BAC Information

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BAC

Clone NameB6Ng01-142I01
Chromosome7 (Build37)
Map Location 145,223,155 - 145,224,171
singlet/doubletsinglet
Overlap geneLOC435235
Upstream geneMgmt, EG621804, Ebf3, 9430038I01Rik, Txnl2
Downstream geneTcerg1l, LOC100043290, Mapk1ip1, Ppp2r2d, Bnip3, EG668784, LOC669185, 6330417G02Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-142I01.bB6Ng01-142I01.g
ACCDH940686DH940687
length1,005136
definitionDH940686|Mus musculus domesticus DNA, BAC clone: B6Ng01-142I01, 5' end.DH940687|Mus musculus domesticus DNA, BAC clone: B6Ng01-142I01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctggtccactggaagagtagggatcttaactgctggagtgatctc
tccaaccccagttaggaactttaaaatgtggtatttttcctgtgatacag
ggcgaagtgtgaccttcccatccatccagaagtaaccaggagtgccagtc
acaagccttggattgatacagccccactttgtttagtttgaggccattgg
agaggcatataccatccaggaagtatgcagtatccagtaggtacatgttt
ctttttatgcatcgaaaggttttttgaatgtaattatatgcttttacagt
gtttgttagaaagcatctatttgttatcctggagcagaggttgtgaagta
tcaccctgcctataagactccccttatctgcacccagtggatccttgctt
ctcaagctgctaggcttactgctagcccagtaatgtcatagccccatctt
gttctcttttagaatccccagactttgaccacatttcctggtaagcaggc
tttgcctcggtccacaggattaatttccccaccgtgaagtaacagactca
ggaagacagaccgacaggcttctcctccacctcacctccgctcccatctg
ccttcctgcacccttcgacttgaggtgctcttccatctatagcccaacac
aaggtccaattcagtttctctgggatgaacttgagctagcagtctagcct
cttaggtgatgtagtaatgggcatgggggtgaatagcagaagcactgtat
ttattcagcatttccccctgaaatgtcttcatgattgaagaaggtaccgc
gaacccatcaaattcagcctgaagatgtagcaaggtgaatctcagagagt
cagtcatctacacctcgatttttactgcatggcttcagctggcctccctg
cctccacatctcgatcaatctgatttctgcttcactcagatttcttgtag
aaatagctcatttgcagttgccatgggatgagaacttctctacagagatg
catga
aggtcatcatgcttgcctagcaagcacctttacctgatgaaacatgtcgt
tgcctagagatagatagatagatagatagatagatagatagatagataga
tagatagatagatagattgattgatagatgggtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_145223155_145224171
seq2: B6Ng01-142I01.b_34_1038

seq1  GAATTCTGGTCCACTGGAAGAGTAGGGATCTTAACTGCTGGAGTGATCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGTCCACTGGAAGAGTAGGGATCTTAACTGCTGGAGTGATCTC  50

seq1  TCCAACCCCAGTTAGGAACTTTAAAATGTGGTATTTTTCCTGTGATACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACCCCAGTTAGGAACTTTAAAATGTGGTATTTTTCCTGTGATACAG  100

seq1  GGCGAAGTGTGACCTTCCCATCCATCCAGAAGTAACCAGGAGTGCCAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGAAGTGTGACCTTCCCATCCATCCAGAAGTAACCAGGAGTGCCAGTC  150

seq1  ACAAGCCTTGGATTGATACAGCCCCACTTTGTTTAGTTTGAGGCCATTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCCTTGGATTGATACAGCCCCACTTTGTTTAGTTTGAGGCCATTGG  200

seq1  AGAGGCATATACCATCCAGGAAGTATGCAGTATCCAGTAGGTACATGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCATATACCATCCAGGAAGTATGCAGTATCCAGTAGGTACATGTTT  250

seq1  CTTTTTATGCATCGAAAGGTTTTTTGAATGTAATTATATGCTTTTACAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTATGCATCGAAAGGTTTTTTGAATGTAATTATATGCTTTTACAGT  300

seq1  GTTTGTTAGAAAGCATCTATTTGTTATCCTGGAGCAGAGGTTGTGAAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTAGAAAGCATCTATTTGTTATCCTGGAGCAGAGGTTGTGAAGTA  350

seq1  TCACCCTGCCTATAAGACTCCCCTTATCTGCACCCAGTGGATCCTTGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCTGCCTATAAGACTCCCCTTATCTGCACCCAGTGGATCCTTGCTT  400

seq1  CTCAAGCTGCTAGGCTTACTGCTAGCCCAGTAATGTCATAGCCCCATCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGCTGCTAGGCTTACTGCTAGCCCAGTAATGTCATAGCCCCATCTT  450

seq1  GTTCTCTTTTAGAATCCCCAGACTTTGACCACATTTCCTGGTAAGCAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCTTTTAGAATCCCCAGACTTTGACCACATTTCCTGGTAAGCAGGC  500

seq1  TTTGCCTCGGTCCACAGGATTAATTTCCCCACCGTGAAGTAACAGACTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTCGGTCCACAGGATTAATTTCCCCACCGTGAAGTAACAGACTCA  550

seq1  GGAAGACAGACCGACAGGCTTCTCCTCCACCTCACCTCCGCTCCCATCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGACAGACCGACAGGCTTCTCCTCCACCTCACCTCCGCTCCCATCTG  600

seq1  CCTTCCTGCACCCTTCGACTTGAGGTGCTCTTCCATCTATAGCCCAACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTGCACCCTTCGACTTGAGGTGCTCTTCCATCTATAGCCCAACAC  650

seq1  AAGGTCCAATTCAGTTTCTCTGGGATGAACTTGAGCTAGCAGTCTAGCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCCAATTCAGTTTCTCTGGGATGAACTTGAGCTAGCAGTCTAGCCT  700

seq1  CTTAGGTGATGTAGTAATGGGCATGGGGGTGAAAAGCAGAAGCACTGTAT  750
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTTAGGTGATGTAGTAATGGGCATGGGGGTGAATAGCAGAAGCACTGTAT  750

seq1  TTATTCAGCATTTCCCCCTGAAAAGGTCTTCATGATTGAAGAAGGTACCG  800
      |||||||||||||||||||| ||| |||||||||||||||||||||||||
seq2  TTATTCAGCATTTCCCCCTG-AAATGTCTTCATGATTGAAGAAGGTACCG  799

seq1  CGAACCCATCAAATTCAGCCTGAAGATGTAGCAA-GTGAATCTCAGAGAG  849
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CGAACCCATCAAATTCAGCCTGAAGATGTAGCAAGGTGAATCTCAGAGAG  849

seq1  TCAGTCATCTAACACCTCGATTTTTACTGCAATGGCCTCCAGCTGGCCTC  899
      |||||||||| ||||||||||||||||||| |||| || |||||||||||
seq2  TCAGTCATCT-ACACCTCGATTTTTACTGC-ATGG-CTTCAGCTGGCCTC  896

seq1  CCTGCCTCCAACATCCTCAGATACAATCTGATTTTCCTGCTTCACTCAGG  949
      ||||||||| |||| ||| ||| |||||||||||  |||||||||||| |
seq2  CCTGCCTCC-ACAT-CTC-GAT-CAATCTGATTT--CTGCTTCACTCA-G  939

seq1  ATTTCTTGTAGAAATAGCTCATTTGCAAGTTGCCATGGGATGAGACCTTC  999
      |||||||||||||||||||||||||| |||||||||||||||||| ||||
seq2  ATTTCTTGTAGAAATAGCTCATTTGC-AGTTGCCATGGGATGAGAACTTC  988

seq1  TTCTACAGAGATGCATGA  1017
       |||||||||||||||||
seq2  -TCTACAGAGATGCATGA  1005