCTGGTCTACACAGTGAGTTCCAGGACA  499
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCTGAGTTTGAGGCCAGTCTGGTCTACACAGTGAGTTCCAGGACA  500

seq1  GCAGGGCTATACAGAGAAACCCTGTCTTGAAAAACCGG-AAAAAAAAACA  548
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GCAGGGCTATACAGAGAAACCCTGTCTTGAAAAACCGGAAAAAAAAAACA  550

seq1  CAAAAAAACAAACCATCTTCAAGTTGATGACTCCTCC-TTAGCACTTCCT  597
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CAAAAAAACAAACCATCTTCAAGTTGATGACTCCTCCTTTAGCACTTCCT  600

seq1  ATTAAAGAGCTGTCTCT-GGCT-GGCAGAGCTTCCGCCCAAGCTACCATC  645
      ||||||||||||||||| |||| |||||||||||||||||||||||||||
seq2  ATTAAAGAGCTGTCTCTGGGCTGGGCAGAGCTTCCGCCCAAGCTACCATC  650

seq1  TAGCTTCTCCTGGATGTTCTTAGGTACCTCAAATTCCACCTGTACT-AAA  694
      ||||||||||||||||||||||||||||||||| | || ||||||| |||
seq2  TAGCTTCTCCTGGATGTTCTTAGGTACCTCAAAATTCAACTGTACTAAAA  700

seq1  CTCTTCCCTTGCCCATCTCTGCAACTGTTTCCTCAC  730
      ||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCCTTGCCCATCTCTGCAACTGTTTCCTCAC  736