BAC Information

Click to search

BAC

Clone NameB6Ng01-143P24
Chromosome7 (Build37)
Map Location 151,789,837 - 151,934,540
singlet/doubletdoublet
Overlap geneTmem16a
Upstream geneTnfrsf26, Tnfrsf22, Tnfrsf23, Osbpl5, Mrgprg, Mrgpre, Nadsyn1, Dhcr7, Gm498, Shank2, Cttn, Ppfia1, Fadd
Downstream geneLOC669079, LOC677315, Fgf3, Fgf4, Fgf15, Oraov1, Ccnd1, 1810010D01Rik, LOC100040049, Tpcn2, Mrgprf, Mrgprd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143P24.bB6Ng01-143P24.g
ACCDH941790DH941791
length942331
definitionDH941790|Mus musculus domesticus DNA, BAC clone: B6Ng01-143P24, 5' end.DH941791|Mus musculus domesticus DNA, BAC clone: B6Ng01-143P24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,789,837 - 151,790,785)(151,934,210 - 151,934,540)
sequence
gaattcaacatggctggctttgaacttgtgacaattctcctgccccagct
tcccaaggatggcactgtaccatcatgtctggattattttattgtgtgtc
tgtgcatatatgtgcacatttgcatgggtgtacatgtgtgcatggggacc
agaagacactgtaaatgctagttttcaggtgtcaactacccttttcctat
ttcttttcttttcttttcttttcttttcttttcttttcttttcttttttc
ttttctcttctcttctcttttcccttcccttcccttcccttcccttccct
tcccttcccttctcttcttttcttttcttcttctttttttaagtagactc
tctcactgggacttggggctcatagtagcctaaactgactgtccaggaag
ctctagggaacctcctgcttttccctcctcagtgctaggattacaagcac
accaccactacccttggcttgttacaagggttctgggaactgaattcatt
tcttcatgtttgtgtagaaagcacttcatgtactgaggcatcttgccagc
tctacactgtgtaatttttatacttgtttataaatgtgctctggtcatgt
tcaccctgatatgactgctgagttacatgcatgcttgaagttcacaggtc
caatcttatgaaagatctgctcataagcagatcaagtgggcgcatggcct
ggcttggcccggcccatccctgtacccaaatctccctagggtcaagaaga
cctgctcccataacggttaaagatcccttcttttctcttccatcagccta
ggagaataggaggacatgtcttctgggactgtcccatctttttgtcccca
ggctcaccgttgctgttcaccagctctgggcttcatcagactagaaaccg
aattaacttgaattgaaacaggtcaagaaaatgtcatcgagg
tgtcacatggcctgtgtgtttgttgagtgactgacagctgctcaagcaga
atgagaggggactacttgactctgtagaaaaaaatatttttcttctgcca
tttttatttcccctcatccttcacctctccttttttcatttaagattcct
agatgacctgtgtcccaaatcccagatgtgggttataggagtggtggcat
gtgagcgtcctgggccttatgatgaccctcaggccggcctggcaggctgt
ggctgacttggagtccttggctatggaaactctgagcccctccttaggca
ggagggtggctacaagttcatcagctgtagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_151789837_151790785
seq2: B6Ng01-143P24.b_49_990

seq1  GAATTCAACATGGCTGGCTTTGAACTTGTGACAATTCTCCTGCCCCAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACATGGCTGGCTTTGAACTTGTGACAATTCTCCTGCCCCAGCT  50

seq1  TCCCAAGGATGGCACTGTACCATCATGTCTGGATTATTTTATTGTGTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGGATGGCACTGTACCATCATGTCTGGATTATTTTATTGTGTGTC  100

seq1  TGTGCATATATGTGCACATTTGCATGGGTGTACATGTGTGCATGGGGACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATATATGTGCACATTTGCATGGGTGTACATGTGTGCATGGGGACC  150

seq1  AGAAGACACTGTAAATGCTAGTTTTCAGGTGTCAACTACCCTTTTCCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGACACTGTAAATGCTAGTTTTCAGGTGTCAACTACCCTTTTCCTAT  200

seq1  TTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTTTC  250

seq1  TTTTCTCTTCTCTTCTCTTTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCTTCTCTTCTCTTTTCCCTTCCCTTCCCTTCCCTTCCCTTCCCT  300

seq1  TCCCTTCCCTTCTCTTCTTTTCTTTTCTTCTTCTTTTTTTAAGTAGACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCCCTTCTCTTCTTTTCTTTTCTTCTTCTTTTTTTAAGTAGACTC  350

seq1  TCTCACTGGGACTTGGGGCTCATAGTAGCCTAGACTGACTGTCCAGGAAG  400
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TCTCACTGGGACTTGGGGCTCATAGTAGCCTAAACTGACTGTCCAGGAAG  400

seq1  CTCTAGGGAACCTCCTGCTTTTCCCTCCTCAGTGCTAGGATTACAAGCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGGGAACCTCCTGCTTTTCCCTCCTCAGTGCTAGGATTACAAGCAC  450

seq1  ACCACCACTACCCTTGGCTTGTTACAAGGGTTCTGGGAACTGAATTCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCACTACCCTTGGCTTGTTACAAGGGTTCTGGGAACTGAATTCATT  500

seq1  TCTTCATGTTTGTGTAGAAAGCACTTCATGTACTGAGGCATCTTGCCAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATGTTTGTGTAGAAAGCACTTCATGTACTGAGGCATCTTGCCAGC  550

seq1  TCTACACTGTGTAATTTTTATACTTGTTTATAAATGTGCTCTGGTCATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACACTGTGTAATTTTTATACTTGTTTATAAATGTGCTCTGGTCATGT  600

seq1  TCACCCTGGTATGACTGCTGAGTTACATGCATGCTTGAAGTTCACAGGTC  650
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCTGATATGACTGCTGAGTTACATGCATGCTTGAAGTTCACAGGTC  650

seq1  CAATCTTATGAAATATCTGCTCATAGGCAGATCCAAGTGGGCGCATGGCC  700
      ||||||||||||| ||||||||||| |||||| |||||||||||||||||
seq2  CAATCTTATGAAAGATCTGCTCATAAGCAGAT-CAAGTGGGCGCATGGCC  699

seq1  TGGCTTGGCCCGGCCCATCCCTGTGCCCAAATCTCCCTAGGGTCAGGAAG  750
      |||||||||||||||||||||||| |||||||||||||||||||| ||||
seq2  TGGCTTGGCCCGGCCCATCCCTGTACCCAAATCTCCCTAGGGTCAAGAAG  749

seq1  ACCTGCTCCCATAACTGTTTAAAGAGTCCCTCTTTTCCTCTTCCATCAGG  800
      ||||||||||||||| | ||||||| |||||  ||| ||||||||||| |
seq2  ACCTGCTCCCATAAC-GGTTAAAGA-TCCCTTCTTTTCTCTTCCATCA-G  796

seq1  CCTAGGAGAGTAGGAGGACATGTCTTCTGGGACTGTCCCAGCCTTTTGTC  850
      ||||||||| |||||||||||||||||||||||||||||| | |||||||
seq2  CCTAGGAGAATAGGAGGACATGTCTTCTGGGACTGTCCCATCTTTTTGTC  846

seq1  CCCAGGCTTCACGTTGCTGTTCACCAGCTCTGGGCTTCTTCAGACCTAGA  900
      ||||||||   ||||||||||||||||||||||||||| ||||| |||||
seq2  CCCAGGCTCACCGTTGCTGTTCACCAGCTCTGGGCTTCATCAGA-CTAGA  895

seq1  AGCCGCAATCAACTTGAGTTGAAACAGGTCAGGAAAAGGTCATCAGAGG  949
      | ||| ||| ||||||| ||||||||||||| ||||| |||||| ||||
seq2  AACCG-AATTAACTTGAATTGAAACAGGTCAAGAAAATGTCATC-GAGG  942

seq1: chr7_151934210_151934540
seq2: B6Ng01-143P24.g_78_408 (reverse)

seq1  ACTACAGCTGATGAACTTGTAGCCACCCTCCTGCCTAAGGAGGGGCTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAGCTGATGAACTTGTAGCCACCCTCCTGCCTAAGGAGGGGCTCAG  50

seq1  AGTTTCCATAGCCAAGGACTCCAAGTCAGCCACAGCCTGCCAGGCCGGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCCATAGCCAAGGACTCCAAGTCAGCCACAGCCTGCCAGGCCGGCC  100

seq1  TGAGGGTCATCATAAGGCCCAGGACGCTCACATGCCACCACTCCTATAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGTCATCATAAGGCCCAGGACGCTCACATGCCACCACTCCTATAAC  150

seq1  CCACATCTGGGATTTGGGACACAGGTCATCTAGGAATCTTAAATGAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATCTGGGATTTGGGACACAGGTCATCTAGGAATCTTAAATGAAAAA  200

seq1  AGGAGAGGTGAAGGATGAGGGGAAATAAAAATGGCAGAAGAAAAATATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGGTGAAGGATGAGGGGAAATAAAAATGGCAGAAGAAAAATATTT  250

seq1  TTTTCTACAGAGTCAAGTAGTCCCCTCTCATTCTGCTTGAGCAGCTGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTACAGAGTCAAGTAGTCCCCTCTCATTCTGCTTGAGCAGCTGTCA  300

seq1  GTCACTCAACAAACACACAGGCCATGTGACA  331
      |||||||||||||||||||||||||||||||
seq2  GTCACTCAACAAACACACAGGCCATGTGACA  331